RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 BCL11BQ9C0K0 894 aaPredicted RBP12.8□□□□□ -0.36
TPM3-201ENST00000271850 SLC12A5Q9H2X9 1139 aa12.8□□□□□ -0.36
TPM3-201ENST00000271850 ERBB3P21860 1342 aa12.8□□□□□ -0.36
TPM3-201ENST00000271850 MNX1P50219 401 aaPredicted RBP12.79□□□□□ -0.36
TPM3-201ENST00000271850 TESK2Q96S53 571 aa12.79□□□□□ -0.36
TPM3-201ENST00000271850 CARD11Q9BXL7 1154 aa12.79□□□□□ -0.36
TPM3-201ENST00000271850 NHSQ6T4R5 1651 aa12.78□□□□□ -0.36
TPM3-201ENST00000271850 POTEMA6NI47 508 aa12.78□□□□□ -0.36
TPM3-201ENST00000271850 KCNQ2O43526 872 aa12.78□□□□□ -0.36
TPM3-201ENST00000271850 PELP1Q8IZL8 1130 aaKnown RBP12.78□□□□□ -0.36
TPM3-201ENST00000271850 CCDC7Q96M83 1385 aa12.78□□□□□ -0.36
TPM3-201ENST00000271850 EDC4Q6P2E9 1401 aaKnown RBP12.78□□□□□ -0.36
TPM3-201ENST00000271850 PAPPAQ13219 1627 aa12.77□□□□□ -0.36
TPM3-201ENST00000271850 C11orf95C9JLR9 678 aaPredicted RBP12.77□□□□□ -0.37
TPM3-201ENST00000271850 CSB-PGBD3P0DP91 1061 aa12.77□□□□□ -0.37
TPM3-201ENST00000271850 NBPF14Q5TI25 921 aa12.77□□□□□ -0.37
TPM3-201ENST00000271850 SLC39A7Q92504 469 aa12.77□□□□□ -0.37
TPM3-201ENST00000271850 CDCA7Q9BWT1 371 aaPredicted RBP12.77□□□□□ -0.37
TPM3-201ENST00000271850 C7P10643 843 aa12.76□□□□□ -0.37
TPM3-201ENST00000271850 METRNQ9UJH8 293 aa12.76□□□□□ -0.37
TPM3-201ENST00000271850 MYOM1P52179 1685 aa12.75□□□□□ -0.37
TPM3-201ENST00000271850 TXNRD1Q16881 649 aa12.75□□□□□ -0.37
TPM3-201ENST00000271850 ASTLQ6HA08 431 aaPredicted RBP12.75□□□□□ -0.37
TPM3-201ENST00000271850 TMC1Q8TDI8 760 aa12.75□□□□□ -0.37
TPM3-201ENST00000271850 MS4A3Q96HJ5 214 aa12.75□□□□□ -0.37
TPM3-201ENST00000271850 FAM208AQ9UK61 1670 aaKnown RBP12.74□□□□□ -0.37
TPM3-201ENST00000271850 EXOC5O00471 708 aa12.74□□□□□ -0.37
TPM3-201ENST00000271850 FBLN1P23142 703 aa12.74□□□□□ -0.37
TPM3-201ENST00000271850 PTGER2P43116 358 aa12.74□□□□□ -0.37
TPM3-201ENST00000271850 POTEGQ6S5H5 508 aa12.74□□□□□ -0.37
TPM3-201ENST00000271850 ANKRD24Q8TF21 1146 aa12.74□□□□□ -0.37
TPM3-201ENST00000271850 ACSBG1Q96GR2 724 aa12.74□□□□□ -0.37
TPM3-201ENST00000271850 SPON1Q9HCB6 807 aa12.74□□□□□ -0.37
TPM3-201ENST00000271850 TONSLQ96HA7 1378 aa12.73□□□□□ -0.37
TPM3-201ENST00000271850 MAMSTRQ6ZN01 415 aa12.73□□□□□ -0.37
TPM3-201ENST00000271850 BTAF1O14981 1849 aa12.73□□□□□ -0.37
TPM3-201ENST00000271850 SHANK3Q9BYB0 1731 aa12.73□□□□□ -0.37
TPM3-201ENST00000271850 ST20-MTHFSA0A0A6YYL1 179 aa12.72□□□□□ -0.37
TPM3-201ENST00000271850 ZBTB7AO95365 584 aa12.72□□□□□ -0.37
TPM3-201ENST00000271850 PUS7Q96PZ0 661 aaKnown RBP12.72□□□□□ -0.37
TPM3-201ENST00000271850 SGIP1Q9BQI5 828 aa12.72□□□□□ -0.37
TPM3-201ENST00000271850 NLRP2Q9NX02 1062 aa12.72□□□□□ -0.37
TPM3-201ENST00000271850 NINLQ9Y2I6 1382 aa12.71□□□□□ -0.37
TPM3-201ENST00000271850 ATMINO43313 823 aaPredicted RBP12.71□□□□□ -0.37
TPM3-201ENST00000271850 IL2RBP14784 551 aa12.71□□□□□ -0.37
TPM3-201ENST00000271850 HDGFL2Q7Z4V5 671 aaPredicted RBP12.71□□□□□ -0.37
TPM3-201ENST00000271850 RGPD2P0DJD1 1756 aa12.71□□□□□ -0.38
TPM3-201ENST00000271850 MAP3K19Q56UN5 1328 aa12.7□□□□□ -0.38
TPM3-201ENST00000271850 SLC15A2Q16348 729 aa12.7□□□□□ -0.38
TPM3-201ENST00000271850 ZNF827Q17R98 1081 aa12.7□□□□□ -0.38
TPM3-201ENST00000271850 IP6K1Q92551 441 aa12.7□□□□□ -0.38
TPM3-201ENST00000271850 LRRC4BQ9NT99 713 aa12.7□□□□□ -0.38
TPM3-201ENST00000271850 MEGF6O75095 1541 aa12.69□□□□□ -0.38
TPM3-201ENST00000271850 NSD2O96028 1365 aa12.69□□□□□ -0.38
TPM3-201ENST00000271850 TERF2IPQ9NYB0 399 aa12.68□□□□□ -0.38
TPM3-201ENST00000271850 PCDH10Q9P2E7 1040 aa12.68□□□□□ -0.38
TPM3-201ENST00000271850 GOLGB1Q14789 3259 aaKnown RBP12.68□□□□□ -0.38
TPM3-201ENST00000271850 ANKRD36BQ8N2N9 1353 aa12.68□□□□□ -0.38
TPM3-201ENST00000271850 HOXC9P31274 260 aa12.67□□□□□ -0.38
TPM3-201ENST00000271850 LTV1Q96GA3 475 aaPredicted RBP12.67□□□□□ -0.38
TPM3-201ENST00000271850 TSPYL2Q9H2G4 693 aaPredicted RBP12.67□□□□□ -0.38
TPM3-201ENST00000271850 STK32BQ9NY57 414 aa12.67□□□□□ -0.38
TPM3-201ENST00000271850 PPP1R1BQ9UD71 204 aaPredicted RBP12.67□□□□□ -0.38
TPM3-201ENST00000271850 DOT1LQ8TEK3 1739 aa12.66□□□□□ -0.38
TPM3-201ENST00000271850 TUBGCP6Q96RT7 1819 aa12.66□□□□□ -0.38
TPM3-201ENST00000271850 YY1P25490 414 aa12.65□□□□□ -0.38
TPM3-201ENST00000271850 RRS1Q15050 365 aaKnown RBP12.65□□□□□ -0.38
TPM3-201ENST00000271850 COL24A1Q17RW2 1714 aa12.65□□□□□ -0.38
TPM3-201ENST00000271850 FYB1O15117 783 aa12.64□□□□□ -0.39
TPM3-201ENST00000271850 KCNQ4P56696 695 aa12.64□□□□□ -0.39
TPM3-201ENST00000271850 FHDC1Q9C0D6 1143 aaPredicted RBP12.64□□□□□ -0.39
TPM3-201ENST00000271850 LY75O60449 1722 aa12.64□□□□□ -0.39
TPM3-201ENST00000271850 USP47Q96K76 1375 aa12.64□□□□□ -0.39
TPM3-201ENST00000271850 QSER1Q2KHR3 1735 aa12.63□□□□□ -0.39
TPM3-201ENST00000271850 NBPF6Q5VWK0 638 aa12.63□□□□□ -0.39
TPM3-201ENST00000271850 DDX54Q8TDD1 881 aaKnown RBP12.63□□□□□ -0.39
TPM3-201ENST00000271850 COG3Q96JB2 828 aa12.63□□□□□ -0.39
TPM3-201ENST00000271850 NBPF4Q96M43 638 aa12.63□□□□□ -0.39
TPM3-201ENST00000271850 MTFR1LQ9H019 292 aa12.63□□□□□ -0.39
TPM3-201ENST00000271850 GGNBP2Q9H3C7 697 aa12.63□□□□□ -0.39
TPM3-201ENST00000271850 RTL1A6NKG5 1358 aa12.62□□□□□ -0.39
TPM3-201ENST00000271850 USHBP1Q8N6Y0 703 aa12.62□□□□□ -0.39
TPM3-201ENST00000271850 SYT17Q9BSW7 474 aa12.62□□□□□ -0.39
TPM3-201ENST00000271850 SCUBE2Q9NQ36 999 aa12.62□□□□□ -0.39
TPM3-201ENST00000271850 PNPLA7Q6ZV29 1317 aa12.62□□□□□ -0.39
TPM3-201ENST00000271850 KIF20BQ96Q89 1820 aa12.61□□□□□ -0.39
TPM3-201ENST00000271850 CARD14Q9BXL6 1004 aa12.61□□□□□ -0.39
TPM3-201ENST00000271850 KAT6BQ8WYB5 2073 aa12.61□□□□□ -0.39
TPM3-201ENST00000271850 AMPHP49418 695 aa12.6□□□□□ -0.39
TPM3-201ENST00000271850 PRIM1P49642 420 aaKnown RBP12.6□□□□□ -0.39
TPM3-201ENST00000271850 TOGARAM1Q9Y4F4 1720 aa12.59□□□□□ -0.39
TPM3-201ENST00000271850 MAP3K5Q99683 1374 aa12.59□□□□□ -0.39
TPM3-201ENST00000271850 HSP90AB2PQ58FF8 381 aa12.59□□□□□ -0.39
TPM3-201ENST00000271850 NCAPD2Q15021 1401 aa12.58□□□□□ -0.4
TPM3-201ENST00000271850 ZCRB1Q8TBF4 217 aaKnown RBP12.58□□□□□ -0.4
TPM3-201ENST00000271850 INSRP06213 1382 aa12.57□□□□□ -0.4
TPM3-201ENST00000271850 ANKRD26Q9UPS8 1709 aa12.57□□□□□ -0.4
TPM3-201ENST00000271850 POTEJP0CG39 1038 aa12.57□□□□□ -0.4
TPM3-201ENST00000271850 ATN1P54259 1190 aaPredicted RBP12.57□□□□□ -0.4
TPM3-201ENST00000271850 TMF1P82094 1093 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms