RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 DTNBO60941 627 aa16.73■□□□□ 0.27
CTTN-201ENST00000301843 CPSF1Q10570 1443 aaKnown RBP16.73■□□□□ 0.27
CTTN-201ENST00000301843 CIZ1Q9ULV3 898 aaPredicted RBP16.72■□□□□ 0.27
CTTN-201ENST00000301843 PRPF40AO75400 957 aaKnown RBP16.72■□□□□ 0.27
CTTN-201ENST00000301843 API5Q9BZZ5 524 aaKnown RBP16.72■□□□□ 0.27
CTTN-201ENST00000301843 PLPPR3Q6T4P5 718 aa16.72■□□□□ 0.27
CTTN-201ENST00000301843 G2E3Q7L622 706 aa16.72■□□□□ 0.27
CTTN-201ENST00000301843 WASLO00401 505 aaPredicted RBP16.71■□□□□ 0.27
CTTN-201ENST00000301843 ARHGAP45Q92619 1136 aa16.71■□□□□ 0.27
CTTN-201ENST00000301843 NUDT16Q96DE0 195 aaKnown RBP16.71■□□□□ 0.27
CTTN-201ENST00000301843 USP26Q9BXU7 913 aa16.71■□□□□ 0.27
CTTN-201ENST00000301843 PTCH1Q13635 1447 aa16.71■□□□□ 0.27
CTTN-201ENST00000301843 METP08581 1390 aa16.71■□□□□ 0.27
CTTN-201ENST00000301843 MSH6P52701 1360 aa16.71■□□□□ 0.27
CTTN-201ENST00000301843 EDC4Q6P2E9 1401 aaKnown RBP16.71■□□□□ 0.27
CTTN-201ENST00000301843 GOLGA6L22H0YM25 854 aa16.71■□□□□ 0.27
CTTN-201ENST00000301843 DCTPP1Q9H773 170 aa16.71■□□□□ 0.27
CTTN-201ENST00000301843 EXOC6BQ9Y2D4 811 aa16.71■□□□□ 0.26
CTTN-201ENST00000301843 SLC4A2P04920 1241 aa16.7■□□□□ 0.26
CTTN-201ENST00000301843 CALD1Q05682 793 aaKnown RBP16.7■□□□□ 0.26
CTTN-201ENST00000301843 HSP90AB2PQ58FF8 381 aa16.7■□□□□ 0.26
CTTN-201ENST00000301843 CEP85Q6P2H3 762 aa16.7■□□□□ 0.26
CTTN-201ENST00000301843 MPNDQ8N594 471 aa16.7■□□□□ 0.26
CTTN-201ENST00000301843 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.7■□□□□ 0.26
CTTN-201ENST00000301843 NSFL1CQ9UNZ2 370 aaKnown RBP16.69■□□□□ 0.26
CTTN-201ENST00000301843 KNDC1Q76NI1 1749 aa16.69■□□□□ 0.26
CTTN-201ENST00000301843 BRPF1P55201 1214 aaPredicted RBP16.68■□□□□ 0.26
CTTN-201ENST00000301843 EIF4A2Q14240 407 aaKnown RBP16.68■□□□□ 0.26
CTTN-201ENST00000301843 SKOR2Q2VWA4 1001 aaPredicted RBP16.68■□□□□ 0.26
CTTN-201ENST00000301843 RNF214Q8ND24 703 aa16.67■□□□□ 0.26
CTTN-201ENST00000301843 ZNF428Q96B54 188 aa16.67■□□□□ 0.26
CTTN-201ENST00000301843 ANKRD44Q8N8A2 993 aa16.67■□□□□ 0.26
CTTN-201ENST00000301843 ARID3AQ99856 593 aa16.67■□□□□ 0.26
CTTN-201ENST00000301843 PIK3R4Q99570 1358 aa16.67■□□□□ 0.26
CTTN-201ENST00000301843 RABEP1Q15276 862 aa16.67■□□□□ 0.26
CTTN-201ENST00000301843 CDK12Q9NYV4 1490 aaPredicted RBP16.66■□□□□ 0.26
CTTN-201ENST00000301843 ZSCAN23Q3MJ62 389 aa16.66■□□□□ 0.26
CTTN-201ENST00000301843 INTS3Q68E01 1043 aaKnown RBP16.66■□□□□ 0.26
CTTN-201ENST00000301843 RBSNQ9H1K0 784 aa16.66■□□□□ 0.26
CTTN-201ENST00000301843 CHMP4BQ9H444 224 aaKnown RBP16.66■□□□□ 0.26
CTTN-201ENST00000301843 AATKQ6ZMQ8 1374 aa16.66■□□□□ 0.26
CTTN-201ENST00000301843 PRIM1P49642 420 aaKnown RBP16.66■□□□□ 0.26
CTTN-201ENST00000301843 HSP90AA2PQ14568 343 aaPredicted RBP16.66■□□□□ 0.26
CTTN-201ENST00000301843 CPS1P31327 1500 aa16.66■□□□□ 0.26
CTTN-201ENST00000301843 KLHL40Q2TBA0 621 aa16.65■□□□□ 0.26
CTTN-201ENST00000301843 SIRT1Q96EB6 747 aa16.65■□□□□ 0.26
CTTN-201ENST00000301843 LMBRD1Q9NUN5 540 aa16.65■□□□□ 0.26
CTTN-201ENST00000301843 TECPR2O15040 1411 aa16.65■□□□□ 0.26
CTTN-201ENST00000301843 NEK4P51957 841 aa16.65■□□□□ 0.26
CTTN-201ENST00000301843 ZDHHC9Q9Y397 364 aa16.65■□□□□ 0.26
CTTN-201ENST00000301843 MON2Q7Z3U7 1717 aa16.65■□□□□ 0.26
CTTN-201ENST00000301843 DLG5Q8TDM6 1919 aa16.65■□□□□ 0.26
CTTN-201ENST00000301843 GPT2Q8TD30 523 aa16.65■□□□□ 0.26
CTTN-201ENST00000301843 LARP6Q9BRS8 491 aaKnown RBP16.64■□□□□ 0.25
CTTN-201ENST00000301843 GDPD2Q9HCC8 539 aa16.64■□□□□ 0.25
CTTN-201ENST00000301843 RILPL2Q969X0 211 aa16.64■□□□□ 0.25
CTTN-201ENST00000301843 ATP10DQ9P241 1426 aa16.64■□□□□ 0.25
CTTN-201ENST00000301843 MAP4K4O95819 1239 aaPredicted RBP16.64■□□□□ 0.25
CTTN-201ENST00000301843 LMOD3Q0VAK6 560 aa16.64■□□□□ 0.25
CTTN-201ENST00000301843 ESF1Q9H501 851 aaKnown RBP16.64■□□□□ 0.25
CTTN-201ENST00000301843 CCDC61Q9Y6R9 512 aa16.64■□□□□ 0.25
CTTN-201ENST00000301843 PRR36Q9H6K5 1346 aa16.63■□□□□ 0.25
CTTN-201ENST00000301843 SYCE3A1L190 88 aa16.63■□□□□ 0.25
CTTN-201ENST00000301843 PLEKHG5O94827 1062 aa16.63■□□□□ 0.25
CTTN-201ENST00000301843 ANP32BQ92688 251 aaKnown RBP16.63■□□□□ 0.25
CTTN-201ENST00000301843 UPF3BQ9BZI7 483 aaKnown RBP16.63■□□□□ 0.25
CTTN-201ENST00000301843 RTL1A6NKG5 1358 aa16.63■□□□□ 0.25
CTTN-201ENST00000301843 RBM10P98175 930 aaKnown RBP16.63■□□□□ 0.25
CTTN-201ENST00000301843 VSIG10Q8N0Z9 540 aa16.63■□□□□ 0.25
CTTN-201ENST00000301843 PALD1Q9ULE6 856 aa16.63■□□□□ 0.25
CTTN-201ENST00000301843 TRIM6-TRIM34B2RNG4 842 aa16.62■□□□□ 0.25
CTTN-201ENST00000301843 HDGFP51858 240 aaKnown RBP16.62■□□□□ 0.25
CTTN-201ENST00000301843 KIAA1211Q6ZU35 1233 aa16.62■□□□□ 0.25
CTTN-201ENST00000301843 AKAP12Q02952 1782 aa16.62■□□□□ 0.25
CTTN-201ENST00000301843 C3P01024 1663 aa16.62■□□□□ 0.25
CTTN-201ENST00000301843 NUTM2GQ5VZR2 741 aa16.62■□□□□ 0.25
CTTN-201ENST00000301843 ST18O60284 1047 aa16.61■□□□□ 0.25
CTTN-201ENST00000301843 XPCQ01831 940 aaPredicted RBP16.61■□□□□ 0.25
CTTN-201ENST00000301843 TSPYL4Q9UJ04 414 aa16.61■□□□□ 0.25
CTTN-201ENST00000301843 TMEM63CQ9P1W3 806 aa16.6■□□□□ 0.25
CTTN-201ENST00000301843 ITSN1Q15811 1721 aa16.6■□□□□ 0.25
CTTN-201ENST00000301843 TNRQ92752 1358 aa16.6■□□□□ 0.25
CTTN-201ENST00000301843 RGS12O14924 1447 aa16.6■□□□□ 0.25
CTTN-201ENST00000301843 CCDC173Q0VFZ6 552 aa16.6■□□□□ 0.25
CTTN-201ENST00000301843 CASC1Q6TDU7 716 aa16.6■□□□□ 0.25
CTTN-201ENST00000301843 ANO2Q9NQ90 1003 aa16.6■□□□□ 0.25
CTTN-201ENST00000301843 KIF13AQ9H1H9 1805 aa16.6■□□□□ 0.25
CTTN-201ENST00000301843 CHL1O00533 1208 aa16.6■□□□□ 0.25
CTTN-201ENST00000301843 IL1RAPL2Q9NP60 686 aa16.6■□□□□ 0.25
CTTN-201ENST00000301843 MSNP26038 577 aaKnown RBP16.59■□□□□ 0.25
CTTN-201ENST00000301843 PDE1AP54750 535 aa16.59■□□□□ 0.25
CTTN-201ENST00000301843 NUCB2P80303 420 aa16.59■□□□□ 0.25
CTTN-201ENST00000301843 PNMA6EA0A0J9YXQ4 647 aa16.59■□□□□ 0.25
CTTN-201ENST00000301843 RPAP2Q8IXW5 612 aaPredicted RBP16.59■□□□□ 0.25
CTTN-201ENST00000301843 ERC2O15083 957 aa16.58■□□□□ 0.25
CTTN-201ENST00000301843 UNC5CLQ8IV45 518 aa16.58■□□□□ 0.25
CTTN-201ENST00000301843 TMEM2Q9UHN6 1383 aa16.58■□□□□ 0.25
CTTN-201ENST00000301843 UBR1Q8IWV7 1749 aa16.58■□□□□ 0.25
CTTN-201ENST00000301843 CYP2E1P05181 493 aaPredicted RBP16.58■□□□□ 0.24
CTTN-201ENST00000301843 LTV1Q96GA3 475 aaPredicted RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms