RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 ZC3H6P61129 1189 aaKnown RBP28.4■■■□□ 2.14
CCDC7-201ENST00000277657 RTF1Q92541 710 aaKnown RBP28.4■■■□□ 2.14
CCDC7-201ENST00000277657 LRRC37A3O60309 1634 aa28.39■■■□□ 2.14
CCDC7-201ENST00000277657 VAMP4O75379 141 aa28.39■■■□□ 2.14
CCDC7-201ENST00000277657 LRRC59Q96AG4 307 aaKnown RBP28.39■■■□□ 2.14
CCDC7-201ENST00000277657 PANK1Q8TE04 598 aa28.38■■■□□ 2.13
CCDC7-201ENST00000277657 BRPF1P55201 1214 aaPredicted RBP28.38■■■□□ 2.13
CCDC7-201ENST00000277657 ZKSCAN2Q63HK3 967 aa28.37■■■□□ 2.13
CCDC7-201ENST00000277657 NHSL1Q5SYE7 1610 aa28.36■■■□□ 2.13
CCDC7-201ENST00000277657 GNAT3A8MTJ3 354 aa28.36■■■□□ 2.13
CCDC7-201ENST00000277657 TSPYL6Q8N831 410 aa28.36■■■□□ 2.13
CCDC7-201ENST00000277657 CABLES1Q8TDN4 633 aa28.36■■■□□ 2.13
CCDC7-201ENST00000277657 MAP3K5Q99683 1374 aa28.36■■■□□ 2.13
CCDC7-201ENST00000277657 LMO7Q8WWI1 1683 aa28.36■■■□□ 2.13
CCDC7-201ENST00000277657 ERBB3P21860 1342 aa28.36■■■□□ 2.13
CCDC7-201ENST00000277657 CPDO75976 1380 aa28.36■■■□□ 2.13
CCDC7-201ENST00000277657 RLBP1P12271 317 aa28.34■■■□□ 2.13
CCDC7-201ENST00000277657 C8orf58Q8NAV2 365 aa28.34■■■□□ 2.13
CCDC7-201ENST00000277657 TWISTNBQ3B726 338 aaPredicted RBP28.34■■■□□ 2.13
CCDC7-201ENST00000277657 TNNQ9UQP3 1299 aa28.34■■■□□ 2.13
CCDC7-201ENST00000277657 KIF16BQ96L93 1317 aa28.33■■■□□ 2.13
CCDC7-201ENST00000277657 COG6Q9Y2V7 657 aa28.33■■■□□ 2.13
CCDC7-201ENST00000277657 KIAA0232Q92628 1395 aa28.32■■■□□ 2.12
CCDC7-201ENST00000277657 MS4A1P11836 297 aa28.32■■■□□ 2.12
CCDC7-201ENST00000277657 TSHZ2Q9NRE2 1034 aa28.32■■■□□ 2.12
CCDC7-201ENST00000277657 NOB1Q9ULX3 412 aaKnown RBP28.3■■■□□ 2.12
CCDC7-201ENST00000277657 TRIM27P14373 513 aa28.29■■■□□ 2.12
CCDC7-201ENST00000277657 AAMPQ13685 434 aa28.29■■■□□ 2.12
CCDC7-201ENST00000277657 ATF7IPQ6VMQ6 1270 aa28.29■■■□□ 2.12
CCDC7-201ENST00000277657 DZIP1LQ8IYY4 767 aaKnown RBP28.29■■■□□ 2.12
CCDC7-201ENST00000277657 LTBP4Q8N2S1 1624 aa28.29■■■□□ 2.12
CCDC7-201ENST00000277657 IL17REQ8NFR9 667 aa28.29■■■□□ 2.12
CCDC7-201ENST00000277657 IPO8O15397 1037 aaKnown RBP28.28■■■□□ 2.12
CCDC7-201ENST00000277657 FAM208AQ9UK61 1670 aaKnown RBP28.28■■■□□ 2.12
CCDC7-201ENST00000277657 ELL2O00472 640 aaPredicted RBP28.27■■■□□ 2.12
CCDC7-201ENST00000277657 AMOTQ4VCS5 1084 aa28.27■■■□□ 2.12
CCDC7-201ENST00000277657 MRPL50Q8N5N7 158 aaKnown RBP28.27■■■□□ 2.12
CCDC7-201ENST00000277657 CLUAP1Q96AJ1 413 aa28.27■■■□□ 2.12
CCDC7-201ENST00000277657 KDM2BQ8NHM5 1336 aa28.27■■■□□ 2.12
CCDC7-201ENST00000277657 PLEKHO1Q53GL0 409 aaPredicted RBP28.27■■■□□ 2.12
CCDC7-201ENST00000277657 CEMIPQ8WUJ3 1361 aa28.26■■■□□ 2.11
CCDC7-201ENST00000277657 ABCA3Q99758 1704 aa28.26■■■□□ 2.11
CCDC7-201ENST00000277657 HAP1P54257 671 aaPredicted RBP28.25■■■□□ 2.11
CCDC7-201ENST00000277657 FTSJ3Q8IY81 847 aaKnown RBP28.25■■■□□ 2.11
CCDC7-201ENST00000277657 MVPQ14764 893 aaKnown RBP28.25■■■□□ 2.11
CCDC7-201ENST00000277657 BABAM1Q9NWV8 329 aa28.25■■■□□ 2.11
CCDC7-201ENST00000277657 TSPYL4Q9UJ04 414 aa28.25■■■□□ 2.11
CCDC7-201ENST00000277657 CHRNA2Q15822 529 aa28.23■■■□□ 2.11
CCDC7-201ENST00000277657 ARHGAP45Q92619 1136 aa28.23■■■□□ 2.11
CCDC7-201ENST00000277657 AKAP4Q5JQC9 854 aa28.23■■■□□ 2.11
CCDC7-201ENST00000277657 MIS18AQ9NYP9 233 aa28.23■■■□□ 2.11
CCDC7-201ENST00000277657 KRT24Q2M2I5 525 aa28.22■■■□□ 2.11
CCDC7-201ENST00000277657 CENPQQ7L2Z9 268 aaPredicted RBP28.22■■■□□ 2.11
CCDC7-201ENST00000277657 ZNF530Q6P9A1 599 aaPredicted RBP28.21■■■□□ 2.11
CCDC7-201ENST00000277657 TAF7Q15545 349 aaPredicted RBP28.2■■■□□ 2.1
CCDC7-201ENST00000277657 PLEKHG2Q9H7P9 1386 aa28.2■■■□□ 2.1
CCDC7-201ENST00000277657 NLRP2Q9NX02 1062 aa28.19■■■□□ 2.1
CCDC7-201ENST00000277657 OVOS2A0A0G2JMS6 1433 aa28.18■■■□□ 2.1
CCDC7-201ENST00000277657 ROBO1Q9Y6N7 1651 aa28.17■■■□□ 2.1
CCDC7-201ENST00000277657 LGR6Q9HBX8 967 aa28.16■■■□□ 2.1
CCDC7-201ENST00000277657 PRDM11Q9NQV5 511 aa28.16■■■□□ 2.1
CCDC7-201ENST00000277657 DDX19BQ9UMR2 479 aa28.16■■■□□ 2.1
CCDC7-201ENST00000277657 AHDC1Q5TGY3 1603 aaPredicted RBP28.15■■■□□ 2.1
CCDC7-201ENST00000277657 CSB-PGBD3P0DP91 1061 aa28.15■■■□□ 2.1
CCDC7-201ENST00000277657 TMEM57Q8N5G2 664 aa28.15■■■□□ 2.1
CCDC7-201ENST00000277657 TCERG1O14776 1098 aaKnown RBP28.15■■■□□ 2.1
CCDC7-201ENST00000277657 C1orf141Q5JVX7 400 aa28.15■■■□□ 2.1
CCDC7-201ENST00000277657 RAPGEF4Q8WZA2 1011 aa28.15■■■□□ 2.1
CCDC7-201ENST00000277657 ADAMTS7Q9UKP4 1686 aa28.14■■■□□ 2.1
CCDC7-201ENST00000277657 VIRMAQ69YN4 1812 aaKnown RBP28.14■■■□□ 2.1
CCDC7-201ENST00000277657 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.13■■■□□ 2.09
CCDC7-201ENST00000277657 SOS1Q07889 1333 aaPredicted RBP28.13■■■□□ 2.09
CCDC7-201ENST00000277657 MEGF6O75095 1541 aa28.12■■■□□ 2.09
CCDC7-201ENST00000277657 ITPRIPQ8IWB1 547 aa28.12■■■□□ 2.09
CCDC7-201ENST00000277657 ABCC4O15439 1325 aa28.12■■■□□ 2.09
CCDC7-201ENST00000277657 RNMTO43148 476 aaKnown RBP28.11■■■□□ 2.09
CCDC7-201ENST00000277657 TATP17735 454 aaPredicted RBP28.11■■■□□ 2.09
CCDC7-201ENST00000277657 PCDHB15Q9Y5E8 787 aa28.11■■■□□ 2.09
CCDC7-201ENST00000277657 KDM3BQ7LBC6 1761 aa28.11■■■□□ 2.09
CCDC7-201ENST00000277657 API5Q9BZZ5 524 aaKnown RBP28.1■■■□□ 2.09
CCDC7-201ENST00000277657 COL5A2P05997 1499 aaPredicted RBP28.1■■■□□ 2.09
CCDC7-201ENST00000277657 IGHDP01880 384 aa28.1■■■□□ 2.09
CCDC7-201ENST00000277657 MPRIPQ6WCQ1 1025 aa28.1■■■□□ 2.09
CCDC7-201ENST00000277657 WDR17Q8IZU2 1322 aa28.1■■■□□ 2.09
CCDC7-201ENST00000277657 PKD1L3Q7Z443 1732 aa28.08■■■□□ 2.09
CCDC7-201ENST00000277657 TEFQ10587 303 aa28.07■■■□□ 2.08
CCDC7-201ENST00000277657 SPG7Q9UQ90 795 aa28.07■■■□□ 2.08
CCDC7-201ENST00000277657 ZBTB40Q9NUA8 1239 aa28.06■■■□□ 2.08
CCDC7-201ENST00000277657 SIPA1L3O60292 1781 aaPredicted RBP28.06■■■□□ 2.08
CCDC7-201ENST00000277657 COL22A1Q8NFW1 1626 aaPredicted RBP28.05■■■□□ 2.08
CCDC7-201ENST00000277657 PTPRCP08575 1304 aa28.05■■■□□ 2.08
CCDC7-201ENST00000277657 RGS12O14924 1447 aa28.05■■■□□ 2.08
CCDC7-201ENST00000277657 SLC4A2P04920 1241 aa28.03■■■□□ 2.08
CCDC7-201ENST00000277657 SCN11AQ9UI33 1791 aa28.03■■■□□ 2.08
CCDC7-201ENST00000277657 PHKG2P15735 406 aa28.02■■■□□ 2.08
CCDC7-201ENST00000277657 EIF4A1P60842 406 aaKnown RBP28.02■■■□□ 2.08
CCDC7-201ENST00000277657 CACNA1FO60840 1977 aa28.02■■■□□ 2.08
CCDC7-201ENST00000277657 BTBD11A6QL63 1104 aa28.02■■■□□ 2.08
CCDC7-201ENST00000277657 PARP4Q9UKK3 1724 aaKnown RBP28.01■■■□□ 2.07
CCDC7-201ENST00000277657 ZBTB7BO15156 539 aaPredicted RBP28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms