RNA–Protein interactions for RNA: ENST00000310931.8

HDLBP-201, Transcript of high density lipoprotein binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDLBP, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-201ENST00000310931 U2SURPO15042 1029 aaKnown RBP11.63□□□□□ -0.55
HDLBP-201ENST00000310931 HMGN5P82970 282 aaKnown RBP11.63□□□□□ -0.55
HDLBP-201ENST00000310931 CHMP4BQ9H444 224 aaKnown RBP11.63□□□□□ -0.55
HDLBP-201ENST00000310931 FLT4P35916 1363 aa11.63□□□□□ -0.55
HDLBP-201ENST00000310931 FCHSD2O94868 740 aa11.63□□□□□ -0.55
HDLBP-201ENST00000310931 U2AF1L5P0DN76 240 aaPredicted RBP11.63□□□□□ -0.55
HDLBP-201ENST00000310931 U2AF1Q01081 240 aaKnown RBP eCLIP11.63□□□□□ -0.553e-6■□□□□ 11.1
HDLBP-201ENST00000310931 TAF7LQ5H9L4 462 aa11.63□□□□□ -0.55
HDLBP-201ENST00000310931 CGNQ9P2M7 1197 aaKnown RBP11.63□□□□□ -0.55
HDLBP-201ENST00000310931 CFAP44Q96MT7 982 aa11.62□□□□□ -0.55
HDLBP-201ENST00000310931 PNPLA6Q8IY17 1366 aa11.62□□□□□ -0.55
HDLBP-201ENST00000310931 IQSEC2Q5JU85 1478 aa11.62□□□□□ -0.55
HDLBP-201ENST00000310931 FOXD4L5Q5VV16 416 aaPredicted RBP11.62□□□□□ -0.55
HDLBP-201ENST00000310931 FOXD4L4Q8WXT5 416 aaPredicted RBP11.62□□□□□ -0.55
HDLBP-201ENST00000310931 RWDD1Q9H446 243 aaPredicted RBP11.62□□□□□ -0.55
HDLBP-201ENST00000310931 NAP1L2Q9ULW6 460 aaPredicted RBP11.62□□□□□ -0.55
HDLBP-201ENST00000310931 E9PSI1 815 aa11.61□□□□□ -0.55
HDLBP-201ENST00000310931 CHMP4AQ9BY43 222 aa11.61□□□□□ -0.55
HDLBP-201ENST00000310931 BCL11BQ9C0K0 894 aaPredicted RBP11.61□□□□□ -0.55
HDLBP-201ENST00000310931 ZNF335Q9H4Z2 1342 aaPredicted RBP11.61□□□□□ -0.55
HDLBP-201ENST00000310931 UQCRHLA0A096LP55 91 aa11.6□□□□□ -0.55
HDLBP-201ENST00000310931 H0YHG0 523 aa11.6□□□□□ -0.55
HDLBP-201ENST00000310931 UQCRHP07919 91 aa11.6□□□□□ -0.55
HDLBP-201ENST00000310931 RDXP35241 583 aaKnown RBP11.6□□□□□ -0.55
HDLBP-201ENST00000310931 HSP90AB3PQ58FF7 597 aa11.6□□□□□ -0.55
HDLBP-201ENST00000310931 PLCD3Q8N3E9 789 aa11.6□□□□□ -0.55
HDLBP-201ENST00000310931 SLAIN2Q9P270 581 aa11.6□□□□□ -0.55
HDLBP-201ENST00000310931 EXOC6Q8TAG9 804 aa11.6□□□□□ -0.55
HDLBP-201ENST00000310931 DEF6Q9H4E7 631 aa11.6□□□□□ -0.55
HDLBP-201ENST00000310931 POLKQ9UBT6 870 aa11.6□□□□□ -0.55
HDLBP-201ENST00000310931 ADAMTS8Q9UP79 889 aa11.6□□□□□ -0.55
HDLBP-201ENST00000310931 TOM1O60784 492 aa11.6□□□□□ -0.55
HDLBP-201ENST00000310931 ABCC6O95255 1503 aa11.59□□□□□ -0.55
HDLBP-201ENST00000310931 TNS3Q68CZ2 1445 aa11.59□□□□□ -0.55
HDLBP-201ENST00000310931 TRAK2O60296 914 aa11.59□□□□□ -0.55
HDLBP-201ENST00000310931 HAP1P54257 671 aaPredicted RBP11.59□□□□□ -0.55
HDLBP-201ENST00000310931 ARGLU1Q9NWB6 273 aaPredicted RBP11.59□□□□□ -0.55
HDLBP-201ENST00000310931 TPM4P67936 248 aa11.59□□□□□ -0.55
HDLBP-201ENST00000310931 CCDC27Q2M243 656 aa11.59□□□□□ -0.55
HDLBP-201ENST00000310931 LMOD2Q6P5Q4 547 aa11.58□□□□□ -0.56
HDLBP-201ENST00000310931 PLEKHG2Q9H7P9 1386 aa11.58□□□□□ -0.56
HDLBP-201ENST00000310931 FOXO3O43524 673 aa11.58□□□□□ -0.56
HDLBP-201ENST00000310931 TULP1O00294 542 aaPredicted RBP11.57□□□□□ -0.56
HDLBP-201ENST00000310931 GOLGA2Q08379 1002 aa11.57□□□□□ -0.56
HDLBP-201ENST00000310931 CENPQQ7L2Z9 268 aaPredicted RBP11.57□□□□□ -0.56
HDLBP-201ENST00000310931 WDR63Q8IWG1 891 aa11.57□□□□□ -0.56
HDLBP-201ENST00000310931 CCDC39Q9UFE4 941 aa11.57□□□□□ -0.56
HDLBP-201ENST00000310931 USP19O94966 1318 aa11.56□□□□□ -0.56
HDLBP-201ENST00000310931 ERICH4A6NGS2 130 aa11.56□□□□□ -0.56
HDLBP-201ENST00000310931 ORAI2Q96SN7 254 aa11.56□□□□□ -0.56
HDLBP-201ENST00000310931 IFT57Q9NWB7 429 aa11.56□□□□□ -0.56
HDLBP-201ENST00000310931 CBX1P83916 185 aa11.56□□□□□ -0.56
HDLBP-201ENST00000310931 FOXD4L6Q3SYB3 417 aaPredicted RBP11.56□□□□□ -0.56
HDLBP-201ENST00000310931 FOXD4L3Q6VB84 417 aaPredicted RBP11.56□□□□□ -0.56
HDLBP-201ENST00000310931 PAXIP1Q6ZW49 1069 aaPredicted RBP11.56□□□□□ -0.56
HDLBP-201ENST00000310931 TPM3P06753 285 aa11.55□□□□□ -0.56
HDLBP-201ENST00000310931 HSP90B2PQ58FF3 399 aa11.55□□□□□ -0.56
HDLBP-201ENST00000310931 IP6K1Q92551 441 aa11.55□□□□□ -0.56
HDLBP-201ENST00000310931 COL3A1P02461 1466 aaPredicted RBP11.55□□□□□ -0.56
HDLBP-201ENST00000310931 STRCP1A6NGW2 1772 aa11.55□□□□□ -0.56
HDLBP-201ENST00000310931 SLIT3O75094 1523 aa11.55□□□□□ -0.56
HDLBP-201ENST00000310931 IL16Q14005 1332 aa11.55□□□□□ -0.56
HDLBP-201ENST00000310931 IRX3P78415 501 aaPredicted RBP11.55□□□□□ -0.56
HDLBP-201ENST00000310931 HOMER1Q86YM7 354 aa11.55□□□□□ -0.56
HDLBP-201ENST00000310931 RGPD8O14715 1765 aaPredicted RBP11.54□□□□□ -0.56
HDLBP-201ENST00000310931 GOLGA6L19H0YKK7 550 aa11.54□□□□□ -0.56
HDLBP-201ENST00000310931 GAS2L2Q8NHY3 880 aa11.54□□□□□ -0.56
HDLBP-201ENST00000310931 LRRC59Q96AG4 307 aaKnown RBP11.54□□□□□ -0.56
HDLBP-201ENST00000310931 TRERF1Q96PN7 1200 aa11.54□□□□□ -0.56
HDLBP-201ENST00000310931 PIK3C2AO00443 1686 aa11.54□□□□□ -0.56
HDLBP-201ENST00000310931 SPATA31A3Q5VYP0 1347 aa11.54□□□□□ -0.56
HDLBP-201ENST00000310931 CT47B1P0C2W7 299 aaPredicted RBP11.54□□□□□ -0.56
HDLBP-201ENST00000310931 CCDC173Q0VFZ6 552 aa11.54□□□□□ -0.56
HDLBP-201ENST00000310931 NOL8Q76FK4 1167 aaKnown RBP11.54□□□□□ -0.56
HDLBP-201ENST00000310931 RNF214Q8ND24 703 aa11.54□□□□□ -0.56
HDLBP-201ENST00000310931 BRINP3Q76B58 766 aa11.54□□□□□ -0.56
HDLBP-201ENST00000310931 MED1Q15648 1581 aaPredicted RBP11.54□□□□□ -0.56
HDLBP-201ENST00000310931 APBB1O00213 710 aa11.53□□□□□ -0.56
HDLBP-201ENST00000310931 IL13P35225 146 aa11.53□□□□□ -0.56
HDLBP-201ENST00000310931 EMILIN1Q9Y6C2 1016 aa11.53□□□□□ -0.56
HDLBP-201ENST00000310931 KIF16BQ96L93 1317 aa11.53□□□□□ -0.56
HDLBP-201ENST00000310931 BECN2A8MW95 431 aa11.53□□□□□ -0.56
HDLBP-201ENST00000310931 MNS1Q8NEH6 495 aa11.53□□□□□ -0.56
HDLBP-201ENST00000310931 RBM33Q96EV2 1170 aaKnown RBP11.53□□□□□ -0.56
HDLBP-201ENST00000310931 TSPYL1Q9H0U9 437 aa11.53□□□□□ -0.56
HDLBP-201ENST00000310931 MAP3K19Q56UN5 1328 aa11.53□□□□□ -0.56
HDLBP-201ENST00000310931 ST18O60284 1047 aa11.53□□□□□ -0.56
HDLBP-201ENST00000310931 RBM25P49756 843 aaKnown RBP11.53□□□□□ -0.56
HDLBP-201ENST00000310931 RRP1P56182 461 aaKnown RBP11.53□□□□□ -0.56
HDLBP-201ENST00000310931 SOS2Q07890 1332 aaPredicted RBP11.53□□□□□ -0.56
HDLBP-201ENST00000310931 LEKR1Q6ZMV7 388 aa11.52□□□□□ -0.56
HDLBP-201ENST00000310931 GPATCH11Q8N954 259 aa11.52□□□□□ -0.56
HDLBP-201ENST00000310931 PLIN1O60240 522 aa11.52□□□□□ -0.57
HDLBP-201ENST00000310931 GCP02774 474 aa11.52□□□□□ -0.57
HDLBP-201ENST00000310931 RRS1Q15050 365 aaKnown RBP11.52□□□□□ -0.57
HDLBP-201ENST00000310931 APAF1O14727 1248 aa11.52□□□□□ -0.57
HDLBP-201ENST00000310931 HOXC9P31274 260 aa11.52□□□□□ -0.57
HDLBP-201ENST00000310931 SKAP1Q86WV1 359 aa11.52□□□□□ -0.57
HDLBP-201ENST00000310931 TCP11L2Q8N4U5 519 aa11.52□□□□□ -0.57
HDLBP-201ENST00000310931 MAP2P11137 1827 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms