RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 PRPF40AO75400 957 aaKnown RBP13.45□□□□□ -0.26
USP6NL-201ENST00000277575 DBF4Q9UBU7 674 aaPredicted RBP13.45□□□□□ -0.26
USP6NL-201ENST00000277575 KINO60870 393 aaKnown RBP13.44□□□□□ -0.26
USP6NL-201ENST00000277575 STK3Q13188 491 aa13.44□□□□□ -0.26
USP6NL-201ENST00000277575 CAVIN1Q6NZI2 390 aaKnown RBP13.44□□□□□ -0.26
USP6NL-201ENST00000277575 ZNF592Q92610 1267 aa13.44□□□□□ -0.26
USP6NL-201ENST00000277575 K7ELQ4 463 aaPredicted RBP13.44□□□□□ -0.26
USP6NL-201ENST00000277575 DNAAF4Q8WXU2 420 aa13.44□□□□□ -0.26
USP6NL-201ENST00000277575 TRAPPC8Q9Y2L5 1435 aa13.44□□□□□ -0.26
USP6NL-201ENST00000277575 IGHMBP2P38935 993 aaKnown RBP13.43□□□□□ -0.26
USP6NL-201ENST00000277575 STK11IPQ8N1F8 1099 aa13.43□□□□□ -0.26
USP6NL-201ENST00000277575 GOLGA6L1Q8N7Z2 621 aa13.43□□□□□ -0.26
USP6NL-201ENST00000277575 CWC22Q9HCG8 908 aaKnown RBP13.43□□□□□ -0.26
USP6NL-201ENST00000277575 UHRF1BP1LA0JNW5 1464 aa13.43□□□□□ -0.26
USP6NL-201ENST00000277575 GLRX3O76003 335 aaKnown RBP13.43□□□□□ -0.26
USP6NL-201ENST00000277575 MYD88Q99836 296 aa13.43□□□□□ -0.26
USP6NL-201ENST00000277575 A0A0U1RQG5 324 aaPredicted RBP13.43□□□□□ -0.26
USP6NL-201ENST00000277575 TRIM27P14373 513 aa13.43□□□□□ -0.26
USP6NL-201ENST00000277575 IDH1O75874 414 aaKnown RBP13.43□□□□□ -0.26
USP6NL-201ENST00000277575 STK38Q15208 465 aa13.43□□□□□ -0.26
USP6NL-201ENST00000277575 HOMER1Q86YM7 354 aa13.43□□□□□ -0.26
USP6NL-201ENST00000277575 CTNNA3Q9UI47 895 aa13.43□□□□□ -0.26
USP6NL-201ENST00000277575 SYCP2Q9BX26 1530 aa13.43□□□□□ -0.26
USP6NL-201ENST00000277575 DUOX2Q9NRD8 1548 aa13.43□□□□□ -0.26
USP6NL-201ENST00000277575 MX1P20591 662 aa13.42□□□□□ -0.26
USP6NL-201ENST00000277575 METTL24Q5JXM2 366 aa13.42□□□□□ -0.26
USP6NL-201ENST00000277575 TRIM22Q8IYM9 498 aa13.42□□□□□ -0.26
USP6NL-201ENST00000277575 NAT10Q9H0A0 1025 aaKnown RBP13.42□□□□□ -0.26
USP6NL-201ENST00000277575 CEBPZQ03701 1054 aaKnown RBP13.42□□□□□ -0.26
USP6NL-201ENST00000277575 FLIIQ13045 1269 aa13.42□□□□□ -0.26
USP6NL-201ENST00000277575 ZNF518AQ6AHZ1 1483 aa13.42□□□□□ -0.26
USP6NL-201ENST00000277575 ANKRD36BQ8N2N9 1353 aa13.42□□□□□ -0.26
USP6NL-201ENST00000277575 MRE11P49959 708 aa13.42□□□□□ -0.26
USP6NL-201ENST00000277575 HSP90AB2PQ58FF8 381 aa13.42□□□□□ -0.26
USP6NL-201ENST00000277575 OLFM4Q6UX06 510 aa13.42□□□□□ -0.26
USP6NL-201ENST00000277575 JAKMIP1Q96N16 626 aaKnown RBP13.42□□□□□ -0.26
USP6NL-201ENST00000277575 FMNL2Q96PY5 1086 aa13.42□□□□□ -0.26
USP6NL-201ENST00000277575 LRP2BPQ9P2M1 347 aa13.42□□□□□ -0.26
USP6NL-201ENST00000277575 LRPPRCP42704 1394 aaKnown RBP13.42□□□□□ -0.26
USP6NL-201ENST00000277575 FAM83GA6ND36 823 aa13.42□□□□□ -0.26
USP6NL-201ENST00000277575 SMARCA5O60264 1052 aaPredicted RBP13.42□□□□□ -0.26
USP6NL-201ENST00000277575 ATP2B2Q01814 1243 aa13.42□□□□□ -0.26
USP6NL-201ENST00000277575 ZNF652Q9Y2D9 606 aa13.42□□□□□ -0.26
USP6NL-201ENST00000277575 WDR7Q9Y4E6 1490 aa13.41□□□□□ -0.26
USP6NL-201ENST00000277575 RAB11FIP3O75154 756 aa13.41□□□□□ -0.26
USP6NL-201ENST00000277575 ZNF396Q96N95 335 aaPredicted RBP13.41□□□□□ -0.26
USP6NL-201ENST00000277575 RAI14Q9P0K7 980 aa13.41□□□□□ -0.26
USP6NL-201ENST00000277575 EXOC5O00471 708 aa13.41□□□□□ -0.26
USP6NL-201ENST00000277575 IFNL2Q8IZJ0 200 aa13.41□□□□□ -0.26
USP6NL-201ENST00000277575 HYPKQ9NX55 129 aa13.41□□□□□ -0.26
USP6NL-201ENST00000277575 TDO2P48775 406 aa13.41□□□□□ -0.26
USP6NL-201ENST00000277575 NASPP49321 788 aaPredicted RBP13.41□□□□□ -0.26
USP6NL-201ENST00000277575 CHRNA2Q15822 529 aa13.41□□□□□ -0.26
USP6NL-201ENST00000277575 LARP1BQ659C4 914 aaKnown RBP13.41□□□□□ -0.26
USP6NL-201ENST00000277575 NGLY1Q96IV0 654 aa13.41□□□□□ -0.26
USP6NL-201ENST00000277575 ABCF2Q9UG63 623 aa13.41□□□□□ -0.26
USP6NL-201ENST00000277575 WDR33Q9C0J8 1336 aaKnown RBP13.4□□□□□ -0.26
USP6NL-201ENST00000277575 KRT32Q14532 448 aa13.4□□□□□ -0.26
USP6NL-201ENST00000277575 ANO8Q9HCE9 1232 aaPredicted RBP13.4□□□□□ -0.26
USP6NL-201ENST00000277575 LRRFIP2Q9Y608 721 aaKnown RBP13.4□□□□□ -0.26
USP6NL-201ENST00000277575 TEX14Q8IWB6 1497 aa13.4□□□□□ -0.26
USP6NL-201ENST00000277575 AEBP1Q8IUX7 1158 aa13.4□□□□□ -0.26
USP6NL-201ENST00000277575 SPINK5Q9NQ38 1064 aaPredicted RBP13.4□□□□□ -0.26
USP6NL-201ENST00000277575 DMRT2Q9Y5R5 561 aa13.4□□□□□ -0.26
USP6NL-201ENST00000277575 JMYQ8N9B5 988 aa13.4□□□□□ -0.27
USP6NL-201ENST00000277575 ANKRD24Q8TF21 1146 aa13.4□□□□□ -0.27
USP6NL-201ENST00000277575 NUP133Q8WUM0 1156 aa13.39□□□□□ -0.27
USP6NL-201ENST00000277575 BOLA2Q9H3K6 86 aa13.39□□□□□ -0.27
USP6NL-201ENST00000277575 AKAP2Q9Y2D5 859 aa13.39□□□□□ -0.27
USP6NL-201ENST00000277575 A0A087WZG4 1122 aa13.39□□□□□ -0.27
USP6NL-201ENST00000277575 MBIPQ9NS73 344 aa13.39□□□□□ -0.27
USP6NL-201ENST00000277575 PDRG1Q9NUG6 133 aa13.39□□□□□ -0.27
USP6NL-201ENST00000277575 CCDC69A6NI79 296 aa13.38□□□□□ -0.27
USP6NL-201ENST00000277575 PTPRCP08575 1304 aa13.38□□□□□ -0.27
USP6NL-201ENST00000277575 KIF21AQ7Z4S6 1674 aa13.38□□□□□ -0.27
USP6NL-201ENST00000277575 HMGB2P26583 209 aaKnown RBP13.38□□□□□ -0.27
USP6NL-201ENST00000277575 TXLNAP40222 546 aa13.38□□□□□ -0.27
USP6NL-201ENST00000277575 KRT85P78386 507 aa13.38□□□□□ -0.27
USP6NL-201ENST00000277575 IFIT5Q13325 482 aaKnown RBP13.38□□□□□ -0.27
USP6NL-201ENST00000277575 SKAP1Q86WV1 359 aa13.38□□□□□ -0.27
USP6NL-201ENST00000277575 UBAC1Q9BSL1 405 aa13.38□□□□□ -0.27
USP6NL-201ENST00000277575 TTC21AQ8NDW8 1320 aa13.38□□□□□ -0.27
USP6NL-201ENST00000277575 ZPR1O75312 459 aa13.38□□□□□ -0.27
USP6NL-201ENST00000277575 LETM1O95202 739 aaPredicted RBP13.38□□□□□ -0.27
USP6NL-201ENST00000277575 IFIT1P09914 478 aaKnown RBP13.38□□□□□ -0.27
USP6NL-201ENST00000277575 CCDC70Q6NSX1 233 aa13.38□□□□□ -0.27
USP6NL-201ENST00000277575 ZSCAN31Q96LW9 406 aaPredicted RBP13.38□□□□□ -0.27
USP6NL-201ENST00000277575 ZBTB3Q9H5J0 574 aa13.38□□□□□ -0.27
USP6NL-201ENST00000277575 TRMT112Q9UI30 125 aaKnown RBP13.38□□□□□ -0.27
USP6NL-201ENST00000277575 PRAG1Q86YV5 1406 aa13.37□□□□□ -0.27
USP6NL-201ENST00000277575 HSP90AB3PQ58FF7 597 aa13.37□□□□□ -0.27
USP6NL-201ENST00000277575 AIDAQ96BJ3 306 aa13.37□□□□□ -0.27
USP6NL-201ENST00000277575 IL16Q14005 1332 aa13.37□□□□□ -0.27
USP6NL-201ENST00000277575 RBM5P52756 815 aaKnown RBP eCLIP13.37□□□□□ -0.27
USP6NL-201ENST00000277575 UPF3BQ9BZI7 483 aaKnown RBP13.37□□□□□ -0.27
USP6NL-201ENST00000277575 TRIM5Q9C035 493 aa13.37□□□□□ -0.27
USP6NL-201ENST00000277575 RALGAPBQ86X10 1494 aa13.37□□□□□ -0.27
USP6NL-201ENST00000277575 CCDC8Q9H0W5 538 aaPredicted RBP13.37□□□□□ -0.27
USP6NL-201ENST00000277575 PI4KAP2A4QPH2 592 aa13.36□□□□□ -0.27
USP6NL-201ENST00000277575 ME1P48163 572 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms