RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 RRP1P56182 461 aaKnown RBP29.22■■■□□ 2.27
IRF3-201ENST00000309877 RAPGEF4Q8WZA2 1011 aa29.22■■■□□ 2.27
IRF3-201ENST00000309877 FAM208AQ9UK61 1670 aaKnown RBP29.22■■■□□ 2.27
IRF3-201ENST00000309877 WDR17Q8IZU2 1322 aa29.22■■■□□ 2.27
IRF3-201ENST00000309877 EVA1CP58658 441 aa29.21■■■□□ 2.27
IRF3-201ENST00000309877 MAP3K5Q99683 1374 aa29.21■■■□□ 2.27
IRF3-201ENST00000309877 CFAP44Q96MT7 982 aa29.21■■■□□ 2.27
IRF3-201ENST00000309877 COL5A2P05997 1499 aaPredicted RBP29.19■■■□□ 2.26
IRF3-201ENST00000309877 ZNF853P0CG23 659 aa29.19■■■□□ 2.26
IRF3-201ENST00000309877 EXOSC9Q06265 439 aaKnown RBP29.19■■■□□ 2.26
IRF3-201ENST00000309877 TOM1L2Q6ZVM7 507 aa29.19■■■□□ 2.26
IRF3-201ENST00000309877 TATP17735 454 aaPredicted RBP29.18■■■□□ 2.26
IRF3-201ENST00000309877 ZNF530Q6P9A1 599 aaPredicted RBP29.18■■■□□ 2.26
IRF3-201ENST00000309877 STRN4Q9NRL3 753 aa29.18■■■□□ 2.26
IRF3-201ENST00000309877 CT47B1P0C2W7 299 aaPredicted RBP29.17■■■□□ 2.26
IRF3-201ENST00000309877 AKAP4Q5JQC9 854 aa29.15■■■□□ 2.26
IRF3-201ENST00000309877 MBIPQ9NS73 344 aa29.15■■■□□ 2.26
IRF3-201ENST00000309877 BTG4Q9NY30 223 aa29.15■■■□□ 2.26
IRF3-201ENST00000309877 C1orf141Q5JVX7 400 aa29.15■■■□□ 2.26
IRF3-201ENST00000309877 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.13■■■□□ 2.25
IRF3-201ENST00000309877 CRB1P82279 1406 aa29.13■■■□□ 2.25
IRF3-201ENST00000309877 NUTM2BA6NNL0 878 aaPredicted RBP29.12■■■□□ 2.25
IRF3-201ENST00000309877 NUTM2EB1AL46 878 aaPredicted RBP29.12■■■□□ 2.25
IRF3-201ENST00000309877 NUTM2AQ8IVF1 878 aaPredicted RBP29.12■■■□□ 2.25
IRF3-201ENST00000309877 CARD10Q9BWT7 1032 aa29.12■■■□□ 2.25
IRF3-201ENST00000309877 COL14A1Q05707 1796 aaKnown RBP29.12■■■□□ 2.25
IRF3-201ENST00000309877 ADAMTS2O95450 1211 aa29.12■■■□□ 2.25
IRF3-201ENST00000309877 ERICH6BQ5W0A0 696 aa29.12■■■□□ 2.25
IRF3-201ENST00000309877 LARP1Q6PKG0 1096 aaKnown RBP29.12■■■□□ 2.25
IRF3-201ENST00000309877 IL17REQ8NFR9 667 aa29.12■■■□□ 2.25
IRF3-201ENST00000309877 SPG7Q9UQ90 795 aa29.12■■■□□ 2.25
IRF3-201ENST00000309877 PLEKHG2Q9H7P9 1386 aa29.11■■■□□ 2.25
IRF3-201ENST00000309877 CHL1O00533 1208 aa29.11■■■□□ 2.25
IRF3-201ENST00000309877 RARSP54136 660 aaKnown RBP29.11■■■□□ 2.25
IRF3-201ENST00000309877 PLIN1O60240 522 aa29.1■■■□□ 2.25
IRF3-201ENST00000309877 BCAR3O75815 825 aa29.1■■■□□ 2.25
IRF3-201ENST00000309877 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.1■■■□□ 2.25
IRF3-201ENST00000309877 MEGF6O75095 1541 aa29.09■■■□□ 2.25
IRF3-201ENST00000309877 JCADQ9P266 1359 aa29.08■■■□□ 2.25
IRF3-201ENST00000309877 TSPYL4Q9UJ04 414 aa29.05■■■□□ 2.24
IRF3-201ENST00000309877 MPRIPQ6WCQ1 1025 aa29.05■■■□□ 2.24
IRF3-201ENST00000309877 TAF7Q15545 349 aaPredicted RBP29.04■■■□□ 2.24
IRF3-201ENST00000309877 LGR6Q9HBX8 967 aa29.04■■■□□ 2.24
IRF3-201ENST00000309877 MIS18AQ9NYP9 233 aa29.04■■■□□ 2.24
IRF3-201ENST00000309877 CEMIPQ8WUJ3 1361 aa29.04■■■□□ 2.24
IRF3-201ENST00000309877 LRRC37A3O60309 1634 aa29.03■■■□□ 2.24
IRF3-201ENST00000309877 RNMTO43148 476 aaKnown RBP29.02■■■□□ 2.24
IRF3-201ENST00000309877 IL2RBP14784 551 aa29.02■■■□□ 2.24
IRF3-201ENST00000309877 ZNF428Q96B54 188 aa29.02■■■□□ 2.24
IRF3-201ENST00000309877 OVOS2A0A0G2JMS6 1433 aa29.02■■■□□ 2.24
IRF3-201ENST00000309877 CANXP27824 592 aaKnown RBP29.02■■■□□ 2.24
IRF3-201ENST00000309877 IFNL2Q8IZJ0 200 aa29.02■■■□□ 2.24
IRF3-201ENST00000309877 BABAM1Q9NWV8 329 aa29.02■■■□□ 2.24
IRF3-201ENST00000309877 ELL2O00472 640 aaPredicted RBP29.01■■■□□ 2.23
IRF3-201ENST00000309877 TEFQ10587 303 aa29.01■■■□□ 2.23
IRF3-201ENST00000309877 TWISTNBQ3B726 338 aaPredicted RBP29.01■■■□□ 2.23
IRF3-201ENST00000309877 C8orf58Q8NAV2 365 aa29.01■■■□□ 2.23
IRF3-201ENST00000309877 BCL2L13Q9BXK5 485 aa29.01■■■□□ 2.23
IRF3-201ENST00000309877 USP35Q9P2H5 1018 aa29.01■■■□□ 2.23
IRF3-201ENST00000309877 PHKG2P15735 406 aa29■■■□□ 2.23
IRF3-201ENST00000309877 TSPYL6Q8N831 410 aa29■■■□□ 2.23
IRF3-201ENST00000309877 SMC4Q9NTJ3 1288 aa29■■■□□ 2.23
IRF3-201ENST00000309877 VAMP4O75379 141 aa28.99■■■□□ 2.23
IRF3-201ENST00000309877 ZCRB1Q8TBF4 217 aaKnown RBP28.99■■■□□ 2.23
IRF3-201ENST00000309877 FRAT1Q92837 279 aaPredicted RBP28.99■■■□□ 2.23
IRF3-201ENST00000309877 ALDH1L2Q3SY69 923 aa28.98■■■□□ 2.23
IRF3-201ENST00000309877 SSH1Q8WYL5 1049 aa28.98■■■□□ 2.23
IRF3-201ENST00000309877 PARP4Q9UKK3 1724 aaKnown RBP28.98■■■□□ 2.23
IRF3-201ENST00000309877 HSP90AB1P08238 724 aaKnown RBP28.96■■■□□ 2.23
IRF3-201ENST00000309877 PKD1L3Q7Z443 1732 aa28.96■■■□□ 2.23
IRF3-201ENST00000309877 HSPA1LP34931 641 aa28.96■■■□□ 2.23
IRF3-201ENST00000309877 SPATA31A6Q5VVP1 1343 aa28.95■■■□□ 2.23
IRF3-201ENST00000309877 CYP27B1O15528 508 aa28.95■■■□□ 2.22
IRF3-201ENST00000309877 C20orf194Q5TEA3 1177 aa28.95■■■□□ 2.22
IRF3-201ENST00000309877 PPP4R2Q9NY27 417 aa28.95■■■□□ 2.22
IRF3-201ENST00000309877 PLCH1Q4KWH8 1693 aa28.95■■■□□ 2.22
IRF3-201ENST00000309877 PCDH11XQ9BZA7 1347 aa28.95■■■□□ 2.22
IRF3-201ENST00000309877 PCDH11YQ9BZA8 1340 aa28.95■■■□□ 2.22
IRF3-201ENST00000309877 KRT24Q2M2I5 525 aa28.93■■■□□ 2.22
IRF3-201ENST00000309877 EXOC6Q8TAG9 804 aa28.93■■■□□ 2.22
IRF3-201ENST00000309877 DCAF5Q96JK2 942 aa28.93■■■□□ 2.22
IRF3-201ENST00000309877 BTBD11A6QL63 1104 aa28.91■■■□□ 2.22
IRF3-201ENST00000309877 CRBNQ96SW2 442 aa28.91■■■□□ 2.22
IRF3-201ENST00000309877 PDE3AQ14432 1141 aa28.9■■■□□ 2.22
IRF3-201ENST00000309877 ZKSCAN2Q63HK3 967 aa28.89■■■□□ 2.22
IRF3-201ENST00000309877 NGLY1Q96IV0 654 aa28.89■■■□□ 2.22
IRF3-201ENST00000309877 C8orf37Q96NL8 207 aa28.89■■■□□ 2.22
IRF3-201ENST00000309877 SLIT2O94813 1529 aa28.89■■■□□ 2.22
IRF3-201ENST00000309877 KIF16BQ96L93 1317 aa28.89■■■□□ 2.22
IRF3-201ENST00000309877 KDM6AO15550 1401 aaPredicted RBP28.88■■■□□ 2.21
IRF3-201ENST00000309877 DDX54Q8TDD1 881 aaKnown RBP28.88■■■□□ 2.21
IRF3-201ENST00000309877 ADAMTS7Q9UKP4 1686 aa28.87■■■□□ 2.21
IRF3-201ENST00000309877 BRPF1P55201 1214 aaPredicted RBP28.87■■■□□ 2.21
IRF3-201ENST00000309877 SLC52A2Q9HAB3 445 aa28.87■■■□□ 2.21
IRF3-201ENST00000309877 NRAPQ86VF7 1730 aa28.87■■■□□ 2.21
IRF3-201ENST00000309877 IPO8O15397 1037 aaKnown RBP28.86■■■□□ 2.21
IRF3-201ENST00000309877 MRPL50Q8N5N7 158 aaKnown RBP28.86■■■□□ 2.21
IRF3-201ENST00000309877 NOB1Q9ULX3 412 aaKnown RBP28.86■■■□□ 2.21
IRF3-201ENST00000309877 NWD2Q9ULI1 1742 aa28.86■■■□□ 2.21
IRF3-201ENST00000309877 MS4A1P11836 297 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms