RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 EXOC6Q8TAG9 804 aa18.79■□□□□ 0.6
TRIM23-202ENST00000274327 LAS1LQ9Y4W2 734 aaKnown RBP18.79■□□□□ 0.6
TRIM23-202ENST00000274327 COL22A1Q8NFW1 1626 aaPredicted RBP18.77■□□□□ 0.6
TRIM23-202ENST00000274327 MAP3K5Q99683 1374 aa18.77■□□□□ 0.6
TRIM23-202ENST00000274327 CHRNA2Q15822 529 aa18.77■□□□□ 0.6
TRIM23-202ENST00000274327 C20orf194Q5TEA3 1177 aa18.77■□□□□ 0.6
TRIM23-202ENST00000274327 GNAT3A8MTJ3 354 aa18.77■□□□□ 0.59
TRIM23-202ENST00000274327 CHL1O00533 1208 aa18.77■□□□□ 0.59
TRIM23-202ENST00000274327 RTF1Q92541 710 aaKnown RBP18.77■□□□□ 0.59
TRIM23-202ENST00000274327 CRBNQ96SW2 442 aa18.76■□□□□ 0.59
TRIM23-202ENST00000274327 TSHZ2Q9NRE2 1034 aa18.76■□□□□ 0.59
TRIM23-202ENST00000274327 ZNF428Q96B54 188 aa18.75■□□□□ 0.59
TRIM23-202ENST00000274327 AMOTQ4VCS5 1084 aa18.74■□□□□ 0.59
TRIM23-202ENST00000274327 PLEKHO1Q53GL0 409 aaPredicted RBP18.74■□□□□ 0.59
TRIM23-202ENST00000274327 PLEKHG2Q9H7P9 1386 aa18.74■□□□□ 0.59
TRIM23-202ENST00000274327 VIRMAQ69YN4 1812 aaKnown RBP18.73■□□□□ 0.59
TRIM23-202ENST00000274327 VAMP4O75379 141 aa18.73■□□□□ 0.59
TRIM23-202ENST00000274327 PDE3AQ14432 1141 aa18.73■□□□□ 0.59
TRIM23-202ENST00000274327 PRDM11Q9NQV5 511 aa18.73■□□□□ 0.59
TRIM23-202ENST00000274327 COL16A1Q07092 1604 aaPredicted RBP18.73■□□□□ 0.59
TRIM23-202ENST00000274327 PHLPP1O60346 1717 aa18.72■□□□□ 0.59
TRIM23-202ENST00000274327 ALDH1L2Q3SY69 923 aa18.72■□□□□ 0.59
TRIM23-202ENST00000274327 B4GALNT3Q6L9W6 998 aa18.72■□□□□ 0.59
TRIM23-202ENST00000274327 IL17REQ8NFR9 667 aa18.72■□□□□ 0.59
TRIM23-202ENST00000274327 SSH1Q8WYL5 1049 aa18.72■□□□□ 0.59
TRIM23-202ENST00000274327 BCL2L13Q9BXK5 485 aa18.72■□□□□ 0.59
TRIM23-202ENST00000274327 CEMIPQ8WUJ3 1361 aa18.72■□□□□ 0.59
TRIM23-202ENST00000274327 HAP1P54257 671 aaPredicted RBP18.71■□□□□ 0.59
TRIM23-202ENST00000274327 AKAP4Q5JQC9 854 aa18.71■□□□□ 0.59
TRIM23-202ENST00000274327 TSPYL6Q8N831 410 aa18.71■□□□□ 0.59
TRIM23-202ENST00000274327 NLRP2Q9NX02 1062 aa18.71■□□□□ 0.59
TRIM23-202ENST00000274327 COL5A2P05997 1499 aaPredicted RBP18.71■□□□□ 0.59
TRIM23-202ENST00000274327 CSB-PGBD3P0DP91 1061 aa18.7■□□□□ 0.58
TRIM23-202ENST00000274327 BRPF1P55201 1214 aaPredicted RBP18.7■□□□□ 0.58
TRIM23-202ENST00000274327 C8orf58Q8NAV2 365 aa18.7■□□□□ 0.58
TRIM23-202ENST00000274327 ADAMTS7Q9UKP4 1686 aa18.7■□□□□ 0.58
TRIM23-202ENST00000274327 SMC4Q9NTJ3 1288 aa18.7■□□□□ 0.58
TRIM23-202ENST00000274327 BABAM1Q9NWV8 329 aa18.7■□□□□ 0.58
TRIM23-202ENST00000274327 WDR17Q8IZU2 1322 aa18.69■□□□□ 0.58
TRIM23-202ENST00000274327 TOM1O60784 492 aa18.69■□□□□ 0.58
TRIM23-202ENST00000274327 TWISTNBQ3B726 338 aaPredicted RBP18.69■□□□□ 0.58
TRIM23-202ENST00000274327 ZNF530Q6P9A1 599 aaPredicted RBP18.69■□□□□ 0.58
TRIM23-202ENST00000274327 PKD1L3Q7Z443 1732 aa18.69■□□□□ 0.58
TRIM23-202ENST00000274327 MEGF6O75095 1541 aa18.69■□□□□ 0.58
TRIM23-202ENST00000274327 OVOS2A0A0G2JMS6 1433 aa18.68■□□□□ 0.58
TRIM23-202ENST00000274327 CANXP27824 592 aaKnown RBP18.68■□□□□ 0.58
TRIM23-202ENST00000274327 FRAT1Q92837 279 aaPredicted RBP18.68■□□□□ 0.58
TRIM23-202ENST00000274327 COL14A1Q05707 1796 aaKnown RBP18.67■□□□□ 0.58
TRIM23-202ENST00000274327 ZKSCAN2Q63HK3 967 aa18.67■□□□□ 0.58
TRIM23-202ENST00000274327 RAPGEF4Q8WZA2 1011 aa18.67■□□□□ 0.58
TRIM23-202ENST00000274327 CCDC136Q96JN2 1154 aa18.67■□□□□ 0.58
TRIM23-202ENST00000274327 TSPYL4Q9UJ04 414 aa18.67■□□□□ 0.58
TRIM23-202ENST00000274327 TATP17735 454 aaPredicted RBP18.66■□□□□ 0.58
TRIM23-202ENST00000274327 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.66■□□□□ 0.581e-7■■□□□ 12.1
TRIM23-202ENST00000274327 PARP4Q9UKK3 1724 aaKnown RBP18.66■□□□□ 0.58
TRIM23-202ENST00000274327 TAF7Q15545 349 aaPredicted RBP18.65■□□□□ 0.58
TRIM23-202ENST00000274327 MRPL50Q8N5N7 158 aaKnown RBP18.65■□□□□ 0.58
TRIM23-202ENST00000274327 KDM3BQ7LBC6 1761 aa18.65■□□□□ 0.58
TRIM23-202ENST00000274327 KIF16BQ96L93 1317 aa18.65■□□□□ 0.58
TRIM23-202ENST00000274327 SIPA1L3O60292 1781 aaPredicted RBP18.65■□□□□ 0.58
TRIM23-202ENST00000274327 C1orf141Q5JVX7 400 aa18.65■□□□□ 0.58
TRIM23-202ENST00000274327 PANK1Q8TE04 598 aa18.65■□□□□ 0.58
TRIM23-202ENST00000274327 LGR6Q9HBX8 967 aa18.65■□□□□ 0.58
TRIM23-202ENST00000274327 MIS18AQ9NYP9 233 aa18.65■□□□□ 0.58
TRIM23-202ENST00000274327 TNNQ9UQP3 1299 aa18.65■□□□□ 0.58
TRIM23-202ENST00000274327 ELL2O00472 640 aaPredicted RBP18.64■□□□□ 0.57
TRIM23-202ENST00000274327 SCN11AQ9UI33 1791 aa18.63■□□□□ 0.57
TRIM23-202ENST00000274327 RNMTO43148 476 aaKnown RBP18.63■□□□□ 0.57
TRIM23-202ENST00000274327 RLBP1P12271 317 aa18.63■□□□□ 0.57
TRIM23-202ENST00000274327 KRT24Q2M2I5 525 aa18.63■□□□□ 0.57
TRIM23-202ENST00000274327 NOB1Q9ULX3 412 aaKnown RBP18.63■□□□□ 0.57
TRIM23-202ENST00000274327 MS4A1P11836 297 aa18.63■□□□□ 0.57
TRIM23-202ENST00000274327 CARD10Q9BWT7 1032 aa18.63■□□□□ 0.57
TRIM23-202ENST00000274327 ATF7IPQ6VMQ6 1270 aa18.62■□□□□ 0.57
TRIM23-202ENST00000274327 TOM1L2Q6ZVM7 507 aa18.62■□□□□ 0.57
TRIM23-202ENST00000274327 SPG7Q9UQ90 795 aa18.62■□□□□ 0.57
TRIM23-202ENST00000274327 TRIM27P14373 513 aa18.61■□□□□ 0.57
TRIM23-202ENST00000274327 MPRIPQ6WCQ1 1025 aa18.61■□□□□ 0.57
TRIM23-202ENST00000274327 IPO8O15397 1037 aaKnown RBP18.6■□□□□ 0.57
TRIM23-202ENST00000274327 DZIP1LQ8IYY4 767 aaKnown RBP18.6■□□□□ 0.57
TRIM23-202ENST00000274327 COG6Q9Y2V7 657 aa18.6■□□□□ 0.57
TRIM23-202ENST00000274327 PHKG2P15735 406 aa18.6■□□□□ 0.57
TRIM23-202ENST00000274327 PIP4K2BP78356 416 aa18.6■□□□□ 0.57
TRIM23-202ENST00000274327 ARHGAP45Q92619 1136 aa18.6■□□□□ 0.57
TRIM23-202ENST00000274327 SOS1Q07889 1333 aaPredicted RBP18.59■□□□□ 0.57
TRIM23-202ENST00000274327 UBAP1LF5GYI3 381 aa18.59■□□□□ 0.57
TRIM23-202ENST00000274327 LARP1Q6PKG0 1096 aaKnown RBP18.59■□□□□ 0.57
TRIM23-202ENST00000274327 KDM6AO15550 1401 aaPredicted RBP18.58■□□□□ 0.57
TRIM23-202ENST00000274327 EVA1CP58658 441 aa18.58■□□□□ 0.56
TRIM23-202ENST00000274327 TEFQ10587 303 aa18.58■□□□□ 0.56
TRIM23-202ENST00000274327 AAMPQ13685 434 aa18.58■□□□□ 0.56
TRIM23-202ENST00000274327 MVPQ14764 893 aaKnown RBP18.58■□□□□ 0.56
TRIM23-202ENST00000274327 IFNL2Q8IZJ0 200 aa18.58■□□□□ 0.56
TRIM23-202ENST00000274327 CLUAP1Q96AJ1 413 aa18.58■□□□□ 0.56
TRIM23-202ENST00000274327 STRN4Q9NRL3 753 aa18.58■□□□□ 0.56
TRIM23-202ENST00000274327 PLCH1Q4KWH8 1693 aa18.58■□□□□ 0.56
TRIM23-202ENST00000274327 SHANK3Q9BYB0 1731 aa18.57■□□□□ 0.56
TRIM23-202ENST00000274327 FTSJ3Q8IY81 847 aaKnown RBP18.57■□□□□ 0.56
TRIM23-202ENST00000274327 ANP32EQ9BTT0 268 aa18.57■□□□□ 0.56
TRIM23-202ENST00000274327 BTG4Q9NY30 223 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms