RNA–Protein interactions for RNA: ENST00000261438.9

KLF3-201, Transcript of Kruppel like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLF3, Length 5,122 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF3-201ENST00000261438 CWC27Q6UX04 472 aaKnown RBP20.46■□□□□ 0.87
KLF3-201ENST00000261438 PPFIBP1Q86W92 1011 aa20.46■□□□□ 0.87
KLF3-201ENST00000261438 DDX58O95786 925 aaKnown RBP20.45■□□□□ 0.87
KLF3-201ENST00000261438 BRPF1P55201 1214 aaPredicted RBP20.45■□□□□ 0.87
KLF3-201ENST00000261438 OGFRQ9NZT2 677 aa20.45■□□□□ 0.87
KLF3-201ENST00000261438 PRDM2Q13029 1718 aa20.45■□□□□ 0.86
KLF3-201ENST00000261438 SMTNL1A8MU46 457 aa20.45■□□□□ 0.86
KLF3-201ENST00000261438 PARD3Q8TEW0 1356 aa20.45■□□□□ 0.86
KLF3-201ENST00000261438 RBSNQ9H1K0 784 aa20.45■□□□□ 0.86
KLF3-201ENST00000261438 GIMAP6Q6P9H5 292 aa20.44■□□□□ 0.86
KLF3-201ENST00000261438 FAM177BA6PVY3 158 aa20.44■□□□□ 0.86
KLF3-201ENST00000261438 ANO10Q9NW15 660 aa20.44■□□□□ 0.86
KLF3-201ENST00000261438 EXOC6BQ9Y2D4 811 aa20.44■□□□□ 0.86
KLF3-201ENST00000261438 ZSCAN12O43309 604 aa20.44■□□□□ 0.86
KLF3-201ENST00000261438 AQRO60306 1485 aaKnown RBP eCLIP20.44■□□□□ 0.866e-8■■■■■ 36.2
KLF3-201ENST00000261438 IL1RAPL2Q9NP60 686 aa20.43■□□□□ 0.86
KLF3-201ENST00000261438 TMX3Q96JJ7 454 aa20.43■□□□□ 0.86
KLF3-201ENST00000261438 GBP3Q9H0R5 595 aa20.43■□□□□ 0.86
KLF3-201ENST00000261438 NSD3Q9BZ95 1437 aa20.43■□□□□ 0.86
KLF3-201ENST00000261438 JMYQ8N9B5 988 aa20.43■□□□□ 0.86
KLF3-201ENST00000261438 MX1P20591 662 aa20.43■□□□□ 0.86
KLF3-201ENST00000261438 STX6O43752 255 aa20.42■□□□□ 0.86
KLF3-201ENST00000261438 TXLNBQ8N3L3 684 aa20.42■□□□□ 0.86
KLF3-201ENST00000261438 GPATCH11Q8N954 259 aa20.42■□□□□ 0.86
KLF3-201ENST00000261438 DDX19AQ9NUU7 478 aaKnown RBP20.42■□□□□ 0.86
KLF3-201ENST00000261438 PTPRGP23470 1445 aa20.42■□□□□ 0.86
KLF3-201ENST00000261438 LIMCH1Q9UPQ0 1083 aa20.42■□□□□ 0.86
KLF3-201ENST00000261438 FCHSD2O94868 740 aa20.42■□□□□ 0.86
KLF3-201ENST00000261438 CFAP100Q494V2 611 aa20.42■□□□□ 0.86
KLF3-201ENST00000261438 CCDC186Q7Z3E2 898 aa20.42■□□□□ 0.86
KLF3-201ENST00000261438 ZNF165P49910 485 aa20.42■□□□□ 0.86
KLF3-201ENST00000261438 FAM193AP78312 1265 aa20.41■□□□□ 0.86
KLF3-201ENST00000261438 NCAPD3P42695 1498 aa20.41■□□□□ 0.86
KLF3-201ENST00000261438 DHX16O60231 1041 aaKnown RBP20.41■□□□□ 0.86
KLF3-201ENST00000261438 CSB-PGBD3P0DP91 1061 aa20.41■□□□□ 0.86
KLF3-201ENST00000261438 SNW1Q13573 536 aaKnown RBP20.41■□□□□ 0.86
KLF3-201ENST00000261438 MYRIPQ8NFW9 859 aa20.41■□□□□ 0.86
KLF3-201ENST00000261438 C1orf141Q5JVX7 400 aa20.41■□□□□ 0.86
KLF3-201ENST00000261438 CCDC171Q6TFL3 1326 aa20.41■□□□□ 0.86
KLF3-201ENST00000261438 LMAN1P49257 510 aa20.41■□□□□ 0.86
KLF3-201ENST00000261438 GSDMDP57764 484 aa20.41■□□□□ 0.86
KLF3-201ENST00000261438 GIMAP7Q8NHV1 300 aa20.41■□□□□ 0.86
KLF3-201ENST00000261438 TTC22Q5TAA0 569 aa20.41■□□□□ 0.86
KLF3-201ENST00000261438 USP48Q86UV5 1035 aa20.4■□□□□ 0.86
KLF3-201ENST00000261438 ERC1Q8IUD2 1116 aa20.4■□□□□ 0.86
KLF3-201ENST00000261438 SH2B1Q9NRF2 756 aaPredicted RBP20.4■□□□□ 0.86
KLF3-201ENST00000261438 ABCC11Q96J66 1382 aa20.4■□□□□ 0.86
KLF3-201ENST00000261438 DISP3Q9P2K9 1392 aa20.4■□□□□ 0.86
KLF3-201ENST00000261438 MARCH6O60337 910 aa20.39■□□□□ 0.85
KLF3-201ENST00000261438 CASQ1P31415 396 aa20.39■□□□□ 0.85
KLF3-201ENST00000261438 GTF2A1P52655 376 aaPredicted RBP20.39■□□□□ 0.85
KLF3-201ENST00000261438 NEUROD6Q96NK8 337 aa20.39■□□□□ 0.85
KLF3-201ENST00000261438 IRX3P78415 501 aaPredicted RBP20.39■□□□□ 0.85
KLF3-201ENST00000261438 DACH1Q9UI36 760 aa20.39■□□□□ 0.85
KLF3-201ENST00000261438 JAKMIP3Q5VZ66 844 aa20.39■□□□□ 0.85
KLF3-201ENST00000261438 ABCC5O15440 1437 aa20.38■□□□□ 0.85
KLF3-201ENST00000261438 NFE2L2Q16236 605 aa20.38■□□□□ 0.85
KLF3-201ENST00000261438 PTPRKQ15262 1439 aa20.38■□□□□ 0.85
KLF3-201ENST00000261438 PLCD3Q8N3E9 789 aa20.38■□□□□ 0.85
KLF3-201ENST00000261438 ZNF397Q8NF99 534 aaPredicted RBP20.38■□□□□ 0.85
KLF3-201ENST00000261438 ZNF445P59923 1031 aa20.38■□□□□ 0.85
KLF3-201ENST00000261438 WASHC4Q2M389 1173 aa20.38■□□□□ 0.85
KLF3-201ENST00000261438 KDM4AO75164 1064 aa20.37■□□□□ 0.85
KLF3-201ENST00000261438 CENPHQ9H3R5 247 aa20.37■□□□□ 0.85
KLF3-201ENST00000261438 HECW1Q76N89 1606 aa20.37■□□□□ 0.85
KLF3-201ENST00000261438 CTAGE5O15320 804 aa20.37■□□□□ 0.85
KLF3-201ENST00000261438 THUMPD2Q9BTF0 503 aaKnown RBP20.37■□□□□ 0.85
KLF3-201ENST00000261438 RLBP1P12271 317 aa20.37■□□□□ 0.85
KLF3-201ENST00000261438 ARHGAP29Q52LW3 1261 aa20.37■□□□□ 0.85
KLF3-201ENST00000261438 NUTM1Q86Y26 1132 aa20.37■□□□□ 0.85
KLF3-201ENST00000261438 PRG4Q92954 1404 aaPredicted RBP20.36■□□□□ 0.85
KLF3-201ENST00000261438 FAM200AQ8TCP9 573 aa20.36■□□□□ 0.85
KLF3-201ENST00000261438 DDX11Q96FC9 970 aa20.36■□□□□ 0.85
KLF3-201ENST00000261438 CRACR2AQ9BSW2 395 aa20.36■□□□□ 0.85
KLF3-201ENST00000261438 ATP2B1P20020 1258 aa20.36■□□□□ 0.85
KLF3-201ENST00000261438 TNNQ9UQP3 1299 aa20.36■□□□□ 0.85
KLF3-201ENST00000261438 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.36■□□□□ 0.85
KLF3-201ENST00000261438 V9GYY5 206 aaPredicted RBP20.36■□□□□ 0.85
KLF3-201ENST00000261438 SHTN1A0MZ66 631 aa20.36■□□□□ 0.85
KLF3-201ENST00000261438 PRPF40BQ6NWY9 871 aaKnown RBP20.35■□□□□ 0.85
KLF3-201ENST00000261438 LARP6Q9BRS8 491 aaKnown RBP20.35■□□□□ 0.85
KLF3-201ENST00000261438 FAM107BQ9H098 131 aa20.35■□□□□ 0.85
KLF3-201ENST00000261438 CAVIN2O95810 425 aa20.35■□□□□ 0.85
KLF3-201ENST00000261438 RRP12Q5JTH9 1297 aaKnown RBP20.35■□□□□ 0.85
KLF3-201ENST00000261438 CNPY2Q9Y2B0 182 aa20.35■□□□□ 0.85
KLF3-201ENST00000261438 TROQ12816 1431 aaPredicted RBP20.35■□□□□ 0.85
KLF3-201ENST00000261438 ZSCAN22P10073 491 aaPredicted RBP20.35■□□□□ 0.85
KLF3-201ENST00000261438 FSD2A1L4K1 749 aa20.35■□□□□ 0.85
KLF3-201ENST00000261438 U2AF2P26368 475 aaKnown RBP eCLIP20.35■□□□□ 0.852e-6■■□□□ 11.5
KLF3-201ENST00000261438 ERICH2A1L162 156 aa20.34■□□□□ 0.85
KLF3-201ENST00000261438 PIP4K2AP48426 406 aaPredicted RBP20.34■□□□□ 0.85
KLF3-201ENST00000261438 GOLGA6L10A6NI86 522 aa20.34■□□□□ 0.85
KLF3-201ENST00000261438 GJB2P29033 226 aa20.34■□□□□ 0.85
KLF3-201ENST00000261438 TFIP11Q9UBB9 837 aaKnown RBP20.34■□□□□ 0.85
KLF3-201ENST00000261438 SRGAP3O43295 1099 aa20.34■□□□□ 0.85
KLF3-201ENST00000261438 SKILP12757 684 aa20.34■□□□□ 0.85
KLF3-201ENST00000261438 PPP1R9BQ96SB3 815 aa20.34■□□□□ 0.85
KLF3-201ENST00000261438 SLU7O95391 586 aaKnown RBP20.34■□□□□ 0.85
KLF3-201ENST00000261438 ZGPATQ8N5A5 531 aaKnown RBP20.33■□□□□ 0.85
KLF3-201ENST00000261438 PIBF1Q8WXW3 757 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms