RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 OTUD7AQ8TE49 926 aaPredicted RBP18.39■□□□□ 0.53
TFE3-201ENST00000315869 CPSF1Q10570 1443 aaKnown RBP18.38■□□□□ 0.53
TFE3-201ENST00000315869 CIZ1Q9ULV3 898 aaPredicted RBP18.38■□□□□ 0.53
TFE3-201ENST00000315869 DLC1Q96QB1 1528 aa18.38■□□□□ 0.53
TFE3-201ENST00000315869 VIRMAQ69YN4 1812 aaKnown RBP18.38■□□□□ 0.53
TFE3-201ENST00000315869 EDC4Q6P2E9 1401 aaKnown RBP18.38■□□□□ 0.53
TFE3-201ENST00000315869 LMOD3Q0VAK6 560 aa18.38■□□□□ 0.53
TFE3-201ENST00000315869 RAB3GAP1Q15042 981 aa18.38■□□□□ 0.53
TFE3-201ENST00000315869 SKOR2Q2VWA4 1001 aaPredicted RBP18.38■□□□□ 0.53
TFE3-201ENST00000315869 IFT57Q9NWB7 429 aa18.37■□□□□ 0.53
TFE3-201ENST00000315869 MIS18AQ9NYP9 233 aa18.37■□□□□ 0.53
TFE3-201ENST00000315869 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.37■□□□□ 0.53
TFE3-201ENST00000315869 IL13P35225 146 aa18.37■□□□□ 0.53
TFE3-201ENST00000315869 CASC1Q6TDU7 716 aa18.37■□□□□ 0.53
TFE3-201ENST00000315869 MCM10Q7L590 875 aa18.37■□□□□ 0.53
TFE3-201ENST00000315869 FAM135BQ49AJ0 1406 aa18.37■□□□□ 0.53
TFE3-201ENST00000315869 ZNF428Q96B54 188 aa18.37■□□□□ 0.53
TFE3-201ENST00000315869 DNAJC5Q9H3Z4 198 aa18.36■□□□□ 0.53
TFE3-201ENST00000315869 RIMS1Q86UR5 1692 aaKnown RBP18.36■□□□□ 0.53
TFE3-201ENST00000315869 FOXD4L6Q3SYB3 417 aaPredicted RBP18.36■□□□□ 0.53
TFE3-201ENST00000315869 ESCO1Q5FWF5 840 aa18.36■□□□□ 0.53
TFE3-201ENST00000315869 CAVIN1Q6NZI2 390 aaKnown RBP18.36■□□□□ 0.53
TFE3-201ENST00000315869 FOXD4L3Q6VB84 417 aaPredicted RBP18.36■□□□□ 0.53
TFE3-201ENST00000315869 KIF2CQ99661 725 aa18.36■□□□□ 0.53
TFE3-201ENST00000315869 HSPA2P54652 639 aa18.35■□□□□ 0.53
TFE3-201ENST00000315869 EIF4A2Q14240 407 aaKnown RBP18.35■□□□□ 0.53
TFE3-201ENST00000315869 CFAP44Q96MT7 982 aa18.35■□□□□ 0.53
TFE3-201ENST00000315869 NASPP49321 788 aaPredicted RBP18.35■□□□□ 0.53
TFE3-201ENST00000315869 ABTB2Q8N961 1025 aa18.35■□□□□ 0.53
TFE3-201ENST00000315869 NECTIN2Q92692 538 aa18.35■□□□□ 0.53
TFE3-201ENST00000315869 GSPT1P15170 499 aaKnown RBP18.34■□□□□ 0.53
TFE3-201ENST00000315869 CLCN1P35523 988 aa18.34■□□□□ 0.53
TFE3-201ENST00000315869 AMPHP49418 695 aa18.34■□□□□ 0.53
TFE3-201ENST00000315869 PLEKHM2Q8IWE5 1019 aa18.34■□□□□ 0.53
TFE3-201ENST00000315869 COL3A1P02461 1466 aaPredicted RBP18.34■□□□□ 0.53
TFE3-201ENST00000315869 ARHGAP45Q92619 1136 aa18.33■□□□□ 0.53
TFE3-201ENST00000315869 TECPR2O15040 1411 aa18.33■□□□□ 0.52
TFE3-201ENST00000315869 FOXO3O43524 673 aa18.33■□□□□ 0.52
TFE3-201ENST00000315869 BAG4O95429 457 aaKnown RBP18.33■□□□□ 0.52
TFE3-201ENST00000315869 USP32Q8NFA0 1604 aa18.33■□□□□ 0.52
TFE3-201ENST00000315869 MAP2P11137 1827 aaKnown RBP18.32■□□□□ 0.52
TFE3-201ENST00000315869 INTS3Q68E01 1043 aaKnown RBP18.32■□□□□ 0.52
TFE3-201ENST00000315869 USHBP1Q8N6Y0 703 aa18.32■□□□□ 0.52
TFE3-201ENST00000315869 SIRT1Q96EB6 747 aa18.32■□□□□ 0.52
TFE3-201ENST00000315869 RABEP1Q15276 862 aa18.32■□□□□ 0.52
TFE3-201ENST00000315869 TSHZ3Q63HK5 1081 aa18.32■□□□□ 0.52
TFE3-201ENST00000315869 MAP3K19Q56UN5 1328 aa18.31■□□□□ 0.52
TFE3-201ENST00000315869 PLEKHG3A1L390 1219 aa18.31■□□□□ 0.52
TFE3-201ENST00000315869 SLC4A2P04920 1241 aa18.31■□□□□ 0.52
TFE3-201ENST00000315869 ORAI2Q96SN7 254 aa18.31■□□□□ 0.52
TFE3-201ENST00000315869 F6X3S4 739 aa18.3■□□□□ 0.52
TFE3-201ENST00000315869 ST18O60284 1047 aa18.3■□□□□ 0.52
TFE3-201ENST00000315869 PRPF40AO75400 957 aaKnown RBP18.3■□□□□ 0.52
TFE3-201ENST00000315869 MEIS3Q99687 375 aa18.3■□□□□ 0.52
TFE3-201ENST00000315869 DDX17Q92841 729 aaKnown RBP18.3■□□□□ 0.52
TFE3-201ENST00000315869 CHAMP1Q96JM3 812 aa18.3■□□□□ 0.52
TFE3-201ENST00000315869 PTMSP20962 102 aa18.3■□□□□ 0.52
TFE3-201ENST00000315869 PKP1Q13835 747 aa18.3■□□□□ 0.52
TFE3-201ENST00000315869 TTC22Q5TAA0 569 aa18.3■□□□□ 0.52
TFE3-201ENST00000315869 PNPLA6Q8IY17 1366 aa18.3■□□□□ 0.52
TFE3-201ENST00000315869 SDSP20132 328 aa18.29■□□□□ 0.52
TFE3-201ENST00000315869 ERBB4Q15303 1308 aa18.29■□□□□ 0.52
TFE3-201ENST00000315869 MSNP26038 577 aaKnown RBP18.29■□□□□ 0.52
TFE3-201ENST00000315869 USP6P35125 1406 aa18.29■□□□□ 0.52
TFE3-201ENST00000315869 HSP90AA2PQ14568 343 aaPredicted RBP18.29■□□□□ 0.52
TFE3-201ENST00000315869 ZGPATQ8N5A5 531 aaKnown RBP18.29■□□□□ 0.52
TFE3-201ENST00000315869 ABCC4O15439 1325 aa18.28■□□□□ 0.52
TFE3-201ENST00000315869 TRIM6-TRIM34B2RNG4 842 aa18.28■□□□□ 0.52
TFE3-201ENST00000315869 DCTPP1Q9H773 170 aa18.28■□□□□ 0.52
TFE3-201ENST00000315869 LRRC7Q96NW7 1537 aa18.28■□□□□ 0.52
TFE3-201ENST00000315869 RTF1Q92541 710 aaKnown RBP18.27■□□□□ 0.52
TFE3-201ENST00000315869 RILPL2Q969X0 211 aa18.27■□□□□ 0.52
TFE3-201ENST00000315869 ADGRB2O60241 1585 aa18.27■□□□□ 0.52
TFE3-201ENST00000315869 CDC42BPGQ6DT37 1551 aa18.27■□□□□ 0.52
TFE3-201ENST00000315869 MED14O60244 1454 aa18.27■□□□□ 0.52
TFE3-201ENST00000315869 NUCB2P80303 420 aa18.27■□□□□ 0.52
TFE3-201ENST00000315869 PSME1Q06323 249 aa18.27■□□□□ 0.52
TFE3-201ENST00000315869 ISY1Q9ULR0 285 aaKnown RBP18.27■□□□□ 0.52
TFE3-201ENST00000315869 EXOC6BQ9Y2D4 811 aa18.27■□□□□ 0.52
TFE3-201ENST00000315869 KIF20BQ96Q89 1820 aa18.27■□□□□ 0.52
TFE3-201ENST00000315869 DDIT3P35638 169 aa18.27■□□□□ 0.51
TFE3-201ENST00000315869 ARHGAP23Q9P227 1491 aa18.26■□□□□ 0.51
TFE3-201ENST00000315869 NEK4P51957 841 aa18.26■□□□□ 0.51
TFE3-201ENST00000315869 RBM27Q9P2N5 1060 aaKnown RBP18.26■□□□□ 0.51
TFE3-201ENST00000315869 PHF8Q9UPP1 1060 aa18.26■□□□□ 0.51
TFE3-201ENST00000315869 PROSER2Q86WR7 435 aaPredicted RBP18.26■□□□□ 0.51
TFE3-201ENST00000315869 RGPD8O14715 1765 aaPredicted RBP18.25■□□□□ 0.51
TFE3-201ENST00000315869 USP26Q9BXU7 913 aa18.25■□□□□ 0.51
TFE3-201ENST00000315869 CEP170BQ9Y4F5 1589 aaPredicted RBP18.25■□□□□ 0.51
TFE3-201ENST00000315869 HMMRO75330 724 aa18.25■□□□□ 0.51
TFE3-201ENST00000315869 REC8O95072 547 aa18.25■□□□□ 0.51
TFE3-201ENST00000315869 ANKRD44Q8N8A2 993 aa18.24■□□□□ 0.51
TFE3-201ENST00000315869 RNF214Q8ND24 703 aa18.24■□□□□ 0.51
TFE3-201ENST00000315869 TSPYL4Q9UJ04 414 aa18.24■□□□□ 0.51
TFE3-201ENST00000315869 SLIT1O75093 1534 aa18.24■□□□□ 0.51
TFE3-201ENST00000315869 ZNF853P0CG23 659 aa18.24■□□□□ 0.51
TFE3-201ENST00000315869 HAP1P54257 671 aaPredicted RBP18.24■□□□□ 0.51
TFE3-201ENST00000315869 CEP85Q6P2H3 762 aa18.24■□□□□ 0.51
TFE3-201ENST00000315869 SETD1BQ9UPS6 1966 aaKnown RBP18.24■□□□□ 0.51
TFE3-201ENST00000315869 BRPF1P55201 1214 aaPredicted RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms