RNA–Protein interactions for RNA: ENST00000268720.9

CPNE7-201, Transcript of copine 7, humanhuman

TSL 1 (best) BASIC

Gene CPNE7, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-201ENST00000268720 KCNA6P17658 529 aa23.82■■□□□ 1.4
CPNE7-201ENST00000268720 SMARCA5O60264 1052 aaPredicted RBP23.82■■□□□ 1.4
CPNE7-201ENST00000268720 MTHFSDQ2M296 383 aaKnown RBP23.81■■□□□ 1.4
CPNE7-201ENST00000268720 API5Q9BZZ5 524 aaKnown RBP23.81■■□□□ 1.4
CPNE7-201ENST00000268720 TTC21AQ8NDW8 1320 aa23.8■■□□□ 1.4
CPNE7-201ENST00000268720 NECTIN2Q92692 538 aa23.8■■□□□ 1.4
CPNE7-201ENST00000268720 DIP2AQ14689 1571 aa23.8■■□□□ 1.4
CPNE7-201ENST00000268720 HSCBQ8IWL3 235 aa23.8■■□□□ 1.4
CPNE7-201ENST00000268720 RGPD1P0DJD0 1748 aa23.8■■□□□ 1.4
CPNE7-201ENST00000268720 MCM4P33991 863 aa23.79■■□□□ 1.4
CPNE7-201ENST00000268720 EYA1Q99502 592 aa23.79■■□□□ 1.4
CPNE7-201ENST00000268720 RIMS1Q86UR5 1692 aaKnown RBP23.78■■□□□ 1.4
CPNE7-201ENST00000268720 AMPHP49418 695 aa23.78■■□□□ 1.4
CPNE7-201ENST00000268720 GCC1Q96CN9 775 aa23.78■■□□□ 1.4
CPNE7-201ENST00000268720 FER1L4A9Z1Z3 1794 aa23.78■■□□□ 1.4
CPNE7-201ENST00000268720 NLRP6P59044 892 aa23.77■■□□□ 1.4
CPNE7-201ENST00000268720 FLT4P35916 1363 aa23.77■■□□□ 1.4
CPNE7-201ENST00000268720 TBC1D9Q6ZT07 1266 aa23.77■■□□□ 1.4
CPNE7-201ENST00000268720 RBM33Q96EV2 1170 aaKnown RBP23.77■■□□□ 1.4
CPNE7-201ENST00000268720 CHMP4BQ9H444 224 aaKnown RBP23.77■■□□□ 1.4
CPNE7-201ENST00000268720 CRB1P82279 1406 aa23.77■■□□□ 1.4
CPNE7-201ENST00000268720 EIF5BO60841 1220 aaKnown RBP23.77■■□□□ 1.39
CPNE7-201ENST00000268720 SBNO1A3KN83 1393 aa23.76■■□□□ 1.39
CPNE7-201ENST00000268720 RGS12O14924 1447 aa23.75■■□□□ 1.39
CPNE7-201ENST00000268720 HSP90AB1P08238 724 aaKnown RBP23.75■■□□□ 1.39
CPNE7-201ENST00000268720 TSHZ3Q63HK5 1081 aa23.75■■□□□ 1.39
CPNE7-201ENST00000268720 HSP90AA1P07900 732 aaKnown RBP23.75■■□□□ 1.39
CPNE7-201ENST00000268720 CEP170BQ9Y4F5 1589 aaPredicted RBP23.75■■□□□ 1.39
CPNE7-201ENST00000268720 ARHGEF10O15013 1369 aa23.74■■□□□ 1.39
CPNE7-201ENST00000268720 CHMP5Q9NZZ3 219 aa23.74■■□□□ 1.39
CPNE7-201ENST00000268720 INTS3Q68E01 1043 aaKnown RBP23.74■■□□□ 1.39
CPNE7-201ENST00000268720 FAM43AQ8N2R8 423 aa23.74■■□□□ 1.39
CPNE7-201ENST00000268720 PIK3C2AO00443 1686 aa23.74■■□□□ 1.39
CPNE7-201ENST00000268720 F6X3S4 739 aa23.73■■□□□ 1.39
CPNE7-201ENST00000268720 SLC4A10Q6U841 1118 aa23.73■■□□□ 1.39
CPNE7-201ENST00000268720 GSPT1P15170 499 aaKnown RBP23.73■■□□□ 1.39
CPNE7-201ENST00000268720 BMP2KLQ5H9B9 411 aa23.73■■□□□ 1.39
CPNE7-201ENST00000268720 SLC4A2P04920 1241 aa23.72■■□□□ 1.39
CPNE7-201ENST00000268720 KIF2CQ99661 725 aa23.72■■□□□ 1.39
CPNE7-201ENST00000268720 KDRP35968 1356 aa23.72■■□□□ 1.39
CPNE7-201ENST00000268720 KIAA0232Q92628 1395 aa23.72■■□□□ 1.39
CPNE7-201ENST00000268720 XRCC6P12956 609 aaKnown RBP eCLIP23.72■■□□□ 1.394e-6■■■□□ 18.2
CPNE7-201ENST00000268720 RRAGDQ9NQL2 400 aaPredicted RBP23.72■■□□□ 1.39
CPNE7-201ENST00000268720 IGSF1Q8N6C5 1336 aa23.72■■□□□ 1.39
CPNE7-201ENST00000268720 TRAK2O60296 914 aa23.71■■□□□ 1.39
CPNE7-201ENST00000268720 RTF1Q92541 710 aaKnown RBP23.71■■□□□ 1.39
CPNE7-201ENST00000268720 TRHP20396 242 aaPredicted RBP23.7■■□□□ 1.39
CPNE7-201ENST00000268720 L1TD1Q5T7N2 865 aaKnown RBP23.7■■□□□ 1.39
CPNE7-201ENST00000268720 TSPYL4Q9UJ04 414 aa23.7■■□□□ 1.39
CPNE7-201ENST00000268720 XRN1Q8IZH2 1706 aaKnown RBP23.7■■□□□ 1.38
CPNE7-201ENST00000268720 FMN2Q9NZ56 1722 aa23.7■■□□□ 1.38
CPNE7-201ENST00000268720 G2E3Q7L622 706 aa23.7■■□□□ 1.38
CPNE7-201ENST00000268720 GOLGA6L3A6NEY3 463 aa23.69■■□□□ 1.38
CPNE7-201ENST00000268720 ABTB2Q8N961 1025 aa23.69■■□□□ 1.38
CPNE7-201ENST00000268720 CHAMP1Q96JM3 812 aa23.69■■□□□ 1.38
CPNE7-201ENST00000268720 MSH6P52701 1360 aa23.69■■□□□ 1.38
CPNE7-201ENST00000268720 LTV1Q96GA3 475 aaPredicted RBP23.69■■□□□ 1.38
CPNE7-201ENST00000268720 MEIS3Q99687 375 aa23.69■■□□□ 1.38
CPNE7-201ENST00000268720 HOXC9P31274 260 aa23.68■■□□□ 1.38
CPNE7-201ENST00000268720 TNPO1Q92973 898 aaKnown RBP23.67■■□□□ 1.38
CPNE7-201ENST00000268720 DCTPP1Q9H773 170 aa23.67■■□□□ 1.38
CPNE7-201ENST00000268720 ATP10DQ9P241 1426 aa23.67■■□□□ 1.38
CPNE7-201ENST00000268720 HAP1P54257 671 aaPredicted RBP23.67■■□□□ 1.38
CPNE7-201ENST00000268720 C14orf37Q86TY3 774 aa23.67■■□□□ 1.38
CPNE7-201ENST00000268720 KIF24Q5T7B8 1368 aa23.65■■□□□ 1.38
CPNE7-201ENST00000268720 GAS2L2Q8NHY3 880 aa23.65■■□□□ 1.38
CPNE7-201ENST00000268720 RBM25P49756 843 aaKnown RBP23.65■■□□□ 1.38
CPNE7-201ENST00000268720 CEP85Q6P2H3 762 aa23.65■■□□□ 1.38
CPNE7-201ENST00000268720 ANKRD44Q8N8A2 993 aa23.65■■□□□ 1.38
CPNE7-201ENST00000268720 PTPRCP08575 1304 aa23.64■■□□□ 1.38
CPNE7-201ENST00000268720 RTL1A6NKG5 1358 aa23.64■■□□□ 1.37
CPNE7-201ENST00000268720 FOXD4L5Q5VV16 416 aaPredicted RBP23.64■■□□□ 1.37
CPNE7-201ENST00000268720 PLEKHM2Q8IWE5 1019 aa23.64■■□□□ 1.37
CPNE7-201ENST00000268720 USHBP1Q8N6Y0 703 aa23.64■■□□□ 1.37
CPNE7-201ENST00000268720 FOXD4L4Q8WXT5 416 aaPredicted RBP23.64■■□□□ 1.37
CPNE7-201ENST00000268720 SSFA2P28290 1259 aa23.63■■□□□ 1.37
CPNE7-201ENST00000268720 ANKARQ7Z5J8 1434 aa23.63■■□□□ 1.37
CPNE7-201ENST00000268720 FSD2A1L4K1 749 aa23.62■■□□□ 1.37
CPNE7-201ENST00000268720 MARF1Q9Y4F3 1742 aaKnown RBP23.61■■□□□ 1.37
CPNE7-201ENST00000268720 PKP1Q13835 747 aa23.61■■□□□ 1.37
CPNE7-201ENST00000268720 IL17REQ8NFR9 667 aa23.6■■□□□ 1.37
CPNE7-201ENST00000268720 ZBTB7CA1YPR0 619 aa23.6■■□□□ 1.37
CPNE7-201ENST00000268720 NOL8Q76FK4 1167 aaKnown RBP23.6■■□□□ 1.37
CPNE7-201ENST00000268720 RPAP2Q8IXW5 612 aaPredicted RBP23.6■■□□□ 1.37
CPNE7-201ENST00000268720 GNAT3A8MTJ3 354 aa23.59■■□□□ 1.37
CPNE7-201ENST00000268720 PHF8Q9UPP1 1060 aa23.59■■□□□ 1.37
CPNE7-201ENST00000268720 NWD1Q149M9 1564 aa23.59■■□□□ 1.37
CPNE7-201ENST00000268720 PRKCSHP14314 528 aaPredicted RBP23.58■■□□□ 1.37
CPNE7-201ENST00000268720 GAS2L3Q86XJ1 694 aa23.58■■□□□ 1.37
CPNE7-201ENST00000268720 EXOC6BQ9Y2D4 811 aa23.58■■□□□ 1.37
CPNE7-201ENST00000268720 AK9Q5TCS8 1911 aa23.58■■□□□ 1.36
CPNE7-201ENST00000268720 DDIT3P35638 169 aa23.57■■□□□ 1.36
CPNE7-201ENST00000268720 ANKLE2Q86XL3 938 aa23.56■■□□□ 1.36
CPNE7-201ENST00000268720 DTNBO60941 627 aa23.56■■□□□ 1.36
CPNE7-201ENST00000268720 SNX21Q969T3 373 aa23.56■■□□□ 1.36
CPNE7-201ENST00000268720 TPRNQ4KMQ1 711 aa23.55■■□□□ 1.36
CPNE7-201ENST00000268720 TTC22Q5TAA0 569 aa23.55■■□□□ 1.36
CPNE7-201ENST00000268720 CDC45O75419 566 aa23.54■■□□□ 1.36
CPNE7-201ENST00000268720 SDSP20132 328 aa23.54■■□□□ 1.36
CPNE7-201ENST00000268720 ESCO1Q5FWF5 840 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms