RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 SMARCA5O60264 1052 aaPredicted RBP20.02■□□□□ 0.79
PHRF1-201ENST00000264555 AEBP1Q8IUX7 1158 aa20.01■□□□□ 0.79
PHRF1-201ENST00000264555 FAM83GA6ND36 823 aa20.01■□□□□ 0.79
PHRF1-201ENST00000264555 FBLN1P23142 703 aa20.01■□□□□ 0.79
PHRF1-201ENST00000264555 TTC21AQ8NDW8 1320 aa20.01■□□□□ 0.79
PHRF1-201ENST00000264555 PLEKHH1Q9ULM0 1364 aa20.01■□□□□ 0.79
PHRF1-201ENST00000264555 ATP7AQ04656 1500 aa20.01■□□□□ 0.79
PHRF1-201ENST00000264555 FAM43AQ8N2R8 423 aa20.01■□□□□ 0.79
PHRF1-201ENST00000264555 ARID3AQ99856 593 aa20.01■□□□□ 0.79
PHRF1-201ENST00000264555 CNNM1Q9NRU3 951 aa20.01■□□□□ 0.79
PHRF1-201ENST00000264555 TPM3P06753 285 aa20.01■□□□□ 0.79
PHRF1-201ENST00000264555 NUTM1Q86Y26 1132 aa20.01■□□□□ 0.79
PHRF1-201ENST00000264555 CWC27Q6UX04 472 aaKnown RBP20■□□□□ 0.79
PHRF1-201ENST00000264555 FLIIQ13045 1269 aa20■□□□□ 0.79
PHRF1-201ENST00000264555 FOXO3O43524 673 aa20■□□□□ 0.79
PHRF1-201ENST00000264555 DHX16O60231 1041 aaKnown RBP20■□□□□ 0.79
PHRF1-201ENST00000264555 ADGBQ8N7X0 1667 aa20■□□□□ 0.79
PHRF1-201ENST00000264555 CCDC57Q2TAC2 916 aa19.99■□□□□ 0.79
PHRF1-201ENST00000264555 BMP2KLQ5H9B9 411 aa19.99■□□□□ 0.79
PHRF1-201ENST00000264555 LARP1Q6PKG0 1096 aaKnown RBP19.99■□□□□ 0.79
PHRF1-201ENST00000264555 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.99■□□□□ 0.793e-7■■■□□ 16.9
PHRF1-201ENST00000264555 GLRX3O76003 335 aaKnown RBP19.99■□□□□ 0.79
PHRF1-201ENST00000264555 ARHGEF5Q12774 1597 aa19.99■□□□□ 0.79
PHRF1-201ENST00000264555 TPM1P09493 284 aa19.99■□□□□ 0.79
PHRF1-201ENST00000264555 RBM33Q96EV2 1170 aaKnown RBP19.99■□□□□ 0.79
PHRF1-201ENST00000264555 POLKQ9UBT6 870 aa19.99■□□□□ 0.79
PHRF1-201ENST00000264555 RNF214Q8ND24 703 aa19.98■□□□□ 0.79
PHRF1-201ENST00000264555 SART3Q15020 963 aaKnown RBP19.98■□□□□ 0.79
PHRF1-201ENST00000264555 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.98■□□□□ 0.79
PHRF1-201ENST00000264555 DNAAF4Q8WXU2 420 aa19.98■□□□□ 0.79
PHRF1-201ENST00000264555 CCDC39Q9UFE4 941 aa19.98■□□□□ 0.79
PHRF1-201ENST00000264555 ZSCAN31Q96LW9 406 aaPredicted RBP19.98■□□□□ 0.79
PHRF1-201ENST00000264555 TSPY26PQ9H489 355 aa19.98■□□□□ 0.79
PHRF1-201ENST00000264555 MEX3CQ5U5Q3 659 aaKnown RBP19.98■□□□□ 0.79
PHRF1-201ENST00000264555 PES1O00541 588 aaKnown RBP19.97■□□□□ 0.79
PHRF1-201ENST00000264555 TSR1Q2NL82 804 aaKnown RBP19.97■□□□□ 0.79
PHRF1-201ENST00000264555 DBF4Q9UBU7 674 aaPredicted RBP19.97■□□□□ 0.79
PHRF1-201ENST00000264555 FIBPO43427 364 aa19.97■□□□□ 0.79
PHRF1-201ENST00000264555 MPRIPQ6WCQ1 1025 aa19.97■□□□□ 0.79
PHRF1-201ENST00000264555 PCDHB15Q9Y5E8 787 aa19.97■□□□□ 0.79
PHRF1-201ENST00000264555 FAM177BA6PVY3 158 aa19.97■□□□□ 0.79
PHRF1-201ENST00000264555 BLOC1S2Q6QNY1 142 aa19.97■□□□□ 0.79
PHRF1-201ENST00000264555 PDRG1Q9NUG6 133 aa19.96■□□□□ 0.79
PHRF1-201ENST00000264555 LRRFIP2Q9Y608 721 aaKnown RBP19.96■□□□□ 0.79
PHRF1-201ENST00000264555 HSP90AB2PQ58FF8 381 aa19.96■□□□□ 0.79
PHRF1-201ENST00000264555 NAT10Q9H0A0 1025 aaKnown RBP19.96■□□□□ 0.79
PHRF1-201ENST00000264555 A0A1W2PP64 1363 aa19.96■□□□□ 0.79
PHRF1-201ENST00000264555 SDF4Q9BRK5 362 aa19.95■□□□□ 0.78
PHRF1-201ENST00000264555 TBC1D2Q9BYX2 928 aa19.95■□□□□ 0.78
PHRF1-201ENST00000264555 CEP126Q9P2H0 1117 aa19.95■□□□□ 0.78
PHRF1-201ENST00000264555 JAKMIP1Q96N16 626 aaKnown RBP19.95■□□□□ 0.78
PHRF1-201ENST00000264555 SPATA31E1Q6ZUB1 1445 aa19.95■□□□□ 0.78
PHRF1-201ENST00000264555 TPM2P07951 284 aa19.95■□□□□ 0.78
PHRF1-201ENST00000264555 XBP1P17861 261 aa19.95■□□□□ 0.78
PHRF1-201ENST00000264555 HYPKQ9NX55 129 aa19.95■□□□□ 0.78
PHRF1-201ENST00000264555 KRT32Q14532 448 aa19.95■□□□□ 0.78
PHRF1-201ENST00000264555 HSP90AA2PQ14568 343 aaPredicted RBP19.95■□□□□ 0.78
PHRF1-201ENST00000264555 VPS53Q5VIR6 699 aa19.95■□□□□ 0.78
PHRF1-201ENST00000264555 BRPF3Q9ULD4 1205 aa19.95■□□□□ 0.78
PHRF1-201ENST00000264555 ZFYVE9O95405 1425 aa19.94■□□□□ 0.78
PHRF1-201ENST00000264555 NUCB1Q02818 461 aa19.94■□□□□ 0.78
PHRF1-201ENST00000264555 CCDC173Q0VFZ6 552 aa19.94■□□□□ 0.78
PHRF1-201ENST00000264555 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.94■□□□□ 0.78
PHRF1-201ENST00000264555 ZNF396Q96N95 335 aaPredicted RBP19.94■□□□□ 0.78
PHRF1-201ENST00000264555 CCDC47Q96A33 483 aaKnown RBP19.94■□□□□ 0.78
PHRF1-201ENST00000264555 ANKRD20A12PQ8NF67 263 aa19.93■□□□□ 0.78
PHRF1-201ENST00000264555 YTHDC2Q9H6S0 1430 aaKnown RBP19.93■□□□□ 0.78
PHRF1-201ENST00000264555 INSRP06213 1382 aa19.93■□□□□ 0.78
PHRF1-201ENST00000264555 ABCC1P33527 1531 aa19.93■□□□□ 0.78
PHRF1-201ENST00000264555 TBC1D32Q96NH3 1257 aa19.93■□□□□ 0.78
PHRF1-201ENST00000264555 PDIA4P13667 645 aaKnown RBP19.93■□□□□ 0.78
PHRF1-201ENST00000264555 ZSCAN25Q6NSZ9 544 aa19.93■□□□□ 0.78
PHRF1-201ENST00000264555 LARP1BQ659C4 914 aaKnown RBP19.92■□□□□ 0.78
PHRF1-201ENST00000264555 TRIM34Q9BYJ4 488 aa19.92■□□□□ 0.78
PHRF1-201ENST00000264555 BRMS1Q9HCU9 246 aa19.92■□□□□ 0.78
PHRF1-201ENST00000264555 MBD5Q9P267 1494 aa19.92■□□□□ 0.78
PHRF1-201ENST00000264555 MRPL50Q8N5N7 158 aaKnown RBP19.92■□□□□ 0.78
PHRF1-201ENST00000264555 KINO60870 393 aaKnown RBP19.92■□□□□ 0.78
PHRF1-201ENST00000264555 GRPEL1Q9HAV7 217 aa19.92■□□□□ 0.78
PHRF1-201ENST00000264555 NPATQ14207 1427 aa19.92■□□□□ 0.78
PHRF1-201ENST00000264555 TBC1D9Q6ZT07 1266 aa19.91■□□□□ 0.78
PHRF1-201ENST00000264555 GNL3LQ9NVN8 582 aaKnown RBP19.91■□□□□ 0.78
PHRF1-201ENST00000264555 STK3Q13188 491 aa19.91■□□□□ 0.78
PHRF1-201ENST00000264555 EIF4A2Q14240 407 aaKnown RBP19.91■□□□□ 0.78
PHRF1-201ENST00000264555 KRT85P78386 507 aa19.91■□□□□ 0.78
PHRF1-201ENST00000264555 KRT28Q7Z3Y7 464 aa19.91■□□□□ 0.78
PHRF1-201ENST00000264555 PIK3R4Q99570 1358 aa19.91■□□□□ 0.78
PHRF1-201ENST00000264555 ABCA8O94911 1581 aa19.91■□□□□ 0.78
PHRF1-201ENST00000264555 FBXW7Q969H0 707 aa19.91■□□□□ 0.78
PHRF1-201ENST00000264555 FKBP4Q02790 459 aaKnown RBP eCLIP19.9■□□□□ 0.783e-6■□□□□ 10.7
PHRF1-201ENST00000264555 STARD3NLO95772 234 aa19.9■□□□□ 0.78
PHRF1-201ENST00000264555 CTNNA3Q9UI47 895 aa19.9■□□□□ 0.78
PHRF1-201ENST00000264555 ZNF592Q92610 1267 aa19.9■□□□□ 0.78
PHRF1-201ENST00000264555 MYD88Q99836 296 aa19.9■□□□□ 0.78
PHRF1-201ENST00000264555 CASTP20810 708 aaKnown RBP19.89■□□□□ 0.77
PHRF1-201ENST00000264555 C8orf58Q8NAV2 365 aa19.89■□□□□ 0.77
PHRF1-201ENST00000264555 MPHOSPH8Q99549 860 aa19.89■□□□□ 0.77
PHRF1-201ENST00000264555 ZRANB1Q9UGI0 708 aa19.89■□□□□ 0.77
PHRF1-201ENST00000264555 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.88■□□□□ 0.772e-6■■■■□ 19.7
PHRF1-201ENST00000264555 NACAP1Q9BZK3 213 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms