RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 ORAI2Q96SN7 254 aa27.66■■■□□ 2.02
TPM4-201ENST00000300933 RTF1Q92541 710 aaKnown RBP27.65■■■□□ 2.02
TPM4-201ENST00000300933 BRPF1P55201 1214 aaPredicted RBP27.65■■■□□ 2.02
TPM4-201ENST00000300933 LMOD2Q6P5Q4 547 aa27.65■■■□□ 2.02
TPM4-201ENST00000300933 USP19O94966 1318 aa27.65■■■□□ 2.02
TPM4-201ENST00000300933 LNPKQ9C0E8 428 aa27.64■■■□□ 2.02
TPM4-201ENST00000300933 PIK3R4Q99570 1358 aa27.64■■■□□ 2.02
TPM4-201ENST00000300933 ANKARQ7Z5J8 1434 aa27.63■■■□□ 2.01
TPM4-201ENST00000300933 IGSF1Q8N6C5 1336 aa27.62■■■□□ 2.01
TPM4-201ENST00000300933 TSPYL4Q9UJ04 414 aa27.62■■■□□ 2.01
TPM4-201ENST00000300933 ARHGEF10O15013 1369 aa27.61■■■□□ 2.01
TPM4-201ENST00000300933 ARHGAP45Q92619 1136 aa27.61■■■□□ 2.01
TPM4-201ENST00000300933 SMC5Q8IY18 1101 aa27.61■■■□□ 2.01
TPM4-201ENST00000300933 NECTIN2Q92692 538 aa27.6■■■□□ 2.01
TPM4-201ENST00000300933 RGPD1P0DJD0 1748 aa27.6■■■□□ 2.01
TPM4-201ENST00000300933 FMN2Q9NZ56 1722 aa27.59■■■□□ 2.01
TPM4-201ENST00000300933 ABCC4O15439 1325 aa27.59■■■□□ 2.01
TPM4-201ENST00000300933 SIRT2Q8IXJ6 389 aa27.59■■■□□ 2.01
TPM4-201ENST00000300933 CRB1P82279 1406 aa27.58■■■□□ 2.01
TPM4-201ENST00000300933 CHD2O14647 1828 aaKnown RBP27.58■■■□□ 2.01
TPM4-201ENST00000300933 SLC4A2P04920 1241 aa27.57■■■□□ 2
TPM4-201ENST00000300933 ANKRD45Q5TZF3 282 aa27.56■■■□□ 2
TPM4-201ENST00000300933 KDRP35968 1356 aa27.56■■■□□ 2
TPM4-201ENST00000300933 API5Q9BZZ5 524 aaKnown RBP27.55■■■□□ 2
TPM4-201ENST00000300933 G2E3Q7L622 706 aa27.55■■■□□ 2
TPM4-201ENST00000300933 NPHP4O75161 1426 aaPredicted RBP27.54■■■□□ 2
TPM4-201ENST00000300933 GAS2L2Q8NHY3 880 aa27.54■■■□□ 2
TPM4-201ENST00000300933 LRRC59Q96AG4 307 aaKnown RBP27.53■■■□□ 2
TPM4-201ENST00000300933 F6X3S4 739 aa27.53■■■□□ 2
TPM4-201ENST00000300933 NUCB1Q02818 461 aa27.53■■■□□ 2
TPM4-201ENST00000300933 PROSER2Q86WR7 435 aaPredicted RBP27.53■■■□□ 2
TPM4-201ENST00000300933 NBPF6Q5VWK0 638 aa27.52■■■□□ 2
TPM4-201ENST00000300933 IL17REQ8NFR9 667 aa27.52■■■□□ 2
TPM4-201ENST00000300933 NBPF4Q96M43 638 aa27.52■■■□□ 2
TPM4-201ENST00000300933 ADAMTSL3P82987 1691 aa27.52■■■□□ 2
TPM4-201ENST00000300933 CHD1LQ86WJ1 897 aa27.51■■□□□ 1.99
TPM4-201ENST00000300933 GNAT3A8MTJ3 354 aa27.51■■□□□ 1.99
TPM4-201ENST00000300933 SLC4A10Q6U841 1118 aa27.51■■□□□ 1.99
TPM4-201ENST00000300933 MARF1Q9Y4F3 1742 aaKnown RBP27.5■■□□□ 1.99
TPM4-201ENST00000300933 ADGRL3Q9HAR2 1447 aa27.49■■□□□ 1.99
TPM4-201ENST00000300933 MFAP1P55081 439 aaKnown RBP27.49■■□□□ 1.99
TPM4-201ENST00000300933 DDX17Q92841 729 aaKnown RBP27.49■■□□□ 1.99
TPM4-201ENST00000300933 APBB1O00213 710 aa27.47■■□□□ 1.99
TPM4-201ENST00000300933 UBE2Q2Q8WVN8 375 aa27.47■■□□□ 1.99
TPM4-201ENST00000300933 IP6K1Q92551 441 aa27.47■■□□□ 1.99
TPM4-201ENST00000300933 KIAA0232Q92628 1395 aa27.46■■□□□ 1.99
TPM4-201ENST00000300933 MEIS3Q99687 375 aa27.45■■□□□ 1.99
TPM4-201ENST00000300933 RGS12O14924 1447 aa27.44■■□□□ 1.98
TPM4-201ENST00000300933 ZNF142P52746 1687 aaPredicted RBP27.44■■□□□ 1.98
TPM4-201ENST00000300933 VIRMAQ69YN4 1812 aaKnown RBP27.44■■□□□ 1.98
TPM4-201ENST00000300933 NWD1Q149M9 1564 aa27.44■■□□□ 1.98
TPM4-201ENST00000300933 GCP02774 474 aa27.44■■□□□ 1.98
TPM4-201ENST00000300933 INTS3Q68E01 1043 aaKnown RBP27.44■■□□□ 1.98
TPM4-201ENST00000300933 UPF2Q9HAU5 1272 aaKnown RBP27.44■■□□□ 1.98
TPM4-201ENST00000300933 LGR6Q9HBX8 967 aa27.44■■□□□ 1.98
TPM4-201ENST00000300933 MSH6P52701 1360 aa27.42■■□□□ 1.98
TPM4-201ENST00000300933 CHMP4BQ9H444 224 aaKnown RBP27.41■■□□□ 1.98
TPM4-201ENST00000300933 FAM43AQ8N2R8 423 aa27.41■■□□□ 1.98
TPM4-201ENST00000300933 TBC1D32Q96NH3 1257 aa27.41■■□□□ 1.98
TPM4-201ENST00000300933 SLKQ9H2G2 1235 aaPredicted RBP27.4■■□□□ 1.98
TPM4-201ENST00000300933 HAP1P54257 671 aaPredicted RBP27.4■■□□□ 1.98
TPM4-201ENST00000300933 C16orf71Q8IYS4 520 aaPredicted RBP27.4■■□□□ 1.98
TPM4-201ENST00000300933 MAP3K5Q99683 1374 aa27.39■■□□□ 1.98
TPM4-201ENST00000300933 KRT28Q7Z3Y7 464 aa27.39■■□□□ 1.98
TPM4-201ENST00000300933 GCC1Q96CN9 775 aa27.39■■□□□ 1.98
TPM4-201ENST00000300933 AXIN2Q9Y2T1 843 aa27.39■■□□□ 1.97
TPM4-201ENST00000300933 LTN1O94822 1766 aa27.39■■□□□ 1.97
TPM4-201ENST00000300933 HSPA2P54652 639 aa27.38■■□□□ 1.97
TPM4-201ENST00000300933 ZC3H6P61129 1189 aaKnown RBP27.38■■□□□ 1.97
TPM4-201ENST00000300933 TAF7Q15545 349 aaPredicted RBP27.37■■□□□ 1.97
TPM4-201ENST00000300933 SPRYD3Q8NCJ5 442 aa27.37■■□□□ 1.97
TPM4-201ENST00000300933 KCNH5Q8NCM2 988 aa27.37■■□□□ 1.97
TPM4-201ENST00000300933 STK31Q9BXU1 1019 aa27.36■■□□□ 1.97
TPM4-201ENST00000300933 MPRIPQ6WCQ1 1025 aa27.36■■□□□ 1.97
TPM4-201ENST00000300933 PTPRCP08575 1304 aa27.36■■□□□ 1.97
TPM4-201ENST00000300933 KCNQ3O43525 872 aa27.35■■□□□ 1.97
TPM4-201ENST00000300933 SMARCA5O60264 1052 aaPredicted RBP27.35■■□□□ 1.97
TPM4-201ENST00000300933 FKBP5Q13451 457 aaPredicted RBP27.35■■□□□ 1.97
TPM4-201ENST00000300933 ARXQ96QS3 562 aa27.35■■□□□ 1.97
TPM4-201ENST00000300933 KIF24Q5T7B8 1368 aa27.35■■□□□ 1.97
TPM4-201ENST00000300933 EIF2S2P20042 333 aaKnown RBP27.35■■□□□ 1.97
TPM4-201ENST00000300933 C22orf23Q9BZE7 217 aa27.34■■□□□ 1.97
TPM4-201ENST00000300933 HTATSF1O43719 755 aaKnown RBP27.34■■□□□ 1.97
TPM4-201ENST00000300933 CEP85Q6P2H3 762 aa27.34■■□□□ 1.97
TPM4-201ENST00000300933 NFAT5O94916 1531 aa27.34■■□□□ 1.97
TPM4-201ENST00000300933 ARHGEF25Q86VW2 580 aa27.34■■□□□ 1.97
TPM4-201ENST00000300933 OTUD7AQ8TE49 926 aaPredicted RBP27.34■■□□□ 1.97
TPM4-201ENST00000300933 FLIIQ13045 1269 aa27.33■■□□□ 1.96
TPM4-201ENST00000300933 C19orf44Q9H6X5 657 aa27.32■■□□□ 1.96
TPM4-201ENST00000300933 RTL1A6NKG5 1358 aa27.32■■□□□ 1.96
TPM4-201ENST00000300933 ZNF530Q6P9A1 599 aaPredicted RBP27.32■■□□□ 1.96
TPM4-201ENST00000300933 ANKRD44Q8N8A2 993 aa27.32■■□□□ 1.96
TPM4-201ENST00000300933 ANKRD24Q8TF21 1146 aa27.32■■□□□ 1.96
TPM4-201ENST00000300933 RGPD2P0DJD1 1756 aa27.31■■□□□ 1.96
TPM4-201ENST00000300933 CABLES1Q8TDN4 633 aa27.31■■□□□ 1.96
TPM4-201ENST00000300933 DNAJC5Q9H3Z4 198 aa27.31■■□□□ 1.96
TPM4-201ENST00000300933 DCTPP1Q9H773 170 aa27.31■■□□□ 1.96
TPM4-201ENST00000300933 CCDC30Q5VVM6 783 aa27.31■■□□□ 1.96
TPM4-201ENST00000300933 PHAXQ9H814 394 aaKnown RBP27.31■■□□□ 1.96
TPM4-201ENST00000300933 ANXA1P04083 346 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms