RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 MEGF6O75095 1541 aa16.32■□□□□ 0.2
HMGB2-201ENST00000296503 KAT6BQ8WYB5 2073 aa16.32■□□□□ 0.2
HMGB2-201ENST00000296503 RGPD1P0DJD0 1748 aa16.31■□□□□ 0.2
HMGB2-201ENST00000296503 GTF3C3Q9Y5Q9 886 aa16.31■□□□□ 0.2
HMGB2-201ENST00000296503 EZH2Q15910 746 aaKnown RBP16.31■□□□□ 0.2
HMGB2-201ENST00000296503 PTF1AQ7RTS3 328 aa16.3■□□□□ 0.2
HMGB2-201ENST00000296503 KCNQ2O43526 872 aa16.29■□□□□ 0.2
HMGB2-201ENST00000296503 IL13P35225 146 aa16.29■□□□□ 0.2
HMGB2-201ENST00000296503 SPG7Q9UQ90 795 aa16.29■□□□□ 0.2
HMGB2-201ENST00000296503 BCL9O00512 1426 aa16.29■□□□□ 0.2
HMGB2-201ENST00000296503 DIAPH1O60610 1272 aaKnown RBP16.29■□□□□ 0.2
HMGB2-201ENST00000296503 CAMKK2Q96RR4 588 aa16.29■□□□□ 0.2
HMGB2-201ENST00000296503 IGSF1Q8N6C5 1336 aa16.28■□□□□ 0.2
HMGB2-201ENST00000296503 SULT6B1Q6IMI4 303 aa16.27■□□□□ 0.2
HMGB2-201ENST00000296503 SYTL4Q96C24 671 aaPredicted RBP16.27■□□□□ 0.2
HMGB2-201ENST00000296503 PCDH11XQ9BZA7 1347 aa16.27■□□□□ 0.19
HMGB2-201ENST00000296503 PCDH11YQ9BZA8 1340 aa16.27■□□□□ 0.19
HMGB2-201ENST00000296503 SBF2Q86WG5 1849 aa16.26■□□□□ 0.19
HMGB2-201ENST00000296503 PPP2R1AP30153 589 aa16.26■□□□□ 0.19
HMGB2-201ENST00000296503 CFAP53Q96M91 514 aa16.26■□□□□ 0.19
HMGB2-201ENST00000296503 TNS1Q9HBL0 1735 aaKnown RBP16.25■□□□□ 0.19
HMGB2-201ENST00000296503 PLSCR1O15162 318 aa16.25■□□□□ 0.19
HMGB2-201ENST00000296503 PRIM1P49642 420 aaKnown RBP16.25■□□□□ 0.19
HMGB2-201ENST00000296503 AEBP1Q8IUX7 1158 aa16.25■□□□□ 0.19
HMGB2-201ENST00000296503 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.25■□□□□ 0.196e-9■■■□□ 16.1
HMGB2-201ENST00000296503 NCAPD2Q15021 1401 aa16.25■□□□□ 0.19
HMGB2-201ENST00000296503 CYP27B1O15528 508 aa16.25■□□□□ 0.19
HMGB2-201ENST00000296503 PLEKHO1Q53GL0 409 aaPredicted RBP16.25■□□□□ 0.19
HMGB2-201ENST00000296503 U2SURPO15042 1029 aaKnown RBP16.24■□□□□ 0.19
HMGB2-201ENST00000296503 HMOX1P09601 288 aa16.23■□□□□ 0.19
HMGB2-201ENST00000296503 IFNL2Q8IZJ0 200 aa16.22■□□□□ 0.19
HMGB2-201ENST00000296503 PARD3Q8TEW0 1356 aa16.22■□□□□ 0.19
HMGB2-201ENST00000296503 AMOTQ4VCS5 1084 aa16.22■□□□□ 0.19
HMGB2-201ENST00000296503 ZNF316A6NFI3 1004 aaPredicted RBP16.21■□□□□ 0.19
HMGB2-201ENST00000296503 NBPF14Q5TI25 921 aa16.2■□□□□ 0.18
HMGB2-201ENST00000296503 NUDCQ9Y266 331 aa16.2■□□□□ 0.18
HMGB2-201ENST00000296503 SHANK3Q9BYB0 1731 aa16.2■□□□□ 0.18
HMGB2-201ENST00000296503 PHKG2P15735 406 aa16.2■□□□□ 0.18
HMGB2-201ENST00000296503 MPRIPQ6WCQ1 1025 aa16.2■□□□□ 0.18
HMGB2-201ENST00000296503 NKX1-1Q15270 411 aaPredicted RBP16.19■□□□□ 0.18
HMGB2-201ENST00000296503 RALBP1Q15311 655 aa16.19■□□□□ 0.18
HMGB2-201ENST00000296503 TXNRD1Q16881 649 aa16.19■□□□□ 0.18
HMGB2-201ENST00000296503 ZNF530Q6P9A1 599 aaPredicted RBP16.19■□□□□ 0.18
HMGB2-201ENST00000296503 PROM2Q8N271 834 aa16.19■□□□□ 0.18
HMGB2-201ENST00000296503 NHSQ6T4R5 1651 aa16.19■□□□□ 0.18
HMGB2-201ENST00000296503 KDRP35968 1356 aa16.18■□□□□ 0.18
HMGB2-201ENST00000296503 PSDA5PKW4 1024 aaPredicted RBP16.18■□□□□ 0.18
HMGB2-201ENST00000296503 C1orf141Q5JVX7 400 aa16.18■□□□□ 0.18
HMGB2-201ENST00000296503 PKD1L3Q7Z443 1732 aa16.17■□□□□ 0.18
HMGB2-201ENST00000296503 HSP90AB1P08238 724 aaKnown RBP16.17■□□□□ 0.18
HMGB2-201ENST00000296503 R3HDM1Q15032 1099 aaKnown RBP16.17■□□□□ 0.18
HMGB2-201ENST00000296503 PLEKHG2Q9H7P9 1386 aa16.17■□□□□ 0.18
HMGB2-201ENST00000296503 U2AF1L5P0DN76 240 aaPredicted RBP16.16■□□□□ 0.18
HMGB2-201ENST00000296503 U2AF1Q01081 240 aaKnown RBP eCLIP16.16■□□□□ 0.184e-7■□□□□ 8.9
HMGB2-201ENST00000296503 COL3A1P02461 1466 aaPredicted RBP16.15■□□□□ 0.18
HMGB2-201ENST00000296503 DOT1LQ8TEK3 1739 aa16.15■□□□□ 0.18
HMGB2-201ENST00000296503 BTAF1O14981 1849 aa16.15■□□□□ 0.18
HMGB2-201ENST00000296503 DCAF5Q96JK2 942 aa16.14■□□□□ 0.17
HMGB2-201ENST00000296503 TMOD3Q9NYL9 352 aa16.14■□□□□ 0.17
HMGB2-201ENST00000296503 PIGBQ92521 554 aa16.14■□□□□ 0.17
HMGB2-201ENST00000296503 MTHFSDQ2M296 383 aaKnown RBP16.12■□□□□ 0.17
HMGB2-201ENST00000296503 AKAP4Q5JQC9 854 aa16.12■□□□□ 0.17
HMGB2-201ENST00000296503 ERVV-2B6SEH9 535 aa16.12■□□□□ 0.17
HMGB2-201ENST00000296503 CABP4P57796 275 aa16.12■□□□□ 0.17
HMGB2-201ENST00000296503 SLC27A3Q5K4L6 730 aa16.12■□□□□ 0.17
HMGB2-201ENST00000296503 STK32BQ9NY57 414 aa16.12■□□□□ 0.17
HMGB2-201ENST00000296503 RREB1Q92766 1687 aa16.11■□□□□ 0.17
HMGB2-201ENST00000296503 PRKAR2BP31323 418 aa16.11■□□□□ 0.17
HMGB2-201ENST00000296503 KCNQ4P56696 695 aa16.11■□□□□ 0.17
HMGB2-201ENST00000296503 SMARCC1Q92922 1105 aaPredicted RBP16.11■□□□□ 0.17
HMGB2-201ENST00000296503 LRRC4BQ9NT99 713 aa16.11■□□□□ 0.17
HMGB2-201ENST00000296503 RGPD3A6NKT7 1758 aaPredicted RBP16.11■□□□□ 0.17
HMGB2-201ENST00000296503 RGPD4Q7Z3J3 1758 aa16.11■□□□□ 0.17
HMGB2-201ENST00000296503 MYBBP1AQ9BQG0 1328 aaKnown RBP16.1■□□□□ 0.17
HMGB2-201ENST00000296503 FCHSD2O94868 740 aa16.1■□□□□ 0.17
HMGB2-201ENST00000296503 CCNL1Q9UK58 526 aaPredicted RBP16.1■□□□□ 0.17
HMGB2-201ENST00000296503 NUP188Q5SRE5 1749 aa16.1■□□□□ 0.17
HMGB2-201ENST00000296503 RSPH6AQ9H0K4 717 aa16.1■□□□□ 0.17
HMGB2-201ENST00000296503 PRKRIP1Q9H875 184 aaPredicted RBP16.1■□□□□ 0.17
HMGB2-201ENST00000296503 ANO8Q9HCE9 1232 aaPredicted RBP16.1■□□□□ 0.17
HMGB2-201ENST00000296503 ITGB4P16144 1822 aa16.09■□□□□ 0.17
HMGB2-201ENST00000296503 SLC15A2Q16348 729 aa16.08■□□□□ 0.17
HMGB2-201ENST00000296503 NFATC2IPQ8NCF5 419 aa16.08■□□□□ 0.17
HMGB2-201ENST00000296503 GAS2L2Q8NHY3 880 aa16.08■□□□□ 0.17
HMGB2-201ENST00000296503 PHACTR3Q96KR7 559 aa16.08■□□□□ 0.17
HMGB2-201ENST00000296503 LGR6Q9HBX8 967 aa16.08■□□□□ 0.17
HMGB2-201ENST00000296503 ASAP1Q9ULH1 1129 aa16.08■□□□□ 0.17
HMGB2-201ENST00000296503 NEFMP07197 916 aa16.08■□□□□ 0.16
HMGB2-201ENST00000296503 TOGARAM1Q9Y4F4 1720 aa16.07■□□□□ 0.16
HMGB2-201ENST00000296503 PALLDQ8WX93 1383 aa16.07■□□□□ 0.16
HMGB2-201ENST00000296503 KDM6AO15550 1401 aaPredicted RBP16.06■□□□□ 0.16
HMGB2-201ENST00000296503 RNMTO43148 476 aaKnown RBP16.06■□□□□ 0.16
HMGB2-201ENST00000296503 ATG3Q9NT62 314 aa16.06■□□□□ 0.16
HMGB2-201ENST00000296503 GNAT3A8MTJ3 354 aa16.05■□□□□ 0.16
HMGB2-201ENST00000296503 HMGB2P26583 209 aaKnown RBP16.05■□□□□ 0.16
HMGB2-201ENST00000296503 RBM42Q9BTD8 480 aaKnown RBP16.05■□□□□ 0.16
HMGB2-201ENST00000296503 PNNQ9H307 717 aaKnown RBP16.05■□□□□ 0.16
HMGB2-201ENST00000296503 LOC102724428A0A0B4J2F2 783 aa16.03■□□□□ 0.16
HMGB2-201ENST00000296503 SIK1P57059 783 aa16.03■□□□□ 0.16
HMGB2-201ENST00000296503 SLC52A2Q9HAB3 445 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms