RNA–Protein interactions for RNA: ENST00000280551.10

SEC24D-201, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC24D, Length 4,030 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-201ENST00000280551 AEBP1Q8IUX7 1158 aa13.14□□□□□ -0.31
SEC24D-201ENST00000280551 CENPQQ7L2Z9 268 aaPredicted RBP13.13□□□□□ -0.31
SEC24D-201ENST00000280551 PXDNLA1KZ92 1463 aa13.13□□□□□ -0.31
SEC24D-201ENST00000280551 EXOSC9Q06265 439 aaKnown RBP13.13□□□□□ -0.31
SEC24D-201ENST00000280551 IBTKQ9P2D0 1353 aaPredicted RBP13.12□□□□□ -0.31
SEC24D-201ENST00000280551 ABCC4O15439 1325 aa13.12□□□□□ -0.31
SEC24D-201ENST00000280551 HMOX1P09601 288 aa13.12□□□□□ -0.31
SEC24D-201ENST00000280551 NLRP6P59044 892 aa13.12□□□□□ -0.31
SEC24D-201ENST00000280551 MBIPQ9NS73 344 aa13.12□□□□□ -0.31
SEC24D-201ENST00000280551 C5P01031 1676 aa13.12□□□□□ -0.31
SEC24D-201ENST00000280551 KIF16BQ96L93 1317 aa13.12□□□□□ -0.31
SEC24D-201ENST00000280551 SULT6B1Q6IMI4 303 aa13.11□□□□□ -0.31
SEC24D-201ENST00000280551 ORAI2Q96SN7 254 aa13.11□□□□□ -0.31
SEC24D-201ENST00000280551 COL16A1Q07092 1604 aaPredicted RBP13.11□□□□□ -0.31
SEC24D-201ENST00000280551 ABTB2Q8N961 1025 aa13.11□□□□□ -0.31
SEC24D-201ENST00000280551 TSR2Q969E8 191 aaKnown RBP13.11□□□□□ -0.31
SEC24D-201ENST00000280551 CICQ96RK0 1608 aaPredicted RBP13.11□□□□□ -0.31
SEC24D-201ENST00000280551 RLBP1P12271 317 aa13.1□□□□□ -0.31
SEC24D-201ENST00000280551 PROSER2Q86WR7 435 aaPredicted RBP13.1□□□□□ -0.31
SEC24D-201ENST00000280551 MRPL50Q8N5N7 158 aaKnown RBP13.1□□□□□ -0.31
SEC24D-201ENST00000280551 SSH1Q8WYL5 1049 aa13.1□□□□□ -0.31
SEC24D-201ENST00000280551 HEG1Q9ULI3 1381 aa13.1□□□□□ -0.31
SEC24D-201ENST00000280551 NRAPQ86VF7 1730 aa13.1□□□□□ -0.31
SEC24D-201ENST00000280551 SOS2Q07890 1332 aaPredicted RBP13.1□□□□□ -0.31
SEC24D-201ENST00000280551 MAP3K5Q99683 1374 aa13.1□□□□□ -0.31
SEC24D-201ENST00000280551 NUTM2FA1L443 756 aa13.1□□□□□ -0.31
SEC24D-201ENST00000280551 CADPS2Q86UW7 1296 aa13.1□□□□□ -0.31
SEC24D-201ENST00000280551 COL14A1Q05707 1796 aaKnown RBP13.09□□□□□ -0.31
SEC24D-201ENST00000280551 TCERG1O14776 1098 aaKnown RBP13.09□□□□□ -0.31
SEC24D-201ENST00000280551 MVPQ14764 893 aaKnown RBP13.09□□□□□ -0.31
SEC24D-201ENST00000280551 MTHFSDQ2M296 383 aaKnown RBP13.09□□□□□ -0.31
SEC24D-201ENST00000280551 ESCO1Q5FWF5 840 aa13.09□□□□□ -0.31
SEC24D-201ENST00000280551 SPATA31A3Q5VYP0 1347 aa13.09□□□□□ -0.31
SEC24D-201ENST00000280551 GAS2L2Q8NHY3 880 aa13.09□□□□□ -0.31
SEC24D-201ENST00000280551 ROBO1Q9Y6N7 1651 aa13.08□□□□□ -0.32
SEC24D-201ENST00000280551 ZKSCAN2Q63HK3 967 aa13.08□□□□□ -0.32
SEC24D-201ENST00000280551 CLUAP1Q96AJ1 413 aa13.08□□□□□ -0.32
SEC24D-201ENST00000280551 NEUROD2Q15784 382 aa13.08□□□□□ -0.32
SEC24D-201ENST00000280551 ATF7IPQ6VMQ6 1270 aa13.08□□□□□ -0.32
SEC24D-201ENST00000280551 TRIM27P14373 513 aa13.08□□□□□ -0.32
SEC24D-201ENST00000280551 LRP6O75581 1613 aa13.07□□□□□ -0.32
SEC24D-201ENST00000280551 GCP02774 474 aa13.07□□□□□ -0.32
SEC24D-201ENST00000280551 NPHP3Q7Z494 1330 aa13.07□□□□□ -0.32
SEC24D-201ENST00000280551 KRT28Q7Z3Y7 464 aa13.07□□□□□ -0.32
SEC24D-201ENST00000280551 TOGARAM1Q9Y4F4 1720 aa13.06□□□□□ -0.32
SEC24D-201ENST00000280551 NEFMP07197 916 aa13.06□□□□□ -0.32
SEC24D-201ENST00000280551 HDAC1Q13547 482 aaPredicted RBP13.06□□□□□ -0.32
SEC24D-201ENST00000280551 PSME1Q06323 249 aa13.06□□□□□ -0.32
SEC24D-201ENST00000280551 PPM1GO15355 546 aaPredicted RBP13.05□□□□□ -0.32
SEC24D-201ENST00000280551 NWD2Q9ULI1 1742 aa13.05□□□□□ -0.32
SEC24D-201ENST00000280551 AMPHP49418 695 aa13.04□□□□□ -0.32
SEC24D-201ENST00000280551 ZBTB40Q9NUA8 1239 aa13.04□□□□□ -0.32
SEC24D-201ENST00000280551 DZIP1LQ8IYY4 767 aaKnown RBP13.04□□□□□ -0.32
SEC24D-201ENST00000280551 ERBB3P21860 1342 aa13.04□□□□□ -0.32
SEC24D-201ENST00000280551 TSPYL6Q8N831 410 aa13.04□□□□□ -0.32
SEC24D-201ENST00000280551 FAM83GA6ND36 823 aa13.04□□□□□ -0.32
SEC24D-201ENST00000280551 C8orf58Q8NAV2 365 aa13.04□□□□□ -0.32
SEC24D-201ENST00000280551 PANK1Q8TE04 598 aa13.04□□□□□ -0.32
SEC24D-201ENST00000280551 NUP188Q5SRE5 1749 aa13.03□□□□□ -0.32
SEC24D-201ENST00000280551 NBPF6Q5VWK0 638 aa13.03□□□□□ -0.32
SEC24D-201ENST00000280551 NBPF4Q96M43 638 aa13.03□□□□□ -0.32
SEC24D-201ENST00000280551 TNNQ9UQP3 1299 aa13.03□□□□□ -0.32
SEC24D-201ENST00000280551 HAP1P54257 671 aaPredicted RBP13.03□□□□□ -0.32
SEC24D-201ENST00000280551 BRINP3Q76B58 766 aa13.03□□□□□ -0.32
SEC24D-201ENST00000280551 IGHDP01880 384 aa13.02□□□□□ -0.32
SEC24D-201ENST00000280551 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.02□□□□□ -0.328e-7■■□□□ 14.5
SEC24D-201ENST00000280551 PTPRCP08575 1304 aa13.02□□□□□ -0.32
SEC24D-201ENST00000280551 COL5A2P05997 1499 aaPredicted RBP13.02□□□□□ -0.33
SEC24D-201ENST00000280551 NOB1Q9ULX3 412 aaKnown RBP13.02□□□□□ -0.33
SEC24D-201ENST00000280551 DDX19BQ9UMR2 479 aa13.02□□□□□ -0.33
SEC24D-201ENST00000280551 ATP10DQ9P241 1426 aa13.02□□□□□ -0.33
SEC24D-201ENST00000280551 MEGF6O75095 1541 aa13.02□□□□□ -0.33
SEC24D-201ENST00000280551 GNAT3A8MTJ3 354 aa13.02□□□□□ -0.33
SEC24D-201ENST00000280551 IPO8O15397 1037 aaKnown RBP13.02□□□□□ -0.33
SEC24D-201ENST00000280551 RBM33Q96EV2 1170 aaKnown RBP13.02□□□□□ -0.33
SEC24D-201ENST00000280551 THUMPD2Q9BTF0 503 aaKnown RBP13.02□□□□□ -0.33
SEC24D-201ENST00000280551 HOXB7P09629 217 aa13.01□□□□□ -0.33
SEC24D-201ENST00000280551 ATF3P18847 181 aa13.01□□□□□ -0.33
SEC24D-201ENST00000280551 INTS3Q68E01 1043 aaKnown RBP13.01□□□□□ -0.33
SEC24D-201ENST00000280551 PCDHB15Q9Y5E8 787 aa13.01□□□□□ -0.33
SEC24D-201ENST00000280551 TWISTNBQ3B726 338 aaPredicted RBP13.01□□□□□ -0.33
SEC24D-201ENST00000280551 FOXO3O43524 673 aa13.01□□□□□ -0.33
SEC24D-201ENST00000280551 IL17REQ8NFR9 667 aa13.01□□□□□ -0.33
SEC24D-201ENST00000280551 SMC4Q9NTJ3 1288 aa13.01□□□□□ -0.33
SEC24D-201ENST00000280551 ZNF831Q5JPB2 1677 aa13.01□□□□□ -0.33
SEC24D-201ENST00000280551 ZBTB7BO15156 539 aaPredicted RBP13□□□□□ -0.33
SEC24D-201ENST00000280551 AMOTQ4VCS5 1084 aa13□□□□□ -0.33
SEC24D-201ENST00000280551 BACH2Q9BYV9 841 aa13□□□□□ -0.33
SEC24D-201ENST00000280551 AXIN2Q9Y2T1 843 aa13□□□□□ -0.33
SEC24D-201ENST00000280551 KDM6AO15550 1401 aaPredicted RBP13□□□□□ -0.33
SEC24D-201ENST00000280551 RREB1Q92766 1687 aa12.99□□□□□ -0.33
SEC24D-201ENST00000280551 COG6Q9Y2V7 657 aa12.99□□□□□ -0.33
SEC24D-201ENST00000280551 HSPA2P54652 639 aa12.99□□□□□ -0.33
SEC24D-201ENST00000280551 ITGB4P16144 1822 aa12.99□□□□□ -0.33
SEC24D-201ENST00000280551 PHLPP1O60346 1717 aa12.99□□□□□ -0.33
SEC24D-201ENST00000280551 AKAP4Q5JQC9 854 aa12.99□□□□□ -0.33
SEC24D-201ENST00000280551 SMC5Q8IY18 1101 aa12.99□□□□□ -0.33
SEC24D-201ENST00000280551 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.99□□□□□ -0.33
SEC24D-201ENST00000280551 ARFGEF2Q9Y6D5 1785 aa12.98□□□□□ -0.33
SEC24D-201ENST00000280551 DCTN1Q14203 1278 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms