RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 NRAPQ86VF7 1730 aa16.69■□□□□ 0.26
CLNS1A-201ENST00000263309 PCDH11XQ9BZA7 1347 aa16.69■□□□□ 0.26
CLNS1A-201ENST00000263309 PCDH11YQ9BZA8 1340 aa16.69■□□□□ 0.26
CLNS1A-201ENST00000263309 FAM208AQ9UK61 1670 aaKnown RBP16.69■□□□□ 0.26
CLNS1A-201ENST00000263309 MAP2P11137 1827 aaKnown RBP16.68■□□□□ 0.26
CLNS1A-201ENST00000263309 COL18A1P39060 1754 aa16.68■□□□□ 0.26
CLNS1A-201ENST00000263309 OVOS2A0A0G2JMS6 1433 aa16.68■□□□□ 0.26
CLNS1A-201ENST00000263309 PLEKHG2Q9H7P9 1386 aa16.67■□□□□ 0.26
CLNS1A-201ENST00000263309 FCHSD2O94868 740 aa16.67■□□□□ 0.26
CLNS1A-201ENST00000263309 IFNL2Q8IZJ0 200 aa16.67■□□□□ 0.26
CLNS1A-201ENST00000263309 IGSF1Q8N6C5 1336 aa16.66■□□□□ 0.26
CLNS1A-201ENST00000263309 MAPK8IP3Q9UPT6 1336 aa16.66■□□□□ 0.26
CLNS1A-201ENST00000263309 HMOX1P09601 288 aa16.65■□□□□ 0.26
CLNS1A-201ENST00000263309 DEFB132Q7Z7B7 95 aa16.65■□□□□ 0.26
CLNS1A-201ENST00000263309 BAG6P46379 1132 aa16.64■□□□□ 0.25
CLNS1A-201ENST00000263309 GAS2L2Q8NHY3 880 aa16.64■□□□□ 0.25
CLNS1A-201ENST00000263309 DIEXFQ68CQ4 756 aaKnown RBP16.63■□□□□ 0.25
CLNS1A-201ENST00000263309 RTF1Q92541 710 aaKnown RBP16.63■□□□□ 0.25
CLNS1A-201ENST00000263309 SYTL4Q96C24 671 aaPredicted RBP16.63■□□□□ 0.25
CLNS1A-201ENST00000263309 ZNF530Q6P9A1 599 aaPredicted RBP16.61■□□□□ 0.25
CLNS1A-201ENST00000263309 MRS2Q9HD23 443 aa16.61■□□□□ 0.25
CLNS1A-201ENST00000263309 RGPD5Q99666 1765 aa16.61■□□□□ 0.25
CLNS1A-201ENST00000263309 MARCH10Q8NA82 808 aaPredicted RBP16.6■□□□□ 0.25
CLNS1A-201ENST00000263309 BCL11BQ9C0K0 894 aaPredicted RBP16.6■□□□□ 0.25
CLNS1A-201ENST00000263309 TRIM37O94972 964 aa16.59■□□□□ 0.25
CLNS1A-201ENST00000263309 APBA3O96018 575 aa16.59■□□□□ 0.25
CLNS1A-201ENST00000263309 AKAP4Q5JQC9 854 aa16.59■□□□□ 0.25
CLNS1A-201ENST00000263309 DCAF5Q96JK2 942 aa16.59■□□□□ 0.25
CLNS1A-201ENST00000263309 TNS2Q63HR2 1409 aa16.59■□□□□ 0.25
CLNS1A-201ENST00000263309 PRKAR2BP31323 418 aa16.58■□□□□ 0.24
CLNS1A-201ENST00000263309 DISP2A7MBM2 1401 aa16.58■□□□□ 0.24
CLNS1A-201ENST00000263309 PEAK1Q9H792 1746 aa16.58■□□□□ 0.24
CLNS1A-201ENST00000263309 LMOD3Q0VAK6 560 aa16.57■□□□□ 0.24
CLNS1A-201ENST00000263309 FAM182BQ5T319 152 aa16.57■□□□□ 0.24
CLNS1A-201ENST00000263309 BRWD3Q6RI45 1802 aa16.56■□□□□ 0.24
CLNS1A-201ENST00000263309 KDRP35968 1356 aa16.56■□□□□ 0.24
CLNS1A-201ENST00000263309 PHKG2P15735 406 aa16.56■□□□□ 0.24
CLNS1A-201ENST00000263309 CABP4P57796 275 aa16.56■□□□□ 0.24
CLNS1A-201ENST00000263309 AEBP1Q8IUX7 1158 aa16.56■□□□□ 0.24
CLNS1A-201ENST00000263309 TMOD3Q9NYL9 352 aa16.56■□□□□ 0.24
CLNS1A-201ENST00000263309 GNAT3A8MTJ3 354 aa16.55■□□□□ 0.24
CLNS1A-201ENST00000263309 ERVV-2B6SEH9 535 aa16.55■□□□□ 0.24
CLNS1A-201ENST00000263309 SMARCC1Q92922 1105 aaPredicted RBP16.55■□□□□ 0.24
CLNS1A-201ENST00000263309 ACSBG1Q96GR2 724 aa16.55■□□□□ 0.24
CLNS1A-201ENST00000263309 LRP5O75197 1615 aa16.55■□□□□ 0.24
CLNS1A-201ENST00000263309 PARP4Q9UKK3 1724 aaKnown RBP16.54■□□□□ 0.24
CLNS1A-201ENST00000263309 THSD7AQ9UPZ6 1657 aa16.54■□□□□ 0.24
CLNS1A-201ENST00000263309 HTATSF1O43719 755 aaKnown RBP16.54■□□□□ 0.24
CLNS1A-201ENST00000263309 TEFQ10587 303 aa16.54■□□□□ 0.24
CLNS1A-201ENST00000263309 NKX1-1Q15270 411 aaPredicted RBP16.54■□□□□ 0.24
CLNS1A-201ENST00000263309 RUNDC1Q96C34 613 aa16.54■□□□□ 0.24
CLNS1A-201ENST00000263309 PRIM1P49642 420 aaKnown RBP16.53■□□□□ 0.24
CLNS1A-201ENST00000263309 NBPF14Q5TI25 921 aa16.53■□□□□ 0.24
CLNS1A-201ENST00000263309 MPRIPQ6WCQ1 1025 aa16.53■□□□□ 0.24
CLNS1A-201ENST00000263309 RSPH6AQ9H0K4 717 aa16.53■□□□□ 0.24
CLNS1A-201ENST00000263309 BCL9O00512 1426 aa16.53■□□□□ 0.24
CLNS1A-201ENST00000263309 MEGF6O75095 1541 aa16.52■□□□□ 0.24
CLNS1A-201ENST00000263309 MTHFSDQ2M296 383 aaKnown RBP16.52■□□□□ 0.24
CLNS1A-201ENST00000263309 NCAPD2Q15021 1401 aa16.52■□□□□ 0.23
CLNS1A-201ENST00000263309 PLSCR1O15162 318 aa16.51■□□□□ 0.23
CLNS1A-201ENST00000263309 CYP27B1O15528 508 aa16.51■□□□□ 0.23
CLNS1A-201ENST00000263309 PSDA5PKW4 1024 aaPredicted RBP16.5■□□□□ 0.23
CLNS1A-201ENST00000263309 CCER2I3L3R5 266 aa16.5■□□□□ 0.23
CLNS1A-201ENST00000263309 CALD1Q05682 793 aaKnown RBP16.5■□□□□ 0.23
CLNS1A-201ENST00000263309 TTC5Q8N0Z6 440 aa16.49■□□□□ 0.23
CLNS1A-201ENST00000263309 ADAMTS8Q9UP79 889 aa16.49■□□□□ 0.23
CLNS1A-201ENST00000263309 NFE2L2Q16236 605 aa16.48■□□□□ 0.23
CLNS1A-201ENST00000263309 FAM9BQ8IZU0 186 aa16.48■□□□□ 0.23
CLNS1A-201ENST00000263309 PNISRQ8TF01 805 aaKnown RBP16.48■□□□□ 0.23
CLNS1A-201ENST00000263309 RIPK4P57078 832 aa16.47■□□□□ 0.23
CLNS1A-201ENST00000263309 LRRC37A3O60309 1634 aa16.47■□□□□ 0.23
CLNS1A-201ENST00000263309 MAP3K5Q99683 1374 aa16.47■□□□□ 0.23
CLNS1A-201ENST00000263309 COL3A1P02461 1466 aaPredicted RBP16.47■□□□□ 0.23
CLNS1A-201ENST00000263309 EN1Q05925 392 aaPredicted RBP16.46■□□□□ 0.23
CLNS1A-201ENST00000263309 SLC27A3Q5K4L6 730 aa16.46■□□□□ 0.23
CLNS1A-201ENST00000263309 NGEFQ8N5V2 710 aa16.46■□□□□ 0.23
CLNS1A-201ENST00000263309 RNMTO43148 476 aaKnown RBP16.45■□□□□ 0.22
CLNS1A-201ENST00000263309 KCNQ2O43526 872 aa16.45■□□□□ 0.22
CLNS1A-201ENST00000263309 NEUROD2Q15784 382 aa16.45■□□□□ 0.22
CLNS1A-201ENST00000263309 NPM2Q86SE8 214 aaKnown RBP16.45■□□□□ 0.22
CLNS1A-201ENST00000263309 NFATC2IPQ8NCF5 419 aa16.45■□□□□ 0.22
CLNS1A-201ENST00000263309 PHACTR3Q96KR7 559 aa16.45■□□□□ 0.22
CLNS1A-201ENST00000263309 RGPD2P0DJD1 1756 aa16.45■□□□□ 0.22
CLNS1A-201ENST00000263309 CCDC146Q8IYE0 955 aa16.44■□□□□ 0.22
CLNS1A-201ENST00000263309 SLC52A2Q9HAB3 445 aa16.44■□□□□ 0.22
CLNS1A-201ENST00000263309 WNK3Q9BYP7 1800 aa16.44■□□□□ 0.22
CLNS1A-201ENST00000263309 PLEKHF1Q96S99 279 aa16.43■□□□□ 0.22
CLNS1A-201ENST00000263309 BTBD11A6QL63 1104 aa16.42■□□□□ 0.22
CLNS1A-201ENST00000263309 MSH5O43196 834 aa16.42■□□□□ 0.22
CLNS1A-201ENST00000263309 TAF7Q15545 349 aaPredicted RBP16.42■□□□□ 0.22
CLNS1A-201ENST00000263309 PIGBQ92521 554 aa16.42■□□□□ 0.22
CLNS1A-201ENST00000263309 RBM42Q9BTD8 480 aaKnown RBP16.42■□□□□ 0.22
CLNS1A-201ENST00000263309 CHMP4AQ9BY43 222 aa16.42■□□□□ 0.22
CLNS1A-201ENST00000263309 STK32BQ9NY57 414 aa16.42■□□□□ 0.22
CLNS1A-201ENST00000263309 TMPOP42166 694 aaKnown RBP16.41■□□□□ 0.22
CLNS1A-201ENST00000263309 R3HDM1Q15032 1099 aaKnown RBP16.41■□□□□ 0.22
CLNS1A-201ENST00000263309 EZH2Q15910 746 aaKnown RBP16.41■□□□□ 0.22
CLNS1A-201ENST00000263309 TXNRD1Q16881 649 aa16.41■□□□□ 0.22
CLNS1A-201ENST00000263309 TEX13AQ9BXU3 409 aaPredicted RBP16.41■□□□□ 0.22
CLNS1A-201ENST00000263309 CCNL1Q9UK58 526 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms