RNA–Protein interactions for RNA: ENST00000283882.3

CFDP1-201, Transcript of craniofacial development protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFDP1, Length 1,275 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-201ENST00000283882 HTATSF1O43719 755 aaKnown RBP16.34■□□□□ 0.21
CFDP1-201ENST00000283882 NEUROD2Q15784 382 aa16.34■□□□□ 0.21
CFDP1-201ENST00000283882 CHRNA2Q15822 529 aa16.34■□□□□ 0.21
CFDP1-201ENST00000283882 DUSP27Q5VZP5 1158 aa16.34■□□□□ 0.21
CFDP1-201ENST00000283882 CDCA7LQ96GN5 454 aa16.34■□□□□ 0.21
CFDP1-201ENST00000283882 LRRC37A3O60309 1634 aa16.34■□□□□ 0.21
CFDP1-201ENST00000283882 AMOTQ4VCS5 1084 aa16.32■□□□□ 0.2
CFDP1-201ENST00000283882 MYH16Q9H6N6 1097 aa16.32■□□□□ 0.2
CFDP1-201ENST00000283882 NWD2Q9ULI1 1742 aa16.31■□□□□ 0.2
CFDP1-201ENST00000283882 PLCH1Q4KWH8 1693 aa16.31■□□□□ 0.2
CFDP1-201ENST00000283882 OVOS2A0A0G2JMS6 1433 aa16.31■□□□□ 0.2
CFDP1-201ENST00000283882 USHBP1Q8N6Y0 703 aa16.31■□□□□ 0.2
CFDP1-201ENST00000283882 PKD1L3Q7Z443 1732 aa16.31■□□□□ 0.2
CFDP1-201ENST00000283882 PARP4Q9UKK3 1724 aaKnown RBP16.31■□□□□ 0.2
CFDP1-201ENST00000283882 MAP3K5Q99683 1374 aa16.3■□□□□ 0.2
CFDP1-201ENST00000283882 SPATA31A6Q5VVP1 1343 aa16.3■□□□□ 0.2
CFDP1-201ENST00000283882 FAM83GA6ND36 823 aa16.3■□□□□ 0.2
CFDP1-201ENST00000283882 CSB-PGBD3P0DP91 1061 aa16.3■□□□□ 0.2
CFDP1-201ENST00000283882 MTHFSDQ2M296 383 aaKnown RBP16.3■□□□□ 0.2
CFDP1-201ENST00000283882 CARD10Q9BWT7 1032 aa16.3■□□□□ 0.2
CFDP1-201ENST00000283882 NLRP2Q9NX02 1062 aa16.3■□□□□ 0.2
CFDP1-201ENST00000283882 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.3■□□□□ 0.28e-7■■■□□ 16.4
CFDP1-201ENST00000283882 NRAPQ86VF7 1730 aa16.3■□□□□ 0.2
CFDP1-201ENST00000283882 CRB1P82279 1406 aa16.29■□□□□ 0.2
CFDP1-201ENST00000283882 PLEKHO1Q53GL0 409 aaPredicted RBP16.29■□□□□ 0.2
CFDP1-201ENST00000283882 CT47B1P0C2W7 299 aaPredicted RBP16.28■□□□□ 0.2
CFDP1-201ENST00000283882 IFT57Q9NWB7 429 aa16.28■□□□□ 0.2
CFDP1-201ENST00000283882 MEGF6O75095 1541 aa16.28■□□□□ 0.2
CFDP1-201ENST00000283882 ADAMTS7Q9UKP4 1686 aa16.27■□□□□ 0.2
CFDP1-201ENST00000283882 RNF123Q5XPI4 1314 aa16.27■□□□□ 0.2
CFDP1-201ENST00000283882 GNAI1P63096 354 aa16.27■□□□□ 0.2
CFDP1-201ENST00000283882 RAPGEF4Q8WZA2 1011 aa16.27■□□□□ 0.2
CFDP1-201ENST00000283882 SLIT2O94813 1529 aa16.27■□□□□ 0.2
CFDP1-201ENST00000283882 GNAT3A8MTJ3 354 aa16.26■□□□□ 0.19
CFDP1-201ENST00000283882 ZNF853P0CG23 659 aa16.26■□□□□ 0.19
CFDP1-201ENST00000283882 TATP17735 454 aaPredicted RBP16.26■□□□□ 0.19
CFDP1-201ENST00000283882 RTF1Q92541 710 aaKnown RBP16.26■□□□□ 0.19
CFDP1-201ENST00000283882 FANCIQ9NVI1 1328 aa16.25■□□□□ 0.19
CFDP1-201ENST00000283882 AKAP4Q5JQC9 854 aa16.25■□□□□ 0.19
CFDP1-201ENST00000283882 CHRDL2Q6WN34 429 aa16.25■□□□□ 0.19
CFDP1-201ENST00000283882 CFAP44Q96MT7 982 aa16.25■□□□□ 0.19
CFDP1-201ENST00000283882 BTG4Q9NY30 223 aa16.25■□□□□ 0.19
CFDP1-201ENST00000283882 RCAN3Q9UKA8 241 aa16.25■□□□□ 0.19
CFDP1-201ENST00000283882 CEMIPQ8WUJ3 1361 aa16.25■□□□□ 0.19
CFDP1-201ENST00000283882 TOM1L2Q6ZVM7 507 aa16.24■□□□□ 0.19
CFDP1-201ENST00000283882 BABAM1Q9NWV8 329 aa16.24■□□□□ 0.19
CFDP1-201ENST00000283882 WNK3Q9BYP7 1800 aa16.24■□□□□ 0.19
CFDP1-201ENST00000283882 DISP2A7MBM2 1401 aa16.23■□□□□ 0.19
CFDP1-201ENST00000283882 EVA1CP58658 441 aa16.23■□□□□ 0.19
CFDP1-201ENST00000283882 ZNF530Q6P9A1 599 aaPredicted RBP16.23■□□□□ 0.19
CFDP1-201ENST00000283882 SPG7Q9UQ90 795 aa16.23■□□□□ 0.19
CFDP1-201ENST00000283882 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.22■□□□□ 0.19
CFDP1-201ENST00000283882 LARP1Q6PKG0 1096 aaKnown RBP16.22■□□□□ 0.19
CFDP1-201ENST00000283882 LRP6O75581 1613 aa16.21■□□□□ 0.19
CFDP1-201ENST00000283882 HSPA1LP34931 641 aa16.21■□□□□ 0.19
CFDP1-201ENST00000283882 POLA2Q14181 598 aa16.21■□□□□ 0.19
CFDP1-201ENST00000283882 C1orf141Q5JVX7 400 aa16.21■□□□□ 0.19
CFDP1-201ENST00000283882 CHL1O00533 1208 aa16.2■□□□□ 0.18
CFDP1-201ENST00000283882 ADAMTS2O95450 1211 aa16.2■□□□□ 0.18
CFDP1-201ENST00000283882 NEFLP07196 543 aa16.2■□□□□ 0.18
CFDP1-201ENST00000283882 IL2RBP14784 551 aa16.2■□□□□ 0.18
CFDP1-201ENST00000283882 ZNF428Q96B54 188 aa16.2■□□□□ 0.18
CFDP1-201ENST00000283882 THUMPD2Q9BTF0 503 aaKnown RBP16.2■□□□□ 0.18
CFDP1-201ENST00000283882 STRN4Q9NRL3 753 aa16.2■□□□□ 0.18
CFDP1-201ENST00000283882 SUPT16HQ9Y5B9 1047 aaKnown RBP16.2■□□□□ 0.18
CFDP1-201ENST00000283882 MRC1P22897 1456 aa16.2■□□□□ 0.18
CFDP1-201ENST00000283882 HSP90AB1P08238 724 aaKnown RBP16.19■□□□□ 0.18
CFDP1-201ENST00000283882 DCTN1Q14203 1278 aa16.19■□□□□ 0.18
CFDP1-201ENST00000283882 MCM10Q7L590 875 aa16.19■□□□□ 0.18
CFDP1-201ENST00000283882 THRAP3Q9Y2W1 955 aaKnown RBP16.19■□□□□ 0.18
CFDP1-201ENST00000283882 SHANK3Q9BYB0 1731 aa16.19■□□□□ 0.18
CFDP1-201ENST00000283882 PCDH11XQ9BZA7 1347 aa16.19■□□□□ 0.18
CFDP1-201ENST00000283882 PCDH11YQ9BZA8 1340 aa16.19■□□□□ 0.18
CFDP1-201ENST00000283882 SCN11AQ9UI33 1791 aa16.18■□□□□ 0.18
CFDP1-201ENST00000283882 NUTM2BA6NNL0 878 aaPredicted RBP16.18■□□□□ 0.18
CFDP1-201ENST00000283882 NUTM2EB1AL46 878 aaPredicted RBP16.18■□□□□ 0.18
CFDP1-201ENST00000283882 NUTM2AQ8IVF1 878 aaPredicted RBP16.18■□□□□ 0.18
CFDP1-201ENST00000283882 IFNL2Q8IZJ0 200 aa16.18■□□□□ 0.18
CFDP1-201ENST00000283882 IL17REQ8NFR9 667 aa16.18■□□□□ 0.18
CFDP1-201ENST00000283882 TSR2Q969E8 191 aaKnown RBP16.18■□□□□ 0.18
CFDP1-201ENST00000283882 CDCA7Q9BWT1 371 aaPredicted RBP16.18■□□□□ 0.18
CFDP1-201ENST00000283882 MBIPQ9NS73 344 aa16.18■□□□□ 0.18
CFDP1-201ENST00000283882 SIPA1L3O60292 1781 aaPredicted RBP16.18■□□□□ 0.18
CFDP1-201ENST00000283882 VIRMAQ69YN4 1812 aaKnown RBP16.17■□□□□ 0.18
CFDP1-201ENST00000283882 MYCNP04198 464 aaPredicted RBP16.17■□□□□ 0.18
CFDP1-201ENST00000283882 PHKG2P15735 406 aa16.17■□□□□ 0.18
CFDP1-201ENST00000283882 FNBP4Q8N3X1 1017 aaPredicted RBP16.17■□□□□ 0.18
CFDP1-201ENST00000283882 SOS1Q07889 1333 aaPredicted RBP16.17■□□□□ 0.18
CFDP1-201ENST00000283882 RRP1P56182 461 aaKnown RBP16.16■□□□□ 0.18
CFDP1-201ENST00000283882 EXOSC9Q06265 439 aaKnown RBP16.16■□□□□ 0.18
CFDP1-201ENST00000283882 ERICH6BQ5W0A0 696 aa16.16■□□□□ 0.18
CFDP1-201ENST00000283882 SPATA31A1Q5TZJ5 1347 aa16.16■□□□□ 0.18
CFDP1-201ENST00000283882 KDM3BQ7LBC6 1761 aa16.15■□□□□ 0.18
CFDP1-201ENST00000283882 KDM6AO15550 1401 aaPredicted RBP16.15■□□□□ 0.18
CFDP1-201ENST00000283882 RNMTO43148 476 aaKnown RBP16.15■□□□□ 0.18
CFDP1-201ENST00000283882 TAF7Q15545 349 aaPredicted RBP16.15■□□□□ 0.18
CFDP1-201ENST00000283882 TNS2Q63HR2 1409 aa16.15■□□□□ 0.18
CFDP1-201ENST00000283882 UNC5CLQ8IV45 518 aa16.15■□□□□ 0.18
CFDP1-201ENST00000283882 ZCRB1Q8TBF4 217 aaKnown RBP16.15■□□□□ 0.18
CFDP1-201ENST00000283882 GTF3C3Q9Y5Q9 886 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms