RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 HTATSF1O43719 755 aaKnown RBP28.61■■■□□ 2.17
SMAD1-201ENST00000302085 LRRC59Q96AG4 307 aaKnown RBP28.61■■■□□ 2.17
SMAD1-201ENST00000302085 SLAIN2Q9P270 581 aa28.61■■■□□ 2.17
SMAD1-201ENST00000302085 BRPF1P55201 1214 aaPredicted RBP28.6■■■□□ 2.17
SMAD1-201ENST00000302085 DZIP1LQ8IYY4 767 aaKnown RBP28.6■■■□□ 2.17
SMAD1-201ENST00000302085 ZC3H6P61129 1189 aaKnown RBP28.59■■■□□ 2.17
SMAD1-201ENST00000302085 TWISTNBQ3B726 338 aaPredicted RBP28.59■■■□□ 2.17
SMAD1-201ENST00000302085 SPATA31A3Q5VYP0 1347 aa28.59■■■□□ 2.17
SMAD1-201ENST00000302085 TNS3Q68CZ2 1445 aa28.59■■■□□ 2.17
SMAD1-201ENST00000302085 TRIM27P14373 513 aa28.59■■■□□ 2.17
SMAD1-201ENST00000302085 ATF7IPQ6VMQ6 1270 aa28.58■■■□□ 2.17
SMAD1-201ENST00000302085 ANKRD24Q8TF21 1146 aa28.58■■■□□ 2.17
SMAD1-201ENST00000302085 RGPD2P0DJD1 1756 aa28.57■■■□□ 2.16
SMAD1-201ENST00000302085 GNAT3A8MTJ3 354 aa28.57■■■□□ 2.16
SMAD1-201ENST00000302085 MS4A1P11836 297 aa28.57■■■□□ 2.16
SMAD1-201ENST00000302085 MRPL50Q8N5N7 158 aaKnown RBP28.57■■■□□ 2.16
SMAD1-201ENST00000302085 KIF16BQ96L93 1317 aa28.56■■■□□ 2.16
SMAD1-201ENST00000302085 CABLES1Q8TDN4 633 aa28.55■■■□□ 2.16
SMAD1-201ENST00000302085 IPO8O15397 1037 aaKnown RBP28.55■■■□□ 2.16
SMAD1-201ENST00000302085 MVPQ14764 893 aaKnown RBP28.55■■■□□ 2.16
SMAD1-201ENST00000302085 CENPQQ7L2Z9 268 aaPredicted RBP28.55■■■□□ 2.16
SMAD1-201ENST00000302085 FTSJ3Q8IY81 847 aaKnown RBP28.54■■■□□ 2.16
SMAD1-201ENST00000302085 AAMPQ13685 434 aa28.53■■■□□ 2.16
SMAD1-201ENST00000302085 MIS18AQ9NYP9 233 aa28.53■■■□□ 2.16
SMAD1-201ENST00000302085 MAP3K5Q99683 1374 aa28.53■■■□□ 2.16
SMAD1-201ENST00000302085 NCAPD2Q15021 1401 aa28.53■■■□□ 2.16
SMAD1-201ENST00000302085 KRT24Q2M2I5 525 aa28.52■■■□□ 2.16
SMAD1-201ENST00000302085 IL17REQ8NFR9 667 aa28.52■■■□□ 2.16
SMAD1-201ENST00000302085 RBM19Q9Y4C8 960 aaKnown RBP28.52■■■□□ 2.16
SMAD1-201ENST00000302085 KIAA0232Q92628 1395 aa28.51■■■□□ 2.15
SMAD1-201ENST00000302085 TCERG1O14776 1098 aaKnown RBP28.51■■■□□ 2.15
SMAD1-201ENST00000302085 RGPD5Q99666 1765 aa28.5■■■□□ 2.15
SMAD1-201ENST00000302085 IGHDP01880 384 aa28.49■■■□□ 2.15
SMAD1-201ENST00000302085 SOS2Q07890 1332 aaPredicted RBP28.49■■■□□ 2.15
SMAD1-201ENST00000302085 TSPYL4Q9UJ04 414 aa28.48■■■□□ 2.15
SMAD1-201ENST00000302085 LRRC37A3O60309 1634 aa28.48■■■□□ 2.15
SMAD1-201ENST00000302085 ARHGAP45Q92619 1136 aa28.48■■■□□ 2.15
SMAD1-201ENST00000302085 ERBB3P21860 1342 aa28.47■■■□□ 2.15
SMAD1-201ENST00000302085 TMEM57Q8N5G2 664 aa28.46■■■□□ 2.15
SMAD1-201ENST00000302085 PCDHB15Q9Y5E8 787 aa28.46■■■□□ 2.15
SMAD1-201ENST00000302085 COL18A1P39060 1754 aa28.46■■■□□ 2.15
SMAD1-201ENST00000302085 CRYBG1Q9Y4K1 1723 aa28.46■■■□□ 2.15
SMAD1-201ENST00000302085 CAMTA1Q9Y6Y1 1673 aa28.46■■■□□ 2.15
SMAD1-201ENST00000302085 SKAP1Q86WV1 359 aa28.46■■■□□ 2.15
SMAD1-201ENST00000302085 PLEKHO1Q53GL0 409 aaPredicted RBP28.45■■■□□ 2.14
SMAD1-201ENST00000302085 ITPRIPQ8IWB1 547 aa28.44■■■□□ 2.14
SMAD1-201ENST00000302085 DDX19BQ9UMR2 479 aa28.43■■■□□ 2.14
SMAD1-201ENST00000302085 HAP1P54257 671 aaPredicted RBP28.42■■■□□ 2.14
SMAD1-201ENST00000302085 TAF7Q15545 349 aaPredicted RBP28.42■■■□□ 2.14
SMAD1-201ENST00000302085 CHRNA2Q15822 529 aa28.42■■■□□ 2.14
SMAD1-201ENST00000302085 AMOTQ4VCS5 1084 aa28.42■■■□□ 2.14
SMAD1-201ENST00000302085 ZNF530Q6P9A1 599 aaPredicted RBP28.41■■■□□ 2.14
SMAD1-201ENST00000302085 CPDO75976 1380 aa28.41■■■□□ 2.14
SMAD1-201ENST00000302085 CEMIPQ8WUJ3 1361 aa28.41■■■□□ 2.14
SMAD1-201ENST00000302085 LGR6Q9HBX8 967 aa28.41■■■□□ 2.14
SMAD1-201ENST00000302085 BABAM1Q9NWV8 329 aa28.41■■■□□ 2.14
SMAD1-201ENST00000302085 LMO7Q8WWI1 1683 aa28.4■■■□□ 2.14
SMAD1-201ENST00000302085 AKAP4Q5JQC9 854 aa28.4■■■□□ 2.14
SMAD1-201ENST00000302085 NLRP2Q9NX02 1062 aa28.39■■■□□ 2.13
SMAD1-201ENST00000302085 ABCC6O95255 1503 aa28.37■■■□□ 2.13
SMAD1-201ENST00000302085 API5Q9BZZ5 524 aaKnown RBP28.36■■■□□ 2.13
SMAD1-201ENST00000302085 ABCC4O15439 1325 aa28.36■■■□□ 2.13
SMAD1-201ENST00000302085 ZBTB40Q9NUA8 1239 aa28.35■■■□□ 2.13
SMAD1-201ENST00000302085 CSB-PGBD3P0DP91 1061 aa28.33■■■□□ 2.13
SMAD1-201ENST00000302085 MPRIPQ6WCQ1 1025 aa28.33■■■□□ 2.13
SMAD1-201ENST00000302085 RWDD1Q9H446 243 aaPredicted RBP28.33■■■□□ 2.13
SMAD1-201ENST00000302085 C1orf141Q5JVX7 400 aa28.32■■■□□ 2.12
SMAD1-201ENST00000302085 RNMTO43148 476 aaKnown RBP28.31■■■□□ 2.12
SMAD1-201ENST00000302085 NHSL1Q5SYE7 1610 aa28.31■■■□□ 2.12
SMAD1-201ENST00000302085 FAM208AQ9UK61 1670 aaKnown RBP28.31■■■□□ 2.12
SMAD1-201ENST00000302085 ZBTB7BO15156 539 aaPredicted RBP28.3■■■□□ 2.12
SMAD1-201ENST00000302085 SLC4A2P04920 1241 aa28.3■■■□□ 2.12
SMAD1-201ENST00000302085 RAPGEF4Q8WZA2 1011 aa28.3■■■□□ 2.12
SMAD1-201ENST00000302085 PRDM11Q9NQV5 511 aa28.28■■■□□ 2.12
SMAD1-201ENST00000302085 TATP17735 454 aaPredicted RBP28.28■■■□□ 2.12
SMAD1-201ENST00000302085 RGS12O14924 1447 aa28.27■■■□□ 2.12
SMAD1-201ENST00000302085 SOS1Q07889 1333 aaPredicted RBP28.27■■■□□ 2.12
SMAD1-201ENST00000302085 TEFQ10587 303 aa28.26■■■□□ 2.11
SMAD1-201ENST00000302085 PTPRCP08575 1304 aa28.26■■■□□ 2.11
SMAD1-201ENST00000302085 HDAC1Q13547 482 aaPredicted RBP28.26■■■□□ 2.11
SMAD1-201ENST00000302085 MEGF6O75095 1541 aa28.25■■■□□ 2.11
SMAD1-201ENST00000302085 OVOS2A0A0G2JMS6 1433 aa28.25■■■□□ 2.11
SMAD1-201ENST00000302085 G2E3Q7L622 706 aa28.24■■■□□ 2.11
SMAD1-201ENST00000302085 CHMP4BQ9H444 224 aaKnown RBP28.24■■■□□ 2.11
SMAD1-201ENST00000302085 KCNQ3O43525 872 aa28.24■■■□□ 2.11
SMAD1-201ENST00000302085 EIF4A1P60842 406 aaKnown RBP28.24■■■□□ 2.11
SMAD1-201ENST00000302085 CCDC30Q5VVM6 783 aa28.24■■■□□ 2.11
SMAD1-201ENST00000302085 INTS3Q68E01 1043 aaKnown RBP28.24■■■□□ 2.11
SMAD1-201ENST00000302085 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.24■■■□□ 2.11
SMAD1-201ENST00000302085 ABCA3Q99758 1704 aa28.23■■■□□ 2.11
SMAD1-201ENST00000302085 PDE4AP27815 886 aa28.23■■■□□ 2.11
SMAD1-201ENST00000302085 RGS3P49796 1198 aa28.23■■■□□ 2.11
SMAD1-201ENST00000302085 LTBP4Q8N2S1 1624 aa28.23■■■□□ 2.11
SMAD1-201ENST00000302085 BTBD11A6QL63 1104 aa28.22■■■□□ 2.11
SMAD1-201ENST00000302085 SPG7Q9UQ90 795 aa28.22■■■□□ 2.11
SMAD1-201ENST00000302085 KDM3BQ7LBC6 1761 aa28.22■■■□□ 2.11
SMAD1-201ENST00000302085 STK31Q9BXU1 1019 aa28.21■■■□□ 2.11
SMAD1-201ENST00000302085 VIRMAQ69YN4 1812 aaKnown RBP28.21■■■□□ 2.11
SMAD1-201ENST00000302085 NECTIN2Q92692 538 aa28.2■■■□□ 2.11
SMAD1-201ENST00000302085 WDR17Q8IZU2 1322 aa28.2■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms