RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 NWD2Q9ULI1 1742 aa22.8■■□□□ 1.24
SSB-201ENST00000260956 RRS1Q15050 365 aaKnown RBP22.8■■□□□ 1.24
SSB-201ENST00000260956 PNNQ9H307 717 aaKnown RBP22.8■■□□□ 1.24
SSB-201ENST00000260956 STRN4Q9NRL3 753 aa22.8■■□□□ 1.24
SSB-201ENST00000260956 MAP3K19Q56UN5 1328 aa22.8■■□□□ 1.24
SSB-201ENST00000260956 VPS72Q15906 364 aa22.79■■□□□ 1.24
SSB-201ENST00000260956 GJD4Q96KN9 370 aaPredicted RBP22.79■■□□□ 1.24
SSB-201ENST00000260956 EP400Q96L91 3159 aa22.79■■□□□ 1.24
SSB-201ENST00000260956 RXRBP28702 533 aa22.79■■□□□ 1.24
SSB-201ENST00000260956 PRKAR2BP31323 418 aa22.79■■□□□ 1.24
SSB-201ENST00000260956 LARP1Q6PKG0 1096 aaKnown RBP22.78■■□□□ 1.24
SSB-201ENST00000260956 SKAP1Q86WV1 359 aa22.78■■□□□ 1.24
SSB-201ENST00000260956 PANK1Q8TE04 598 aa22.78■■□□□ 1.24
SSB-201ENST00000260956 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.78■■□□□ 1.24
SSB-201ENST00000260956 RLBP1P12271 317 aa22.77■■□□□ 1.24
SSB-201ENST00000260956 RBM6P78332 1123 aaKnown RBP22.77■■□□□ 1.24
SSB-201ENST00000260956 TSR2Q969E8 191 aaKnown RBP22.77■■□□□ 1.24
SSB-201ENST00000260956 COL5A2P05997 1499 aaPredicted RBP22.77■■□□□ 1.24
SSB-201ENST00000260956 RIPK4P57078 832 aa22.77■■□□□ 1.23
SSB-201ENST00000260956 TNNQ9UQP3 1299 aa22.77■■□□□ 1.23
SSB-201ENST00000260956 GLI3P10071 1580 aa22.76■■□□□ 1.23
SSB-201ENST00000260956 PHACTR3Q96KR7 559 aa22.76■■□□□ 1.23
SSB-201ENST00000260956 BACH2Q9BYV9 841 aa22.76■■□□□ 1.23
SSB-201ENST00000260956 NFE2L2Q16236 605 aa22.75■■□□□ 1.23
SSB-201ENST00000260956 SPATA31A5Q5VU36 1347 aa22.75■■□□□ 1.23
SSB-201ENST00000260956 SPATA31A7Q8IWB4 1347 aa22.75■■□□□ 1.23
SSB-201ENST00000260956 PDE4AP27815 886 aa22.74■■□□□ 1.23
SSB-201ENST00000260956 EVA1CP58658 441 aa22.74■■□□□ 1.23
SSB-201ENST00000260956 EXOSC9Q06265 439 aaKnown RBP22.74■■□□□ 1.23
SSB-201ENST00000260956 CLUAP1Q96AJ1 413 aa22.74■■□□□ 1.23
SSB-201ENST00000260956 ANP32EQ9BTT0 268 aa22.74■■□□□ 1.23
SSB-201ENST00000260956 CCDC9Q9Y3X0 531 aaKnown RBP22.74■■□□□ 1.23
SSB-201ENST00000260956 LTN1O94822 1766 aa22.73■■□□□ 1.23
SSB-201ENST00000260956 RGPD5Q99666 1765 aa22.73■■□□□ 1.23
SSB-201ENST00000260956 AAMPQ13685 434 aa22.73■■□□□ 1.23
SSB-201ENST00000260956 IP6K1Q92551 441 aa22.73■■□□□ 1.23
SSB-201ENST00000260956 COG6Q9Y2V7 657 aa22.73■■□□□ 1.23
SSB-201ENST00000260956 USP35Q9P2H5 1018 aa22.72■■□□□ 1.23
SSB-201ENST00000260956 SPATA31A1Q5TZJ5 1347 aa22.72■■□□□ 1.23
SSB-201ENST00000260956 PPM1GO15355 546 aaPredicted RBP22.71■■□□□ 1.23
SSB-201ENST00000260956 HOXC9P31274 260 aa22.71■■□□□ 1.23
SSB-201ENST00000260956 VIRMAQ69YN4 1812 aaKnown RBP22.71■■□□□ 1.23
SSB-201ENST00000260956 RGS12O14924 1447 aa22.71■■□□□ 1.23
SSB-201ENST00000260956 BCL2L13Q9BXK5 485 aa22.71■■□□□ 1.23
SSB-201ENST00000260956 HMOX1P09601 288 aa22.7■■□□□ 1.22
SSB-201ENST00000260956 IGHDP01880 384 aa22.69■■□□□ 1.22
SSB-201ENST00000260956 HSP90AB2PQ58FF8 381 aa22.69■■□□□ 1.22
SSB-201ENST00000260956 ERBB3P21860 1342 aa22.69■■□□□ 1.22
SSB-201ENST00000260956 WDR17Q8IZU2 1322 aa22.69■■□□□ 1.22
SSB-201ENST00000260956 ONECUT3O60422 494 aaPredicted RBP22.68■■□□□ 1.22
SSB-201ENST00000260956 ZNF853P0CG23 659 aa22.68■■□□□ 1.22
SSB-201ENST00000260956 AMPHP49418 695 aa22.68■■□□□ 1.22
SSB-201ENST00000260956 FAM98CQ17RN3 349 aaKnown RBP22.68■■□□□ 1.22
SSB-201ENST00000260956 FRAT1Q92837 279 aaPredicted RBP22.68■■□□□ 1.22
SSB-201ENST00000260956 SSH1Q8WYL5 1049 aa22.68■■□□□ 1.22
SSB-201ENST00000260956 CANXP27824 592 aaKnown RBP22.67■■□□□ 1.22
SSB-201ENST00000260956 EIF4A2Q14240 407 aaKnown RBP22.67■■□□□ 1.22
SSB-201ENST00000260956 ANKRD24Q8TF21 1146 aa22.67■■□□□ 1.22
SSB-201ENST00000260956 LTV1Q96GA3 475 aaPredicted RBP22.67■■□□□ 1.22
SSB-201ENST00000260956 ABCC6O95255 1503 aa22.67■■□□□ 1.22
SSB-201ENST00000260956 CRB1P82279 1406 aa22.66■■□□□ 1.22
SSB-201ENST00000260956 TOM1L2Q6ZVM7 507 aa22.65■■□□□ 1.22
SSB-201ENST00000260956 BRPF1P55201 1214 aaPredicted RBP22.65■■□□□ 1.22
SSB-201ENST00000260956 ZKSCAN2Q63HK3 967 aa22.65■■□□□ 1.22
SSB-201ENST00000260956 CSB-PGBD3P0DP91 1061 aa22.64■■□□□ 1.21
SSB-201ENST00000260956 MVPQ14764 893 aaKnown RBP22.64■■□□□ 1.21
SSB-201ENST00000260956 SEPT12Q8IYM1 358 aa22.64■■□□□ 1.21
SSB-201ENST00000260956 PCDHB15Q9Y5E8 787 aa22.63■■□□□ 1.21
SSB-201ENST00000260956 RTL1A6NKG5 1358 aa22.63■■□□□ 1.21
SSB-201ENST00000260956 TRIM27P14373 513 aa22.62■■□□□ 1.21
SSB-201ENST00000260956 IFT57Q9NWB7 429 aa22.62■■□□□ 1.21
SSB-201ENST00000260956 FLT4P35916 1363 aa22.62■■□□□ 1.21
SSB-201ENST00000260956 ALDH1L2Q3SY69 923 aa22.62■■□□□ 1.21
SSB-201ENST00000260956 CARD10Q9BWT7 1032 aa22.62■■□□□ 1.21
SSB-201ENST00000260956 SMC4Q9NTJ3 1288 aa22.62■■□□□ 1.21
SSB-201ENST00000260956 THUMPD2Q9BTF0 503 aaKnown RBP22.61■■□□□ 1.21
SSB-201ENST00000260956 NLRP2Q9NX02 1062 aa22.61■■□□□ 1.21
SSB-201ENST00000260956 KDRP35968 1356 aa22.6■■□□□ 1.21
SSB-201ENST00000260956 C8orf34Q49A92 452 aa22.6■■□□□ 1.21
SSB-201ENST00000260956 AEBP1Q8IUX7 1158 aa22.6■■□□□ 1.21
SSB-201ENST00000260956 DZIP1LQ8IYY4 767 aaKnown RBP22.6■■□□□ 1.21
SSB-201ENST00000260956 ZNF428Q96B54 188 aa22.6■■□□□ 1.21
SSB-201ENST00000260956 BARGINQ6ZT62 677 aa22.6■■□□□ 1.21
SSB-201ENST00000260956 KIF24Q5T7B8 1368 aa22.59■■□□□ 1.21
SSB-201ENST00000260956 CALD1Q05682 793 aaKnown RBP22.59■■□□□ 1.21
SSB-201ENST00000260956 NBPF6Q5VWK0 638 aa22.59■■□□□ 1.21
SSB-201ENST00000260956 ATF7IPQ6VMQ6 1270 aa22.59■■□□□ 1.21
SSB-201ENST00000260956 NBPF4Q96M43 638 aa22.59■■□□□ 1.21
SSB-201ENST00000260956 LRRC37A3O60309 1634 aa22.58■■□□□ 1.21
SSB-201ENST00000260956 KIF16BQ96L93 1317 aa22.58■■□□□ 1.21
SSB-201ENST00000260956 NEFMP07197 916 aa22.58■■□□□ 1.21
SSB-201ENST00000260956 IPO9Q96P70 1041 aaKnown RBP22.58■■□□□ 1.21
SSB-201ENST00000260956 ANP32AP39687 249 aaKnown RBP22.57■■□□□ 1.2
SSB-201ENST00000260956 THSD7AQ9UPZ6 1657 aa22.57■■□□□ 1.2
SSB-201ENST00000260956 GNAI1P63096 354 aa22.57■■□□□ 1.2
SSB-201ENST00000260956 LMOD3Q0VAK6 560 aa22.57■■□□□ 1.2
SSB-201ENST00000260956 THRAP3Q9Y2W1 955 aaKnown RBP22.57■■□□□ 1.2
SSB-201ENST00000260956 A0A0G2JS52 829 aa22.56■■□□□ 1.2
SSB-201ENST00000260956 VAMP4O75379 141 aa22.56■■□□□ 1.2
SSB-201ENST00000260956 MYT1Q01538 1121 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms