RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 PDE3BQ13370 1112 aa12.21□□□□□ -0.46
PDE4D-201ENST00000309641 CDCA7Q9BWT1 371 aaPredicted RBP12.21□□□□□ -0.46
PDE4D-201ENST00000309641 KDRP35968 1356 aa12.21□□□□□ -0.46
PDE4D-201ENST00000309641 TATP17735 454 aaPredicted RBP12.2□□□□□ -0.46
PDE4D-201ENST00000309641 TNS2Q63HR2 1409 aa12.2□□□□□ -0.46
PDE4D-201ENST00000309641 DDX54Q8TDD1 881 aaKnown RBP12.2□□□□□ -0.46
PDE4D-201ENST00000309641 ZCRB1Q8TBF4 217 aaKnown RBP12.2□□□□□ -0.46
PDE4D-201ENST00000309641 SHANK3Q9BYB0 1731 aa12.19□□□□□ -0.46
PDE4D-201ENST00000309641 U2AF1L5P0DN76 240 aaPredicted RBP12.19□□□□□ -0.46
PDE4D-201ENST00000309641 U2AF1Q01081 240 aaKnown RBP eCLIP12.19□□□□□ -0.46
PDE4D-201ENST00000309641 DIEXFQ68CQ4 756 aaKnown RBP12.18□□□□□ -0.46
PDE4D-201ENST00000309641 CYP27B1O15528 508 aa12.18□□□□□ -0.46
PDE4D-201ENST00000309641 PTF1AQ7RTS3 328 aa12.18□□□□□ -0.46
PDE4D-201ENST00000309641 RSPH6AQ9H0K4 717 aa12.18□□□□□ -0.46
PDE4D-201ENST00000309641 NUDCQ9Y266 331 aa12.18□□□□□ -0.46
PDE4D-201ENST00000309641 PRKAR2BP31323 418 aa12.16□□□□□ -0.46
PDE4D-201ENST00000309641 PHACTR3Q96KR7 559 aa12.16□□□□□ -0.46
PDE4D-201ENST00000309641 PKD1L3Q7Z443 1732 aa12.16□□□□□ -0.46
PDE4D-201ENST00000309641 KCNQ2O43526 872 aa12.15□□□□□ -0.47
PDE4D-201ENST00000309641 TRIM37O94972 964 aa12.15□□□□□ -0.47
PDE4D-201ENST00000309641 MTHFSDQ2M296 383 aaKnown RBP12.15□□□□□ -0.47
PDE4D-201ENST00000309641 ACSBG1Q96GR2 724 aa12.15□□□□□ -0.47
PDE4D-201ENST00000309641 SPG7Q9UQ90 795 aa12.15□□□□□ -0.47
PDE4D-201ENST00000309641 FAM196AQ6ZSG2 479 aa12.14□□□□□ -0.47
PDE4D-201ENST00000309641 UPF1Q92900 1129 aaKnown RBP eCLIP12.14□□□□□ -0.47
PDE4D-201ENST00000309641 MRS2Q9HD23 443 aa12.14□□□□□ -0.47
PDE4D-201ENST00000309641 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.14□□□□□ -0.47
PDE4D-201ENST00000309641 ADAMTS8Q9UP79 889 aa12.14□□□□□ -0.47
PDE4D-201ENST00000309641 PCDH11XQ9BZA7 1347 aa12.14□□□□□ -0.47
PDE4D-201ENST00000309641 PCDH11YQ9BZA8 1340 aa12.14□□□□□ -0.47
PDE4D-201ENST00000309641 FCHSD2O94868 740 aa12.13□□□□□ -0.47
PDE4D-201ENST00000309641 PHKG2P15735 406 aa12.13□□□□□ -0.47
PDE4D-201ENST00000309641 PLEKHO1Q53GL0 409 aaPredicted RBP12.13□□□□□ -0.47
PDE4D-201ENST00000309641 ZNF530Q6P9A1 599 aaPredicted RBP12.13□□□□□ -0.47
PDE4D-201ENST00000309641 KAT6BQ8WYB5 2073 aa12.13□□□□□ -0.47
PDE4D-201ENST00000309641 MIER1Q8N108 512 aa12.13□□□□□ -0.47
PDE4D-201ENST00000309641 PLEKHF1Q96S99 279 aa12.13□□□□□ -0.47
PDE4D-201ENST00000309641 CCDC146Q8IYE0 955 aa12.12□□□□□ -0.47
PDE4D-201ENST00000309641 SBF2Q86WG5 1849 aa12.12□□□□□ -0.47
PDE4D-201ENST00000309641 AMOTQ4VCS5 1084 aa12.11□□□□□ -0.47
PDE4D-201ENST00000309641 SOCS7O14512 581 aa12.11□□□□□ -0.47
PDE4D-201ENST00000309641 PRIM1P49642 420 aaKnown RBP12.11□□□□□ -0.47
PDE4D-201ENST00000309641 WDR43Q15061 677 aaKnown RBP eCLIP12.11□□□□□ -0.47
PDE4D-201ENST00000309641 MPRIPQ6WCQ1 1025 aa12.11□□□□□ -0.47
PDE4D-201ENST00000309641 IFNL2Q8IZJ0 200 aa12.11□□□□□ -0.47
PDE4D-201ENST00000309641 PNISRQ8TF01 805 aaKnown RBP12.11□□□□□ -0.47
PDE4D-201ENST00000309641 BCL9O00512 1426 aa12.11□□□□□ -0.47
PDE4D-201ENST00000309641 TOGARAM1Q9Y4F4 1720 aa12.1□□□□□ -0.47
PDE4D-201ENST00000309641 SENP3-EIF4A1A0A087X0R7 540 aa12.1□□□□□ -0.47
PDE4D-201ENST00000309641 NKX1-1Q15270 411 aaPredicted RBP12.1□□□□□ -0.47
PDE4D-201ENST00000309641 SYTL4Q96C24 671 aaPredicted RBP12.1□□□□□ -0.47
PDE4D-201ENST00000309641 KDM6AO15550 1401 aaPredicted RBP12.1□□□□□ -0.47
PDE4D-201ENST00000309641 DEFB132Q7Z7B7 95 aa12.1□□□□□ -0.47
PDE4D-201ENST00000309641 DOT1LQ8TEK3 1739 aa12.1□□□□□ -0.47
PDE4D-201ENST00000309641 LGR6Q9HBX8 967 aa12.1□□□□□ -0.47
PDE4D-201ENST00000309641 PLEKHG2Q9H7P9 1386 aa12.09□□□□□ -0.47
PDE4D-201ENST00000309641 C1orf141Q5JVX7 400 aa12.08□□□□□ -0.48
PDE4D-201ENST00000309641 TNS1Q9HBL0 1735 aaKnown RBP12.08□□□□□ -0.48
PDE4D-201ENST00000309641 AKAP4Q5JQC9 854 aa12.08□□□□□ -0.48
PDE4D-201ENST00000309641 BCL11BQ9C0K0 894 aaPredicted RBP12.08□□□□□ -0.48
PDE4D-201ENST00000309641 APBA3O96018 575 aa12.07□□□□□ -0.48
PDE4D-201ENST00000309641 DCTN1Q14203 1278 aa12.07□□□□□ -0.48
PDE4D-201ENST00000309641 GAS2L2Q8NHY3 880 aa12.07□□□□□ -0.48
PDE4D-201ENST00000309641 RRP7AQ9Y3A4 280 aaKnown RBP12.07□□□□□ -0.48
PDE4D-201ENST00000309641 NHSQ6T4R5 1651 aa12.07□□□□□ -0.48
PDE4D-201ENST00000309641 EN1Q05925 392 aaPredicted RBP12.06□□□□□ -0.48
PDE4D-201ENST00000309641 FAM9BQ8IZU0 186 aa12.06□□□□□ -0.48
PDE4D-201ENST00000309641 IL17REQ8NFR9 667 aa12.06□□□□□ -0.48
PDE4D-201ENST00000309641 DCAF5Q96JK2 942 aa12.06□□□□□ -0.48
PDE4D-201ENST00000309641 PIGBQ92521 554 aa12.06□□□□□ -0.48
PDE4D-201ENST00000309641 ITGB4P16144 1822 aa12.06□□□□□ -0.48
PDE4D-201ENST00000309641 MAP3K5Q99683 1374 aa12.06□□□□□ -0.48
PDE4D-201ENST00000309641 BTAF1O14981 1849 aa12.05□□□□□ -0.48
PDE4D-201ENST00000309641 GNAT3A8MTJ3 354 aa12.05□□□□□ -0.48
PDE4D-201ENST00000309641 RNMTO43148 476 aaKnown RBP12.05□□□□□ -0.48
PDE4D-201ENST00000309641 MCM10Q7L590 875 aa12.05□□□□□ -0.48
PDE4D-201ENST00000309641 RUNDC1Q96C34 613 aa12.05□□□□□ -0.48
PDE4D-201ENST00000309641 MAPK8IP3Q9UPT6 1336 aa12.05□□□□□ -0.48
PDE4D-201ENST00000309641 NEUROD2Q15784 382 aa12.04□□□□□ -0.48
PDE4D-201ENST00000309641 NFE2L2Q16236 605 aa12.04□□□□□ -0.48
PDE4D-201ENST00000309641 NFATC2IPQ8NCF5 419 aa12.04□□□□□ -0.48
PDE4D-201ENST00000309641 THUMPD2Q9BTF0 503 aaKnown RBP12.04□□□□□ -0.48
PDE4D-201ENST00000309641 SCN11AQ9UI33 1791 aa12.04□□□□□ -0.48
PDE4D-201ENST00000309641 DLG5Q8TDM6 1919 aa12.04□□□□□ -0.48
PDE4D-201ENST00000309641 VIRMAQ69YN4 1812 aaKnown RBP12.04□□□□□ -0.48
PDE4D-201ENST00000309641 APAF1O14727 1248 aa12.04□□□□□ -0.48
PDE4D-201ENST00000309641 HSP90AB1P08238 724 aaKnown RBP12.04□□□□□ -0.48
PDE4D-201ENST00000309641 TMPOP42166 694 aaKnown RBP12.04□□□□□ -0.48
PDE4D-201ENST00000309641 SF3B2Q13435 895 aaKnown RBP12.04□□□□□ -0.48
PDE4D-201ENST00000309641 EZH2Q15910 746 aaKnown RBP12.04□□□□□ -0.48
PDE4D-201ENST00000309641 CCDC125Q86Z20 511 aa12.04□□□□□ -0.48
PDE4D-201ENST00000309641 CCER2I3L3R5 266 aa12.03□□□□□ -0.48
PDE4D-201ENST00000309641 KCNQ4P56696 695 aa12.03□□□□□ -0.48
PDE4D-201ENST00000309641 PROM2Q8N271 834 aa12.03□□□□□ -0.48
PDE4D-201ENST00000309641 TMOD3Q9NYL9 352 aa12.03□□□□□ -0.48
PDE4D-201ENST00000309641 ASAP1Q9ULH1 1129 aa12.03□□□□□ -0.48
PDE4D-201ENST00000309641 ADAMTS7Q9UKP4 1686 aa12.03□□□□□ -0.48
PDE4D-201ENST00000309641 ERVV-2B6SEH9 535 aa12.03□□□□□ -0.48
PDE4D-201ENST00000309641 NEFMP07197 916 aa12.03□□□□□ -0.48
PDE4D-201ENST00000309641 RIPK4P57078 832 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms