RNA–Protein interactions for RNA: ENST00000298852.7

PSMC3-201, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PSMC3, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-201ENST00000298852 TATP17735 454 aaPredicted RBP21.8■■□□□ 1.08
PSMC3-201ENST00000298852 THSD7AQ9UPZ6 1657 aa21.8■■□□□ 1.08
PSMC3-201ENST00000298852 AMOTQ4VCS5 1084 aa21.8■■□□□ 1.08
PSMC3-201ENST00000298852 USP35Q9P2H5 1018 aa21.8■■□□□ 1.08
PSMC3-201ENST00000298852 MAPK8IP3Q9UPT6 1336 aa21.79■■□□□ 1.08
PSMC3-201ENST00000298852 ONECUT3O60422 494 aaPredicted RBP21.78■■□□□ 1.08
PSMC3-201ENST00000298852 PHF23Q9BUL5 403 aaPredicted RBP21.78■■□□□ 1.08
PSMC3-201ENST00000298852 RGS17Q9UGC6 210 aaPredicted RBP21.77■■□□□ 1.08
PSMC3-201ENST00000298852 RBM6P78332 1123 aaKnown RBP21.76■■□□□ 1.07
PSMC3-201ENST00000298852 PLEKHO1Q53GL0 409 aaPredicted RBP21.76■■□□□ 1.07
PSMC3-201ENST00000298852 LRRC37A3O60309 1634 aa21.76■■□□□ 1.07
PSMC3-201ENST00000298852 SHANK3Q9BYB0 1731 aa21.76■■□□□ 1.07
PSMC3-201ENST00000298852 NCBP3Q53F19 620 aaKnown RBP21.75■■□□□ 1.07
PSMC3-201ENST00000298852 NGEFQ8N5V2 710 aa21.75■■□□□ 1.07
PSMC3-201ENST00000298852 SPG7Q9UQ90 795 aa21.75■■□□□ 1.07
PSMC3-201ENST00000298852 TNS2Q63HR2 1409 aa21.75■■□□□ 1.07
PSMC3-201ENST00000298852 GAS2L2Q8NHY3 880 aa21.75■■□□□ 1.07
PSMC3-201ENST00000298852 DLG5Q8TDM6 1919 aa21.75■■□□□ 1.07
PSMC3-201ENST00000298852 PHACTR3Q96KR7 559 aa21.75■■□□□ 1.07
PSMC3-201ENST00000298852 CCDC146Q8IYE0 955 aa21.74■■□□□ 1.07
PSMC3-201ENST00000298852 FAM98CQ17RN3 349 aaKnown RBP21.73■■□□□ 1.07
PSMC3-201ENST00000298852 ZCRB1Q8TBF4 217 aaKnown RBP21.73■■□□□ 1.07
PSMC3-201ENST00000298852 PCDH11XQ9BZA7 1347 aa21.71■■□□□ 1.07
PSMC3-201ENST00000298852 PCDH11YQ9BZA8 1340 aa21.71■■□□□ 1.07
PSMC3-201ENST00000298852 NFE2L2Q16236 605 aa21.71■■□□□ 1.07
PSMC3-201ENST00000298852 MTHFSDQ2M296 383 aaKnown RBP21.7■■□□□ 1.07
PSMC3-201ENST00000298852 EXOC5O00471 708 aa21.7■■□□□ 1.06
PSMC3-201ENST00000298852 APAF1O14727 1248 aa21.7■■□□□ 1.06
PSMC3-201ENST00000298852 RXRBP28702 533 aa21.7■■□□□ 1.06
PSMC3-201ENST00000298852 TMPOP42166 694 aaKnown RBP21.7■■□□□ 1.06
PSMC3-201ENST00000298852 DDB1Q16531 1140 aa21.7■■□□□ 1.06
PSMC3-201ENST00000298852 ADAMTS7Q9UKP4 1686 aa21.68■■□□□ 1.06
PSMC3-201ENST00000298852 VIRMAQ69YN4 1812 aaKnown RBP21.68■■□□□ 1.06
PSMC3-201ENST00000298852 ZNF530Q6P9A1 599 aaPredicted RBP21.68■■□□□ 1.06
PSMC3-201ENST00000298852 POTEAQ6S8J7 498 aa21.68■■□□□ 1.06
PSMC3-201ENST00000298852 HTATSF1O43719 755 aaKnown RBP21.67■■□□□ 1.06
PSMC3-201ENST00000298852 AKAP4Q5JQC9 854 aa21.67■■□□□ 1.06
PSMC3-201ENST00000298852 IFNL2Q8IZJ0 200 aa21.67■■□□□ 1.06
PSMC3-201ENST00000298852 MAP3K5Q99683 1374 aa21.67■■□□□ 1.06
PSMC3-201ENST00000298852 LMOD3Q0VAK6 560 aa21.66■■□□□ 1.06
PSMC3-201ENST00000298852 CCDC27Q2M243 656 aa21.66■■□□□ 1.06
PSMC3-201ENST00000298852 C1orf141Q5JVX7 400 aa21.66■■□□□ 1.06
PSMC3-201ENST00000298852 SCN11AQ9UI33 1791 aa21.66■■□□□ 1.06
PSMC3-201ENST00000298852 CYP27B1O15528 508 aa21.65■■□□□ 1.06
PSMC3-201ENST00000298852 PHKG2P15735 406 aa21.65■■□□□ 1.06
PSMC3-201ENST00000298852 BRWD3Q6RI45 1802 aa21.65■■□□□ 1.06
PSMC3-201ENST00000298852 GNAT3A8MTJ3 354 aa21.65■■□□□ 1.06
PSMC3-201ENST00000298852 HSP90AB1P08238 724 aaKnown RBP21.65■■□□□ 1.06
PSMC3-201ENST00000298852 RIPK4P57078 832 aa21.65■■□□□ 1.06
PSMC3-201ENST00000298852 NKX1-1Q15270 411 aaPredicted RBP21.65■■□□□ 1.06
PSMC3-201ENST00000298852 SEPT12Q8IYM1 358 aa21.65■■□□□ 1.06
PSMC3-201ENST00000298852 BCL9O00512 1426 aa21.63■■□□□ 1.05
PSMC3-201ENST00000298852 A0A0G2JS52 829 aa21.62■■□□□ 1.05
PSMC3-201ENST00000298852 MYT1Q01538 1121 aa21.62■■□□□ 1.05
PSMC3-201ENST00000298852 DCAF5Q96JK2 942 aa21.61■■□□□ 1.05
PSMC3-201ENST00000298852 RGS12O14924 1447 aa21.61■■□□□ 1.05
PSMC3-201ENST00000298852 CEMIPQ8WUJ3 1361 aa21.61■■□□□ 1.05
PSMC3-201ENST00000298852 PDE3BQ13370 1112 aa21.6■■□□□ 1.05
PSMC3-201ENST00000298852 RTF1Q92541 710 aaKnown RBP21.6■■□□□ 1.05
PSMC3-201ENST00000298852 TRIM35Q9UPQ4 493 aa21.6■■□□□ 1.05
PSMC3-201ENST00000298852 RRP7AQ9Y3A4 280 aaKnown RBP21.6■■□□□ 1.05
PSMC3-201ENST00000298852 HNRNPUQ00839 825 aaKnown RBP eCLIP21.6■■□□□ 1.05
PSMC3-201ENST00000298852 MARCH10Q8NA82 808 aaPredicted RBP21.6■■□□□ 1.05
PSMC3-201ENST00000298852 DDX54Q8TDD1 881 aaKnown RBP21.6■■□□□ 1.05
PSMC3-201ENST00000298852 KDM6AO15550 1401 aaPredicted RBP21.59■■□□□ 1.05
PSMC3-201ENST00000298852 NEUROD2Q15784 382 aa21.59■■□□□ 1.05
PSMC3-201ENST00000298852 MRC1P22897 1456 aa21.58■■□□□ 1.05
PSMC3-201ENST00000298852 WWC1Q8IX03 1113 aa21.58■■□□□ 1.04
PSMC3-201ENST00000298852 ZNF521Q96K83 1311 aa21.58■■□□□ 1.04
PSMC3-201ENST00000298852 ZBED9Q6R2W3 1325 aa21.57■■□□□ 1.04
PSMC3-201ENST00000298852 TOGARAM1Q9Y4F4 1720 aa21.57■■□□□ 1.04
PSMC3-201ENST00000298852 SIPA1L3O60292 1781 aaPredicted RBP21.57■■□□□ 1.04
PSMC3-201ENST00000298852 CALD1Q05682 793 aaKnown RBP21.56■■□□□ 1.04
PSMC3-201ENST00000298852 KRT27Q7Z3Y8 459 aa21.56■■□□□ 1.04
PSMC3-201ENST00000298852 KAT6BQ8WYB5 2073 aa21.56■■□□□ 1.04
PSMC3-201ENST00000298852 ERVV-2B6SEH9 535 aa21.55■■□□□ 1.04
PSMC3-201ENST00000298852 RNMTO43148 476 aaKnown RBP21.55■■□□□ 1.04
PSMC3-201ENST00000298852 IL17REQ8NFR9 667 aa21.55■■□□□ 1.04
PSMC3-201ENST00000298852 DOT1LQ8TEK3 1739 aa21.55■■□□□ 1.04
PSMC3-201ENST00000298852 ITGB4P16144 1822 aa21.55■■□□□ 1.04
PSMC3-201ENST00000298852 SBF2Q86WG5 1849 aa21.55■■□□□ 1.04
PSMC3-201ENST00000298852 MPRIPQ6WCQ1 1025 aa21.55■■□□□ 1.04
PSMC3-201ENST00000298852 WDR63Q8IWG1 891 aa21.55■■□□□ 1.04
PSMC3-201ENST00000298852 IL16Q14005 1332 aa21.54■■□□□ 1.04
PSMC3-201ENST00000298852 MCM10Q7L590 875 aa21.52■■□□□ 1.04
PSMC3-201ENST00000298852 LGR6Q9HBX8 967 aa21.52■■□□□ 1.04
PSMC3-201ENST00000298852 BABAM1Q9NWV8 329 aa21.51■■□□□ 1.03
PSMC3-201ENST00000298852 NHSQ6T4R5 1651 aa21.51■■□□□ 1.03
PSMC3-201ENST00000298852 DCTN1Q14203 1278 aa21.5■■□□□ 1.03
PSMC3-201ENST00000298852 FAM196AQ6ZSG2 479 aa21.5■■□□□ 1.03
PSMC3-201ENST00000298852 SLC52A2Q9HAB3 445 aa21.5■■□□□ 1.03
PSMC3-201ENST00000298852 TEFQ10587 303 aa21.5■■□□□ 1.03
PSMC3-201ENST00000298852 SALL2Q9Y467 1007 aaPredicted RBP21.5■■□□□ 1.03
PSMC3-201ENST00000298852 EP400Q96L91 3159 aa21.49■■□□□ 1.03
PSMC3-201ENST00000298852 SENP3-EIF4A1A0A087X0R7 540 aa21.48■■□□□ 1.03
PSMC3-201ENST00000298852 THUMPD2Q9BTF0 503 aaKnown RBP21.48■■□□□ 1.03
PSMC3-201ENST00000298852 CABP4P57796 275 aa21.47■■□□□ 1.03
PSMC3-201ENST00000298852 GOLGA2Q08379 1002 aa21.47■■□□□ 1.03
PSMC3-201ENST00000298852 TAF7Q15545 349 aaPredicted RBP21.47■■□□□ 1.03
PSMC3-201ENST00000298852 CFAP44Q96MT7 982 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms