RNA–Protein interactions for RNA: ENST00000287600.8

PDE6D-201, Transcript of phosphodiesterase 6D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6D, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-201ENST00000287600 DDX54Q8TDD1 881 aaKnown RBP21.19■□□□□ 0.98
PDE6D-201ENST00000287600 KIF20BQ96Q89 1820 aa21.19■□□□□ 0.98
PDE6D-201ENST00000287600 RTL1A6NKG5 1358 aa21.18■□□□□ 0.98
PDE6D-201ENST00000287600 SHANK3Q9BYB0 1731 aa21.18■□□□□ 0.98
PDE6D-201ENST00000287600 FBLN1P23142 703 aa21.17■□□□□ 0.98
PDE6D-201ENST00000287600 PTGER2P43116 358 aa21.17■□□□□ 0.98
PDE6D-201ENST00000287600 MTFR1LQ9H019 292 aa21.17■□□□□ 0.98
PDE6D-201ENST00000287600 CDCA8Q53HL2 280 aa21.16■□□□□ 0.98
PDE6D-201ENST00000287600 HSPA5P11021 654 aaKnown RBP21.15■□□□□ 0.98
PDE6D-201ENST00000287600 MEGF6O75095 1541 aa21.14■□□□□ 0.98
PDE6D-201ENST00000287600 SMG6Q86US8 1419 aaKnown RBP21.14■□□□□ 0.98
PDE6D-201ENST00000287600 RRS1Q15050 365 aaKnown RBP21.14■□□□□ 0.97
PDE6D-201ENST00000287600 SYTL4Q96C24 671 aaPredicted RBP21.14■□□□□ 0.97
PDE6D-201ENST00000287600 GGNBP2Q9H3C7 697 aa21.14■□□□□ 0.97
PDE6D-201ENST00000287600 QSER1Q2KHR3 1735 aa21.12■□□□□ 0.97
PDE6D-201ENST00000287600 ZNF827Q17R98 1081 aa21.12■□□□□ 0.97
PDE6D-201ENST00000287600 LRRC4BQ9NT99 713 aa21.12■□□□□ 0.97
PDE6D-201ENST00000287600 FYB1O15117 783 aa21.11■□□□□ 0.97
PDE6D-201ENST00000287600 SLC27A3Q5K4L6 730 aa21.1■□□□□ 0.97
PDE6D-201ENST00000287600 ZCRB1Q8TBF4 217 aaKnown RBP21.1■□□□□ 0.97
PDE6D-201ENST00000287600 FHDC1Q9C0D6 1143 aaPredicted RBP21.1■□□□□ 0.97
PDE6D-201ENST00000287600 LY75O60449 1722 aa21.09■□□□□ 0.97
PDE6D-201ENST00000287600 TUBGCP6Q96RT7 1819 aa21.09■□□□□ 0.97
PDE6D-201ENST00000287600 PRIM1P49642 420 aaKnown RBP21.08■□□□□ 0.97
PDE6D-201ENST00000287600 USHBP1Q8N6Y0 703 aa21.08■□□□□ 0.97
PDE6D-201ENST00000287600 SGIP1Q9BQI5 828 aa21.08■□□□□ 0.97
PDE6D-201ENST00000287600 NSD2O96028 1365 aa21.08■□□□□ 0.96
PDE6D-201ENST00000287600 NBPF6Q5VWK0 638 aa21.07■□□□□ 0.96
PDE6D-201ENST00000287600 NBPF4Q96M43 638 aa21.07■□□□□ 0.96
PDE6D-201ENST00000287600 SYT17Q9BSW7 474 aa21.07■□□□□ 0.96
PDE6D-201ENST00000287600 POLR3GLQ9BT43 218 aa21.07■□□□□ 0.96
PDE6D-201ENST00000287600 RAPGEF4Q8WZA2 1011 aa21.06■□□□□ 0.96
PDE6D-201ENST00000287600 AKT1S1Q96B36 256 aa21.06■□□□□ 0.96
PDE6D-201ENST00000287600 ARXQ96QS3 562 aa21.06■□□□□ 0.96
PDE6D-201ENST00000287600 FLT4P35916 1363 aa21.06■□□□□ 0.96
PDE6D-201ENST00000287600 CGNL1Q0VF96 1302 aa21.05■□□□□ 0.96
PDE6D-201ENST00000287600 NSD3Q9BZ95 1437 aa21.05■□□□□ 0.96
PDE6D-201ENST00000287600 INSRP06213 1382 aa21.05■□□□□ 0.96
PDE6D-201ENST00000287600 TATP17735 454 aaPredicted RBP21.04■□□□□ 0.96
PDE6D-201ENST00000287600 KCNQ4P56696 695 aa21.04■□□□□ 0.96
PDE6D-201ENST00000287600 KIF24Q5T7B8 1368 aa21.03■□□□□ 0.96
PDE6D-201ENST00000287600 HSP90AB2PQ58FF8 381 aa21.03■□□□□ 0.96
PDE6D-201ENST00000287600 TFCP2L1Q9NZI6 479 aa21.03■□□□□ 0.96
PDE6D-201ENST00000287600 PNPLA7Q6ZV29 1317 aa21.03■□□□□ 0.96
PDE6D-201ENST00000287600 CCNL1Q9UK58 526 aaPredicted RBP21.02■□□□□ 0.96
PDE6D-201ENST00000287600 COL24A1Q17RW2 1714 aa21.01■□□□□ 0.95
PDE6D-201ENST00000287600 MAP3K5Q99683 1374 aa21.01■□□□□ 0.95
PDE6D-201ENST00000287600 SLC16A10Q8TF71 515 aa21.01■□□□□ 0.95
PDE6D-201ENST00000287600 PCDH11XQ9BZA7 1347 aa21.01■□□□□ 0.95
PDE6D-201ENST00000287600 PCDH11YQ9BZA8 1340 aa21.01■□□□□ 0.95
PDE6D-201ENST00000287600 POLD1P28340 1107 aa21■□□□□ 0.95
PDE6D-201ENST00000287600 KLHL34Q8N239 644 aa21■□□□□ 0.95
PDE6D-201ENST00000287600 ANKRD26Q9UPS8 1709 aa21■□□□□ 0.95
PDE6D-201ENST00000287600 C5P01031 1676 aa20.99■□□□□ 0.95
PDE6D-201ENST00000287600 CARD14Q9BXL6 1004 aa20.99■□□□□ 0.95
PDE6D-201ENST00000287600 PKD1L3Q7Z443 1732 aa20.98■□□□□ 0.95
PDE6D-201ENST00000287600 CHD4Q14839 1912 aa20.98■□□□□ 0.95
PDE6D-201ENST00000287600 EMILIN1Q9Y6C2 1016 aa20.98■□□□□ 0.95
PDE6D-201ENST00000287600 TOGARAM1Q9Y4F4 1720 aa20.98■□□□□ 0.95
PDE6D-201ENST00000287600 PPM1GO15355 546 aaPredicted RBP20.96■□□□□ 0.95
PDE6D-201ENST00000287600 ITGB4P16144 1822 aa20.95■□□□□ 0.94
PDE6D-201ENST00000287600 MAP2P11137 1827 aaKnown RBP20.94■□□□□ 0.94
PDE6D-201ENST00000287600 TAF1LQ8IZX4 1826 aa20.94■□□□□ 0.94
PDE6D-201ENST00000287600 PALLDQ8WX93 1383 aa20.94■□□□□ 0.94
PDE6D-201ENST00000287600 CYP27B1O15528 508 aa20.92■□□□□ 0.94
PDE6D-201ENST00000287600 GPR162Q16538 588 aa20.92■□□□□ 0.94
PDE6D-201ENST00000287600 MPRIPQ6WCQ1 1025 aa20.92■□□□□ 0.94
PDE6D-201ENST00000287600 NCAPD2Q15021 1401 aa20.92■□□□□ 0.94
PDE6D-201ENST00000287600 UTRNP46939 3433 aa20.92■□□□□ 0.94
PDE6D-201ENST00000287600 ZNF784Q8NCA9 323 aaPredicted RBP20.91■□□□□ 0.94
PDE6D-201ENST00000287600 KIF7Q2M1P5 1343 aa20.9■□□□□ 0.94
PDE6D-201ENST00000287600 PELP1Q8IZL8 1130 aaKnown RBP20.9■□□□□ 0.94
PDE6D-201ENST00000287600 PANK3Q9H999 370 aa20.9■□□□□ 0.94
PDE6D-201ENST00000287600 COL23A1Q86Y22 540 aaPredicted RBP20.89■□□□□ 0.93
PDE6D-201ENST00000287600 C4BP0C0L5 1744 aa20.89■□□□□ 0.93
PDE6D-201ENST00000287600 WASHC2AQ641Q2 1341 aa20.88■□□□□ 0.93
PDE6D-201ENST00000287600 HMGB2P26583 209 aaKnown RBP20.88■□□□□ 0.93
PDE6D-201ENST00000287600 SPG7Q9UQ90 795 aa20.88■□□□□ 0.93
PDE6D-201ENST00000287600 MSL1Q68DK7 614 aa20.87■□□□□ 0.93
PDE6D-201ENST00000287600 NLGN2Q8NFZ4 835 aa20.87■□□□□ 0.93
PDE6D-201ENST00000287600 SMARCC1Q92922 1105 aaPredicted RBP20.87■□□□□ 0.93
PDE6D-201ENST00000287600 RNF39Q9H2S5 420 aa20.86■□□□□ 0.93
PDE6D-201ENST00000287600 EYA1Q99502 592 aa20.85■□□□□ 0.93
PDE6D-201ENST00000287600 TNNT2P45379 298 aaPredicted RBP20.84■□□□□ 0.93
PDE6D-201ENST00000287600 FLAD1Q8NFF5 587 aa20.84■□□□□ 0.93
PDE6D-201ENST00000287600 AK7Q96M32 723 aa20.84■□□□□ 0.93
PDE6D-201ENST00000287600 POLKQ9UBT6 870 aa20.84■□□□□ 0.93
PDE6D-201ENST00000287600 PIGBQ92521 554 aa20.83■□□□□ 0.93
PDE6D-201ENST00000287600 UBR3Q6ZT12 1888 aa20.83■□□□□ 0.92
PDE6D-201ENST00000287600 NKX1-1Q15270 411 aaPredicted RBP20.82■□□□□ 0.92
PDE6D-201ENST00000287600 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.81■□□□□ 0.92
PDE6D-201ENST00000287600 TMOD3Q9NYL9 352 aa20.81■□□□□ 0.92
PDE6D-201ENST00000287600 PHF14O94880 888 aa20.8■□□□□ 0.92
PDE6D-201ENST00000287600 EIF4A2Q14240 407 aaKnown RBP20.8■□□□□ 0.92
PDE6D-201ENST00000287600 PHKG2P15735 406 aa20.79■□□□□ 0.92
PDE6D-201ENST00000287600 IFNL2Q8IZJ0 200 aa20.79■□□□□ 0.92
PDE6D-201ENST00000287600 KNSTRNQ9Y448 316 aa20.79■□□□□ 0.92
PDE6D-201ENST00000287600 LOC102724428A0A0B4J2F2 783 aa20.78■□□□□ 0.92
PDE6D-201ENST00000287600 SIK1P57059 783 aa20.78■□□□□ 0.92
PDE6D-201ENST00000287600 PLEKHG2Q9H7P9 1386 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms