RNA–Protein interactions for RNA: ENST00000316673.8

HNF4A-202, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,470 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-202ENST00000316673 WNK3Q9BYP7 1800 aa20.43■□□□□ 0.86
HNF4A-202ENST00000316673 A0A0G2JS52 829 aa20.43■□□□□ 0.86
HNF4A-202ENST00000316673 FCHSD2O94868 740 aa20.43■□□□□ 0.86
HNF4A-202ENST00000316673 MYT1Q01538 1121 aa20.43■□□□□ 0.86
HNF4A-202ENST00000316673 PARP4Q9UKK3 1724 aaKnown RBP20.42■□□□□ 0.86
HNF4A-202ENST00000316673 THSD7AQ9UPZ6 1657 aa20.42■□□□□ 0.86
HNF4A-202ENST00000316673 SEPT12Q8IYM1 358 aa20.41■□□□□ 0.86
HNF4A-202ENST00000316673 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.41■□□□□ 0.86
HNF4A-202ENST00000316673 OVOS2A0A0G2JMS6 1433 aa20.4■□□□□ 0.86
HNF4A-202ENST00000316673 EXOC5O00471 708 aa20.4■□□□□ 0.86
HNF4A-202ENST00000316673 DDB1Q16531 1140 aa20.4■□□□□ 0.86
HNF4A-202ENST00000316673 NEFMP07197 916 aa20.39■□□□□ 0.85
HNF4A-202ENST00000316673 HMOX1P09601 288 aa20.39■□□□□ 0.85
HNF4A-202ENST00000316673 AMOTQ4VCS5 1084 aa20.38■□□□□ 0.85
HNF4A-202ENST00000316673 AEBP1Q8IUX7 1158 aa20.38■□□□□ 0.85
HNF4A-202ENST00000316673 SPG7Q9UQ90 795 aa20.38■□□□□ 0.85
HNF4A-202ENST00000316673 MEGF6O75095 1541 aa20.38■□□□□ 0.85
HNF4A-202ENST00000316673 ZBED9Q6R2W3 1325 aa20.38■□□□□ 0.85
HNF4A-202ENST00000316673 PDE3BQ13370 1112 aa20.37■□□□□ 0.85
HNF4A-202ENST00000316673 ZCRB1Q8TBF4 217 aaKnown RBP20.37■□□□□ 0.85
HNF4A-202ENST00000316673 RGS12O14924 1447 aa20.37■□□□□ 0.85
HNF4A-202ENST00000316673 TNS2Q63HR2 1409 aa20.37■□□□□ 0.85
HNF4A-202ENST00000316673 PLEKHO1Q53GL0 409 aaPredicted RBP20.37■□□□□ 0.85
HNF4A-202ENST00000316673 RSPH6AQ9H0K4 717 aa20.37■□□□□ 0.85
HNF4A-202ENST00000316673 LRRC37A3O60309 1634 aa20.35■□□□□ 0.85
HNF4A-202ENST00000316673 PRKAR2BP31323 418 aa20.35■□□□□ 0.85
HNF4A-202ENST00000316673 NGEFQ8N5V2 710 aa20.35■□□□□ 0.85
HNF4A-202ENST00000316673 PCDH11XQ9BZA7 1347 aa20.35■□□□□ 0.85
HNF4A-202ENST00000316673 PCDH11YQ9BZA8 1340 aa20.35■□□□□ 0.85
HNF4A-202ENST00000316673 PKD1L3Q7Z443 1732 aa20.34■□□□□ 0.85
HNF4A-202ENST00000316673 KRT27Q7Z3Y8 459 aa20.33■□□□□ 0.85
HNF4A-202ENST00000316673 ADAMTS8Q9UP79 889 aa20.33■□□□□ 0.85
HNF4A-202ENST00000316673 GAS2L2Q8NHY3 880 aa20.31■□□□□ 0.84
HNF4A-202ENST00000316673 MAPK8IP3Q9UPT6 1336 aa20.31■□□□□ 0.84
HNF4A-202ENST00000316673 IFNL2Q8IZJ0 200 aa20.3■□□□□ 0.84
HNF4A-202ENST00000316673 BRWD3Q6RI45 1802 aa20.29■□□□□ 0.84
HNF4A-202ENST00000316673 HSP90AB1P08238 724 aaKnown RBP20.29■□□□□ 0.84
HNF4A-202ENST00000316673 C1orf141Q5JVX7 400 aa20.29■□□□□ 0.84
HNF4A-202ENST00000316673 DDX54Q8TDD1 881 aaKnown RBP20.29■□□□□ 0.84
HNF4A-202ENST00000316673 RUNDC1Q96C34 613 aa20.29■□□□□ 0.84
HNF4A-202ENST00000316673 PLEKHF1Q96S99 279 aa20.29■□□□□ 0.84
HNF4A-202ENST00000316673 ZNF530Q6P9A1 599 aaPredicted RBP20.28■□□□□ 0.84
HNF4A-202ENST00000316673 BCL9O00512 1426 aa20.27■□□□□ 0.84
HNF4A-202ENST00000316673 FAM196AQ6ZSG2 479 aa20.27■□□□□ 0.84
HNF4A-202ENST00000316673 MARCH10Q8NA82 808 aaPredicted RBP20.27■□□□□ 0.84
HNF4A-202ENST00000316673 MTHFSDQ2M296 383 aaKnown RBP20.26■□□□□ 0.83
HNF4A-202ENST00000316673 AKAP4Q5JQC9 854 aa20.26■□□□□ 0.83
HNF4A-202ENST00000316673 PHACTR3Q96KR7 559 aa20.26■□□□□ 0.83
HNF4A-202ENST00000316673 SHANK3Q9BYB0 1731 aa20.26■□□□□ 0.83
HNF4A-202ENST00000316673 CYP27B1O15528 508 aa20.25■□□□□ 0.83
HNF4A-202ENST00000316673 PHKG2P15735 406 aa20.25■□□□□ 0.83
HNF4A-202ENST00000316673 NKX1-1Q15270 411 aaPredicted RBP20.24■□□□□ 0.83
HNF4A-202ENST00000316673 DCAF5Q96JK2 942 aa20.23■□□□□ 0.83
HNF4A-202ENST00000316673 GNAT3A8MTJ3 354 aa20.22■□□□□ 0.83
HNF4A-202ENST00000316673 HTATSF1O43719 755 aaKnown RBP20.22■□□□□ 0.83
HNF4A-202ENST00000316673 NFE2L2Q16236 605 aa20.22■□□□□ 0.83
HNF4A-202ENST00000316673 CCDC146Q8IYE0 955 aa20.22■□□□□ 0.83
HNF4A-202ENST00000316673 MAP3K5Q99683 1374 aa20.21■□□□□ 0.83
HNF4A-202ENST00000316673 NCBP3Q53F19 620 aaKnown RBP20.21■□□□□ 0.83
HNF4A-202ENST00000316673 LMOD3Q0VAK6 560 aa20.2■□□□□ 0.82
HNF4A-202ENST00000316673 RTF1Q92541 710 aaKnown RBP20.2■□□□□ 0.82
HNF4A-202ENST00000316673 TMPOP42166 694 aaKnown RBP20.18■□□□□ 0.82
HNF4A-202ENST00000316673 ERVV-2B6SEH9 535 aa20.18■□□□□ 0.82
HNF4A-202ENST00000316673 FAM182BQ5T319 152 aa20.18■□□□□ 0.82
HNF4A-202ENST00000316673 RIPK4P57078 832 aa20.17■□□□□ 0.82
HNF4A-202ENST00000316673 KAT6BQ8WYB5 2073 aa20.16■□□□□ 0.82
HNF4A-202ENST00000316673 APAF1O14727 1248 aa20.16■□□□□ 0.82
HNF4A-202ENST00000316673 MPRIPQ6WCQ1 1025 aa20.16■□□□□ 0.82
HNF4A-202ENST00000316673 CCDC125Q86Z20 511 aa20.15■□□□□ 0.82
HNF4A-202ENST00000316673 RNMTO43148 476 aaKnown RBP20.14■□□□□ 0.81
HNF4A-202ENST00000316673 BCL11BQ9C0K0 894 aaPredicted RBP20.14■□□□□ 0.81
HNF4A-202ENST00000316673 KDM6AO15550 1401 aaPredicted RBP20.14■□□□□ 0.81
HNF4A-202ENST00000316673 SCN11AQ9UI33 1791 aa20.14■□□□□ 0.81
HNF4A-202ENST00000316673 ADAMTS7Q9UKP4 1686 aa20.13■□□□□ 0.81
HNF4A-202ENST00000316673 SBF2Q86WG5 1849 aa20.13■□□□□ 0.81
HNF4A-202ENST00000316673 DLG5Q8TDM6 1919 aa20.13■□□□□ 0.81
HNF4A-202ENST00000316673 CEMIPQ8WUJ3 1361 aa20.13■□□□□ 0.81
HNF4A-202ENST00000316673 DOT1LQ8TEK3 1739 aa20.13■□□□□ 0.81
HNF4A-202ENST00000316673 CABP4P57796 275 aa20.12■□□□□ 0.81
HNF4A-202ENST00000316673 TMOD3Q9NYL9 352 aa20.12■□□□□ 0.81
HNF4A-202ENST00000316673 NHSQ6T4R5 1651 aa20.12■□□□□ 0.81
HNF4A-202ENST00000316673 PRIM1P49642 420 aaKnown RBP20.11■□□□□ 0.81
HNF4A-202ENST00000316673 TEFQ10587 303 aa20.11■□□□□ 0.81
HNF4A-202ENST00000316673 NEUROD2Q15784 382 aa20.11■□□□□ 0.81
HNF4A-202ENST00000316673 SYTL4Q96C24 671 aaPredicted RBP20.11■□□□□ 0.81
HNF4A-202ENST00000316673 ACSBG1Q96GR2 724 aa20.11■□□□□ 0.81
HNF4A-202ENST00000316673 SF3B2Q13435 895 aaKnown RBP20.11■□□□□ 0.81
HNF4A-202ENST00000316673 CCDC27Q2M243 656 aa20.11■□□□□ 0.81
HNF4A-202ENST00000316673 IL17REQ8NFR9 667 aa20.11■□□□□ 0.81
HNF4A-202ENST00000316673 SLC52A2Q9HAB3 445 aa20.11■□□□□ 0.81
HNF4A-202ENST00000316673 LGR6Q9HBX8 967 aa20.11■□□□□ 0.81
HNF4A-202ENST00000316673 RRP7AQ9Y3A4 280 aaKnown RBP20.11■□□□□ 0.81
HNF4A-202ENST00000316673 SALL2Q9Y467 1007 aaPredicted RBP20.11■□□□□ 0.81
HNF4A-202ENST00000316673 MRC1P22897 1456 aa20.1■□□□□ 0.81
HNF4A-202ENST00000316673 TRIM37O94972 964 aa20.1■□□□□ 0.81
HNF4A-202ENST00000316673 CALD1Q05682 793 aaKnown RBP20.1■□□□□ 0.81
HNF4A-202ENST00000316673 TOGARAM1Q9Y4F4 1720 aa20.09■□□□□ 0.81
HNF4A-202ENST00000316673 VIRMAQ69YN4 1812 aaKnown RBP20.09■□□□□ 0.81
HNF4A-202ENST00000316673 GOLGA2Q08379 1002 aa20.09■□□□□ 0.81
HNF4A-202ENST00000316673 MCM10Q7L590 875 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 305.9 ms