RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 CARD10Q9BWT7 1032 aa29.61■■■□□ 2.33
UFD1-201ENST00000263202 PARP4Q9UKK3 1724 aaKnown RBP29.6■■■□□ 2.33
UFD1-201ENST00000263202 DCTN1Q14203 1278 aa29.6■■■□□ 2.33
UFD1-201ENST00000263202 AMOTQ4VCS5 1084 aa29.6■■■□□ 2.33
UFD1-201ENST00000263202 SPATA31A6Q5VVP1 1343 aa29.6■■■□□ 2.33
UFD1-201ENST00000263202 CRB1P82279 1406 aa29.6■■■□□ 2.33
UFD1-201ENST00000263202 PLEKHG2Q9H7P9 1386 aa29.59■■■□□ 2.33
UFD1-201ENST00000263202 PKD1L3Q7Z443 1732 aa29.59■■■□□ 2.33
UFD1-201ENST00000263202 CALD1Q05682 793 aaKnown RBP29.59■■■□□ 2.33
UFD1-201ENST00000263202 MAP3K5Q99683 1374 aa29.59■■■□□ 2.33
UFD1-201ENST00000263202 TATP17735 454 aaPredicted RBP29.58■■■□□ 2.33
UFD1-201ENST00000263202 MYH16Q9H6N6 1097 aa29.58■■■□□ 2.33
UFD1-201ENST00000263202 GNAT3A8MTJ3 354 aa29.57■■■□□ 2.32
UFD1-201ENST00000263202 HTATSF1O43719 755 aaKnown RBP29.57■■■□□ 2.32
UFD1-201ENST00000263202 VIRMAQ69YN4 1812 aaKnown RBP29.57■■■□□ 2.32
UFD1-201ENST00000263202 LRRC37A3O60309 1634 aa29.57■■■□□ 2.32
UFD1-201ENST00000263202 MCM10Q7L590 875 aa29.57■■■□□ 2.32
UFD1-201ENST00000263202 RTF1Q92541 710 aaKnown RBP29.56■■■□□ 2.32
UFD1-201ENST00000263202 LRP6O75581 1613 aa29.55■■■□□ 2.32
UFD1-201ENST00000263202 SLIT2O94813 1529 aa29.55■■■□□ 2.32
UFD1-201ENST00000263202 ZNF530Q6P9A1 599 aaPredicted RBP29.54■■■□□ 2.32
UFD1-201ENST00000263202 SUPT16HQ9Y5B9 1047 aaKnown RBP29.54■■■□□ 2.32
UFD1-201ENST00000263202 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.53■■■□□ 2.32
UFD1-201ENST00000263202 OVOS2A0A0G2JMS6 1433 aa29.53■■■□□ 2.32
UFD1-201ENST00000263202 FANCIQ9NVI1 1328 aa29.53■■■□□ 2.32
UFD1-201ENST00000263202 AKAP4Q5JQC9 854 aa29.52■■■□□ 2.32
UFD1-201ENST00000263202 IFT57Q9NWB7 429 aa29.52■■■□□ 2.32
UFD1-201ENST00000263202 ZNF853P0CG23 659 aa29.52■■■□□ 2.32
UFD1-201ENST00000263202 TSR2Q969E8 191 aaKnown RBP29.52■■■□□ 2.32
UFD1-201ENST00000263202 RCAN3Q9UKA8 241 aa29.51■■■□□ 2.31
UFD1-201ENST00000263202 GNAI1P63096 354 aa29.5■■■□□ 2.31
UFD1-201ENST00000263202 SPG7Q9UQ90 795 aa29.5■■■□□ 2.31
UFD1-201ENST00000263202 WNK3Q9BYP7 1800 aa29.5■■■□□ 2.31
UFD1-201ENST00000263202 CFAP44Q96MT7 982 aa29.5■■■□□ 2.31
UFD1-201ENST00000263202 LAS1LQ9Y4W2 734 aaKnown RBP29.5■■■□□ 2.31
UFD1-201ENST00000263202 IL17REQ8NFR9 667 aa29.49■■■□□ 2.31
UFD1-201ENST00000263202 IL2RBP14784 551 aa29.48■■■□□ 2.31
UFD1-201ENST00000263202 C1orf141Q5JVX7 400 aa29.48■■■□□ 2.31
UFD1-201ENST00000263202 ADAMTS7Q9UKP4 1686 aa29.48■■■□□ 2.31
UFD1-201ENST00000263202 USP35Q9P2H5 1018 aa29.48■■■□□ 2.31
UFD1-201ENST00000263202 SHANK3Q9BYB0 1731 aa29.47■■■□□ 2.31
UFD1-201ENST00000263202 CEMIPQ8WUJ3 1361 aa29.46■■■□□ 2.31
UFD1-201ENST00000263202 C8orf37Q96NL8 207 aa29.46■■■□□ 2.31
UFD1-201ENST00000263202 SCN11AQ9UI33 1791 aa29.45■■■□□ 2.3
UFD1-201ENST00000263202 NGLY1Q96IV0 654 aa29.45■■■□□ 2.3
UFD1-201ENST00000263202 MBIPQ9NS73 344 aa29.45■■■□□ 2.3
UFD1-201ENST00000263202 LGR6Q9HBX8 967 aa29.43■■■□□ 2.3
UFD1-201ENST00000263202 DISP2A7MBM2 1401 aa29.43■■■□□ 2.3
UFD1-201ENST00000263202 CHL1O00533 1208 aa29.43■■■□□ 2.3
UFD1-201ENST00000263202 PHKG2P15735 406 aa29.43■■■□□ 2.3
UFD1-201ENST00000263202 EXOSC9Q06265 439 aaKnown RBP29.43■■■□□ 2.3
UFD1-201ENST00000263202 RNF123Q5XPI4 1314 aa29.43■■■□□ 2.3
UFD1-201ENST00000263202 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.42■■■□□ 2.3
UFD1-201ENST00000263202 BCL9LQ86UU0 1499 aa29.42■■■□□ 2.3
UFD1-201ENST00000263202 MPRIPQ6WCQ1 1025 aa29.42■■■□□ 2.3
UFD1-201ENST00000263202 FNBP4Q8N3X1 1017 aaPredicted RBP29.42■■■□□ 2.3
UFD1-201ENST00000263202 UNC5CLQ8IV45 518 aa29.41■■■□□ 2.3
UFD1-201ENST00000263202 IFNL2Q8IZJ0 200 aa29.41■■■□□ 2.3
UFD1-201ENST00000263202 ZCRB1Q8TBF4 217 aaKnown RBP29.41■■■□□ 2.3
UFD1-201ENST00000263202 SPATA31A1Q5TZJ5 1347 aa29.41■■■□□ 2.3
UFD1-201ENST00000263202 CYP27B1O15528 508 aa29.41■■■□□ 2.3
UFD1-201ENST00000263202 RNMTO43148 476 aaKnown RBP29.41■■■□□ 2.3
UFD1-201ENST00000263202 SIPA1L3O60292 1781 aaPredicted RBP29.4■■■□□ 2.3
UFD1-201ENST00000263202 GTF3C3Q9Y5Q9 886 aa29.4■■■□□ 2.3
UFD1-201ENST00000263202 SPATA31A5Q5VU36 1347 aa29.38■■■□□ 2.29
UFD1-201ENST00000263202 SPATA31A7Q8IWB4 1347 aa29.38■■■□□ 2.29
UFD1-201ENST00000263202 PCDH11XQ9BZA7 1347 aa29.38■■■□□ 2.29
UFD1-201ENST00000263202 PCDH11YQ9BZA8 1340 aa29.38■■■□□ 2.29
UFD1-201ENST00000263202 KDM6AO15550 1401 aaPredicted RBP29.37■■■□□ 2.29
UFD1-201ENST00000263202 CT47B1P0C2W7 299 aaPredicted RBP29.37■■■□□ 2.29
UFD1-201ENST00000263202 THRAP3Q9Y2W1 955 aaKnown RBP29.37■■■□□ 2.29
UFD1-201ENST00000263202 TAF7Q15545 349 aaPredicted RBP29.36■■■□□ 2.29
UFD1-201ENST00000263202 MEX3CQ5U5Q3 659 aaKnown RBP29.36■■■□□ 2.29
UFD1-201ENST00000263202 MIS18AQ9NYP9 233 aa29.35■■■□□ 2.29
UFD1-201ENST00000263202 KDM3BQ7LBC6 1761 aa29.35■■■□□ 2.29
UFD1-201ENST00000263202 BABAM1Q9NWV8 329 aa29.34■■■□□ 2.29
UFD1-201ENST00000263202 TSPYL4Q9UJ04 414 aa29.34■■■□□ 2.29
UFD1-201ENST00000263202 HSP90AB1P08238 724 aaKnown RBP29.33■■■□□ 2.29
UFD1-201ENST00000263202 TEFQ10587 303 aa29.33■■■□□ 2.29
UFD1-201ENST00000263202 VPS72Q15906 364 aa29.33■■■□□ 2.29
UFD1-201ENST00000263202 USP21Q9UK80 565 aa29.33■■■□□ 2.29
UFD1-201ENST00000263202 RRP1P56182 461 aaKnown RBP29.32■■■□□ 2.28
UFD1-201ENST00000263202 DCAF5Q96JK2 942 aa29.32■■■□□ 2.28
UFD1-201ENST00000263202 CCDC9Q9Y3X0 531 aaKnown RBP29.32■■■□□ 2.28
UFD1-201ENST00000263202 NEFLP07196 543 aa29.31■■■□□ 2.28
UFD1-201ENST00000263202 RARSP54136 660 aaKnown RBP29.31■■■□□ 2.28
UFD1-201ENST00000263202 CDCA7Q9BWT1 371 aaPredicted RBP29.31■■■□□ 2.28
UFD1-201ENST00000263202 C8orf58Q8NAV2 365 aa29.3■■■□□ 2.28
UFD1-201ENST00000263202 MRC1P22897 1456 aa29.3■■■□□ 2.28
UFD1-201ENST00000263202 BARGINQ6ZT62 677 aa29.29■■■□□ 2.28
UFD1-201ENST00000263202 TSPYL6Q8N831 410 aa29.29■■■□□ 2.28
UFD1-201ENST00000263202 DDX54Q8TDD1 881 aaKnown RBP29.29■■■□□ 2.28
UFD1-201ENST00000263202 BCAR3O75815 825 aa29.29■■■□□ 2.28
UFD1-201ENST00000263202 NKX1-1Q15270 411 aaPredicted RBP29.29■■■□□ 2.28
UFD1-201ENST00000263202 AFF2P51816 1311 aa29.28■■■□□ 2.28
UFD1-201ENST00000263202 TNS2Q63HR2 1409 aa29.27■■■□□ 2.28
UFD1-201ENST00000263202 VAMP4O75379 141 aa29.27■■■□□ 2.28
UFD1-201ENST00000263202 TWISTNBQ3B726 338 aaPredicted RBP29.27■■■□□ 2.28
UFD1-201ENST00000263202 EXOC5O00471 708 aa29.26■■■□□ 2.27
UFD1-201ENST00000263202 IRX6P78412 446 aaPredicted RBP29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms