RNA–Protein interactions for RNA: ENST00000299300.10

CCT2-201, Transcript of chaperonin containing TCP1 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT2, Length 2,041 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT2-201ENST00000299300 TTC21AQ8NDW8 1320 aa17.41■□□□□ 0.38
CCT2-201ENST00000299300 CDC45O75419 566 aa17.41■□□□□ 0.38
CCT2-201ENST00000299300 RPAP2Q8IXW5 612 aaPredicted RBP17.41■□□□□ 0.38
CCT2-201ENST00000299300 KDRP35968 1356 aa17.4■□□□□ 0.38
CCT2-201ENST00000299300 EIF5BO60841 1220 aaKnown RBP17.4■□□□□ 0.38
CCT2-201ENST00000299300 USP54Q70EL1 1684 aa17.4■□□□□ 0.38
CCT2-201ENST00000299300 GSPT1P15170 499 aaKnown RBP17.4■□□□□ 0.38
CCT2-201ENST00000299300 HSP90AB2PQ58FF8 381 aa17.4■□□□□ 0.38
CCT2-201ENST00000299300 LRRC37A3O60309 1634 aa17.39■□□□□ 0.38
CCT2-201ENST00000299300 RTN4Q9NQC3 1192 aaKnown RBP17.39■□□□□ 0.37
CCT2-201ENST00000299300 RTL1A6NKG5 1358 aa17.39■□□□□ 0.37
CCT2-201ENST00000299300 KRT24Q2M2I5 525 aa17.38■□□□□ 0.37
CCT2-201ENST00000299300 DDX11L8A8MPP1 907 aa17.38■□□□□ 0.37
CCT2-201ENST00000299300 CEP85Q6P2H3 762 aa17.38■□□□□ 0.37
CCT2-201ENST00000299300 MCM10Q7L590 875 aa17.38■□□□□ 0.37
CCT2-201ENST00000299300 DIP2AQ14689 1571 aa17.38■□□□□ 0.37
CCT2-201ENST00000299300 SBNO1A3KN83 1393 aa17.38■□□□□ 0.37
CCT2-201ENST00000299300 RGPD8O14715 1765 aaPredicted RBP17.37■□□□□ 0.37
CCT2-201ENST00000299300 TTC22Q5TAA0 569 aa17.37■□□□□ 0.37
CCT2-201ENST00000299300 PIK3C2AO00443 1686 aa17.37■□□□□ 0.37
CCT2-201ENST00000299300 TRAK2O60296 914 aa17.37■□□□□ 0.37
CCT2-201ENST00000299300 MAP3K19Q56UN5 1328 aa17.36■□□□□ 0.37
CCT2-201ENST00000299300 MSH6P52701 1360 aa17.36■□□□□ 0.37
CCT2-201ENST00000299300 MARF1Q9Y4F3 1742 aaKnown RBP17.36■□□□□ 0.37
CCT2-201ENST00000299300 RAB3GAP1Q15042 981 aa17.36■□□□□ 0.37
CCT2-201ENST00000299300 FAM43AQ8N2R8 423 aa17.36■□□□□ 0.37
CCT2-201ENST00000299300 XRN1Q8IZH2 1706 aaKnown RBP17.36■□□□□ 0.37
CCT2-201ENST00000299300 FLT4P35916 1363 aa17.36■□□□□ 0.37
CCT2-201ENST00000299300 CD2BP2O95400 341 aaKnown RBP17.35■□□□□ 0.37
CCT2-201ENST00000299300 TBX22Q9Y458 520 aa17.35■□□□□ 0.37
CCT2-201ENST00000299300 N4BP2Q86UW6 1770 aaPredicted RBP17.35■□□□□ 0.37
CCT2-201ENST00000299300 K7ELQ4 463 aaPredicted RBP17.35■□□□□ 0.37
CCT2-201ENST00000299300 IGSF1Q8N6C5 1336 aa17.35■□□□□ 0.37
CCT2-201ENST00000299300 CACNA1FO60840 1977 aa17.34■□□□□ 0.37
CCT2-201ENST00000299300 HSP90AB1P08238 724 aaKnown RBP17.34■□□□□ 0.37
CCT2-201ENST00000299300 CEP170BQ9Y4F5 1589 aaPredicted RBP17.33■□□□□ 0.37
CCT2-201ENST00000299300 TNPO1Q92973 898 aaKnown RBP17.33■□□□□ 0.37
CCT2-201ENST00000299300 MTHFSDQ2M296 383 aaKnown RBP17.33■□□□□ 0.36
CCT2-201ENST00000299300 TUBGCP6Q96RT7 1819 aa17.33■□□□□ 0.36
CCT2-201ENST00000299300 FAM208AQ9UK61 1670 aaKnown RBP17.33■□□□□ 0.36
CCT2-201ENST00000299300 HTATSF1O43719 755 aaKnown RBP17.32■□□□□ 0.36
CCT2-201ENST00000299300 CLEC17AQ6ZS10 378 aa17.32■□□□□ 0.36
CCT2-201ENST00000299300 MEIS3Q99687 375 aa17.32■□□□□ 0.36
CCT2-201ENST00000299300 GOLGA6L3A6NEY3 463 aa17.31■□□□□ 0.36
CCT2-201ENST00000299300 XRCC6P12956 609 aaKnown RBP eCLIP17.31■□□□□ 0.36
CCT2-201ENST00000299300 C16orf71Q8IYS4 520 aaPredicted RBP17.31■□□□□ 0.36
CCT2-201ENST00000299300 AMOTL2Q9Y2J4 779 aa17.31■□□□□ 0.36
CCT2-201ENST00000299300 NWD1Q149M9 1564 aa17.31■□□□□ 0.36
CCT2-201ENST00000299300 ANKARQ7Z5J8 1434 aa17.31■□□□□ 0.36
CCT2-201ENST00000299300 USP26Q9BXU7 913 aa17.31■□□□□ 0.36
CCT2-201ENST00000299300 SLC4A2P04920 1241 aa17.3■□□□□ 0.36
CCT2-201ENST00000299300 RABEP1Q15276 862 aa17.3■□□□□ 0.36
CCT2-201ENST00000299300 SLC26A8Q96RN1 970 aa17.3■□□□□ 0.36
CCT2-201ENST00000299300 RBM42Q9BTD8 480 aaKnown RBP17.3■□□□□ 0.36
CCT2-201ENST00000299300 ISY1Q9ULR0 285 aaKnown RBP17.3■□□□□ 0.36
CCT2-201ENST00000299300 EID1Q9Y6B2 187 aa17.3■□□□□ 0.36
CCT2-201ENST00000299300 NUTM2FA1L443 756 aa17.3■□□□□ 0.36
CCT2-201ENST00000299300 FOXO3O43524 673 aa17.3■□□□□ 0.36
CCT2-201ENST00000299300 PTMSP20962 102 aa17.3■□□□□ 0.36
CCT2-201ENST00000299300 CCT4P50991 539 aaKnown RBP17.29■□□□□ 0.36
CCT2-201ENST00000299300 GAS2L2Q8NHY3 880 aa17.29■□□□□ 0.36
CCT2-201ENST00000299300 OTUD7AQ8TE49 926 aaPredicted RBP17.29■□□□□ 0.36
CCT2-201ENST00000299300 GBP4Q96PP9 640 aa17.29■□□□□ 0.36
CCT2-201ENST00000299300 EYA1Q99502 592 aa17.29■□□□□ 0.36
CCT2-201ENST00000299300 OSBPL3Q9H4L5 887 aa17.29■□□□□ 0.36
CCT2-201ENST00000299300 G2E3Q7L622 706 aa17.28■□□□□ 0.36
CCT2-201ENST00000299300 SOS1Q07889 1333 aaPredicted RBP17.28■□□□□ 0.36
CCT2-201ENST00000299300 TSPYL4Q9UJ04 414 aa17.28■□□□□ 0.36
CCT2-201ENST00000299300 SDSP20132 328 aa17.27■□□□□ 0.36
CCT2-201ENST00000299300 RTF1Q92541 710 aaKnown RBP17.27■□□□□ 0.36
CCT2-201ENST00000299300 HMMRO75330 724 aa17.26■□□□□ 0.35
CCT2-201ENST00000299300 SKOR2Q2VWA4 1001 aaPredicted RBP17.26■□□□□ 0.35
CCT2-201ENST00000299300 MIS18AQ9NYP9 233 aa17.26■□□□□ 0.35
CCT2-201ENST00000299300 SMARCA5O60264 1052 aaPredicted RBP17.25■□□□□ 0.35
CCT2-201ENST00000299300 MRE11P49959 708 aa17.25■□□□□ 0.35
CCT2-201ENST00000299300 BABAM1Q9NWV8 329 aa17.25■□□□□ 0.35
CCT2-201ENST00000299300 FER1L4A9Z1Z3 1794 aa17.25■□□□□ 0.35
CCT2-201ENST00000299300 SALL3Q9BXA9 1300 aa17.25■□□□□ 0.35
CCT2-201ENST00000299300 CEBPAP49715 358 aaPredicted RBP17.25■□□□□ 0.35
CCT2-201ENST00000299300 GZF1Q9H116 711 aaPredicted RBP17.25■□□□□ 0.35
CCT2-201ENST00000299300 NGDNQ8NEJ9 315 aaKnown RBP17.24■□□□□ 0.35
CCT2-201ENST00000299300 PXDNLA1KZ92 1463 aa17.24■□□□□ 0.35
CCT2-201ENST00000299300 AMPHP49418 695 aa17.23■□□□□ 0.35
CCT2-201ENST00000299300 F6X3S4 739 aa17.22■□□□□ 0.35
CCT2-201ENST00000299300 SOX12O15370 315 aa17.22■□□□□ 0.35
CCT2-201ENST00000299300 GNAI2P04899 355 aa17.22■□□□□ 0.35
CCT2-201ENST00000299300 CYP2E1P05181 493 aaPredicted RBP17.22■□□□□ 0.35
CCT2-201ENST00000299300 CASC1Q6TDU7 716 aa17.22■□□□□ 0.35
CCT2-201ENST00000299300 SSFA2P28290 1259 aa17.21■□□□□ 0.35
CCT2-201ENST00000299300 HOXC9P31274 260 aa17.21■□□□□ 0.35
CCT2-201ENST00000299300 PDE1AP54750 535 aa17.21■□□□□ 0.35
CCT2-201ENST00000299300 GNAT3A8MTJ3 354 aa17.21■□□□□ 0.35
CCT2-201ENST00000299300 HSP90AA1P07900 732 aaKnown RBP17.21■□□□□ 0.35
CCT2-201ENST00000299300 THEMISQ8N1K5 641 aaPredicted RBP17.21■□□□□ 0.35
CCT2-201ENST00000299300 REC8O95072 547 aa17.2■□□□□ 0.34
CCT2-201ENST00000299300 CCDC30Q5VVM6 783 aa17.2■□□□□ 0.34
CCT2-201ENST00000299300 STK31Q9BXU1 1019 aa17.2■□□□□ 0.34
CCT2-201ENST00000299300 PANK2Q9BZ23 570 aa17.2■□□□□ 0.34
CCT2-201ENST00000299300 GRPEL1Q9HAV7 217 aa17.2■□□□□ 0.34
CCT2-201ENST00000299300 MAP3K5Q99683 1374 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms