RNA–Protein interactions for RNA: ENST00000314754.12

CD55-201, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD55, Length 2,220 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-201ENST00000314754 SMC5Q8IY18 1101 aa24.15■■□□□ 1.46
CD55-201ENST00000314754 API5Q9BZZ5 524 aaKnown RBP24.14■■□□□ 1.46
CD55-201ENST00000314754 RTF1Q92541 710 aaKnown RBP24.14■■□□□ 1.45
CD55-201ENST00000314754 ZBTB7BO15156 539 aaPredicted RBP24.13■■□□□ 1.45
CD55-201ENST00000314754 ESCO1Q5FWF5 840 aa24.12■■□□□ 1.45
CD55-201ENST00000314754 PSME1Q06323 249 aa24.11■■□□□ 1.45
CD55-201ENST00000314754 NFAT5O94916 1531 aa24.1■■□□□ 1.45
CD55-201ENST00000314754 HTATSF1O43719 755 aaKnown RBP24.1■■□□□ 1.45
CD55-201ENST00000314754 LTV1Q96GA3 475 aaPredicted RBP24.1■■□□□ 1.45
CD55-201ENST00000314754 MIS18AQ9NYP9 233 aa24.09■■□□□ 1.45
CD55-201ENST00000314754 LRRC37A3O60309 1634 aa24.07■■□□□ 1.44
CD55-201ENST00000314754 SEC24BO95487 1268 aa24.07■■□□□ 1.44
CD55-201ENST00000314754 RGPD2P0DJD1 1756 aa24.07■■□□□ 1.44
CD55-201ENST00000314754 IP6K1Q92551 441 aa24.06■■□□□ 1.44
CD55-201ENST00000314754 ORAI2Q96SN7 254 aa24.06■■□□□ 1.44
CD55-201ENST00000314754 KCNH5Q8NCM2 988 aa24.06■■□□□ 1.44
CD55-201ENST00000314754 C1orf115Q9H7X2 142 aa24.06■■□□□ 1.44
CD55-201ENST00000314754 TSPYL4Q9UJ04 414 aa24.05■■□□□ 1.44
CD55-201ENST00000314754 PHRF1Q9P1Y6 1649 aaKnown RBP24.05■■□□□ 1.44
CD55-201ENST00000314754 XPCQ01831 940 aaPredicted RBP24.04■■□□□ 1.44
CD55-201ENST00000314754 DNAJC5Q9H3Z4 198 aa24.04■■□□□ 1.44
CD55-201ENST00000314754 GNAT3A8MTJ3 354 aa24.04■■□□□ 1.44
CD55-201ENST00000314754 USHBP1Q8N6Y0 703 aa24.04■■□□□ 1.44
CD55-201ENST00000314754 NUCB1Q02818 461 aa24.03■■□□□ 1.44
CD55-201ENST00000314754 USP19O94966 1318 aa24.03■■□□□ 1.44
CD55-201ENST00000314754 PTPRCP08575 1304 aa24.03■■□□□ 1.44
CD55-201ENST00000314754 INTS3Q68E01 1043 aaKnown RBP24.03■■□□□ 1.44
CD55-201ENST00000314754 RGS12O14924 1447 aa24.03■■□□□ 1.44
CD55-201ENST00000314754 MAP3K5Q99683 1374 aa24.02■■□□□ 1.44
CD55-201ENST00000314754 PROSER2Q86WR7 435 aaPredicted RBP24.01■■□□□ 1.43
CD55-201ENST00000314754 GCC1Q96CN9 775 aa24■■□□□ 1.43
CD55-201ENST00000314754 TRPM3Q9HCF6 1732 aaPredicted RBP24■■□□□ 1.43
CD55-201ENST00000314754 PLEKHG5O94827 1062 aa23.99■■□□□ 1.43
CD55-201ENST00000314754 MSH6P52701 1360 aa23.99■■□□□ 1.43
CD55-201ENST00000314754 ZBTB7CA1YPR0 619 aa23.99■■□□□ 1.43
CD55-201ENST00000314754 STRCP1A6NGW2 1772 aa23.98■■□□□ 1.43
CD55-201ENST00000314754 SLIT3O75094 1523 aa23.98■■□□□ 1.43
CD55-201ENST00000314754 SLC4A3P48751 1232 aa23.98■■□□□ 1.43
CD55-201ENST00000314754 CHD1LQ86WJ1 897 aa23.98■■□□□ 1.43
CD55-201ENST00000314754 KIF1AQ12756 1690 aa23.97■■□□□ 1.43
CD55-201ENST00000314754 SIRT2Q8IXJ6 389 aa23.97■■□□□ 1.43
CD55-201ENST00000314754 C19orf44Q9H6X5 657 aa23.97■■□□□ 1.43
CD55-201ENST00000314754 UPF2Q9HAU5 1272 aaKnown RBP23.97■■□□□ 1.43
CD55-201ENST00000314754 BABAM1Q9NWV8 329 aa23.97■■□□□ 1.43
CD55-201ENST00000314754 DAXXQ9UER7 740 aaPredicted RBP23.97■■□□□ 1.43
CD55-201ENST00000314754 SLC4A2P04920 1241 aa23.96■■□□□ 1.43
CD55-201ENST00000314754 NBR1Q14596 966 aa23.96■■□□□ 1.43
CD55-201ENST00000314754 C1orf167Q5SNV9 1468 aa23.95■■□□□ 1.43
CD55-201ENST00000314754 NBPF6Q5VWK0 638 aa23.95■■□□□ 1.42
CD55-201ENST00000314754 IL17REQ8NFR9 667 aa23.95■■□□□ 1.42
CD55-201ENST00000314754 NBPF4Q96M43 638 aa23.95■■□□□ 1.42
CD55-201ENST00000314754 GCP02774 474 aa23.95■■□□□ 1.42
CD55-201ENST00000314754 LNPKQ9C0E8 428 aa23.95■■□□□ 1.42
CD55-201ENST00000314754 FAM208AQ9UK61 1670 aaKnown RBP23.94■■□□□ 1.42
CD55-201ENST00000314754 SOS1Q07889 1333 aaPredicted RBP23.94■■□□□ 1.42
CD55-201ENST00000314754 ARHGEF25Q86VW2 580 aa23.93■■□□□ 1.42
CD55-201ENST00000314754 TAF7Q15545 349 aaPredicted RBP23.92■■□□□ 1.42
CD55-201ENST00000314754 LMOD2Q6P5Q4 547 aa23.92■■□□□ 1.42
CD55-201ENST00000314754 RGPD5Q99666 1765 aa23.91■■□□□ 1.42
CD55-201ENST00000314754 G2E3Q7L622 706 aa23.91■■□□□ 1.42
CD55-201ENST00000314754 LRRC59Q96AG4 307 aaKnown RBP23.91■■□□□ 1.42
CD55-201ENST00000314754 TBC1D32Q96NH3 1257 aa23.91■■□□□ 1.42
CD55-201ENST00000314754 MST1RQ04912 1400 aa23.91■■□□□ 1.42
CD55-201ENST00000314754 ANKRD45Q5TZF3 282 aa23.91■■□□□ 1.42
CD55-201ENST00000314754 KRT28Q7Z3Y7 464 aa23.91■■□□□ 1.42
CD55-201ENST00000314754 STK31Q9BXU1 1019 aa23.91■■□□□ 1.42
CD55-201ENST00000314754 CEMIPQ8WUJ3 1361 aa23.91■■□□□ 1.42
CD55-201ENST00000314754 CACNA1FO60840 1977 aa23.9■■□□□ 1.42
CD55-201ENST00000314754 ATP10DQ9P241 1426 aa23.89■■□□□ 1.42
CD55-201ENST00000314754 CCDC30Q5VVM6 783 aa23.89■■□□□ 1.41
CD55-201ENST00000314754 NCAPD2Q15021 1401 aa23.89■■□□□ 1.41
CD55-201ENST00000314754 DCCP43146 1447 aa23.88■■□□□ 1.41
CD55-201ENST00000314754 ALS2Q96Q42 1657 aa23.88■■□□□ 1.41
CD55-201ENST00000314754 RPAP2Q8IXW5 612 aaPredicted RBP23.87■■□□□ 1.41
CD55-201ENST00000314754 ANKRD44Q8N8A2 993 aa23.87■■□□□ 1.41
CD55-201ENST00000314754 MED1Q15648 1581 aaPredicted RBP23.87■■□□□ 1.41
CD55-201ENST00000314754 NCOA3Q9Y6Q9 1424 aa23.87■■□□□ 1.41
CD55-201ENST00000314754 CCT4P50991 539 aaKnown RBP23.86■■□□□ 1.41
CD55-201ENST00000314754 LMO7Q8WWI1 1683 aa23.86■■□□□ 1.41
CD55-201ENST00000314754 TMEM94Q12767 1356 aa23.86■■□□□ 1.41
CD55-201ENST00000314754 BMP2KLQ5H9B9 411 aa23.86■■□□□ 1.41
CD55-201ENST00000314754 DCTPP1Q9H773 170 aa23.86■■□□□ 1.41
CD55-201ENST00000314754 F6X3S4 739 aa23.85■■□□□ 1.41
CD55-201ENST00000314754 ATF3P18847 181 aa23.85■■□□□ 1.41
CD55-201ENST00000314754 NECTIN2Q92692 538 aa23.85■■□□□ 1.41
CD55-201ENST00000314754 MEIS3Q99687 375 aa23.84■■□□□ 1.41
CD55-201ENST00000314754 CEP85Q6P2H3 762 aa23.84■■□□□ 1.41
CD55-201ENST00000314754 DDX17Q92841 729 aaKnown RBP23.84■■□□□ 1.41
CD55-201ENST00000314754 CAMTA1Q9Y6Y1 1673 aa23.83■■□□□ 1.41
CD55-201ENST00000314754 AMOTQ4VCS5 1084 aa23.83■■□□□ 1.41
CD55-201ENST00000314754 PLEKHO1Q53GL0 409 aaPredicted RBP23.83■■□□□ 1.41
CD55-201ENST00000314754 AXIN2Q9Y2T1 843 aa23.83■■□□□ 1.41
CD55-201ENST00000314754 FLIIQ13045 1269 aa23.83■■□□□ 1.4
CD55-201ENST00000314754 ANKRD24Q8TF21 1146 aa23.83■■□□□ 1.4
CD55-201ENST00000314754 LGR6Q9HBX8 967 aa23.83■■□□□ 1.4
CD55-201ENST00000314754 KDM3BQ7LBC6 1761 aa23.82■■□□□ 1.4
CD55-201ENST00000314754 BECN1Q14457 450 aa23.82■■□□□ 1.4
CD55-201ENST00000314754 RTL5Q5HYW3 569 aaPredicted RBP23.82■■□□□ 1.4
CD55-201ENST00000314754 AKAP4Q5JQC9 854 aa23.82■■□□□ 1.4
CD55-201ENST00000314754 PXDNQ92626 1479 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms