RNA–Protein interactions for RNA: ENST00000260795.6

FGFR3-201, Transcript of fibroblast growth factor receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FGFR3, Length 4,132 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-201ENST00000260795 XRCC6P12956 609 aaKnown RBP eCLIP17.4■□□□□ 0.387e-8■□□□□ 10.6
FGFR3-201ENST00000260795 HDAC1Q13547 482 aaPredicted RBP17.4■□□□□ 0.38
FGFR3-201ENST00000260795 LRRC59Q96AG4 307 aaKnown RBP17.4■□□□□ 0.38
FGFR3-201ENST00000260795 SMC3Q9UQE7 1217 aa17.4■□□□□ 0.38
FGFR3-201ENST00000260795 IFT57Q9NWB7 429 aa17.4■□□□□ 0.38
FGFR3-201ENST00000260795 A0A1W2PP64 1363 aa17.39■□□□□ 0.38
FGFR3-201ENST00000260795 LTKP29376 864 aa17.39■□□□□ 0.37
FGFR3-201ENST00000260795 PPP6R1Q9UPN7 881 aa17.39■□□□□ 0.37
FGFR3-201ENST00000260795 NUCB1Q02818 461 aa17.39■□□□□ 0.37
FGFR3-201ENST00000260795 ATP7AQ04656 1500 aa17.39■□□□□ 0.37
FGFR3-201ENST00000260795 FOSBP53539 338 aa17.39■□□□□ 0.37
FGFR3-201ENST00000260795 BMP2KLQ5H9B9 411 aa17.39■□□□□ 0.37
FGFR3-201ENST00000260795 ABCC11Q96J66 1382 aa17.39■□□□□ 0.37
FGFR3-201ENST00000260795 RPAP2Q8IXW5 612 aaPredicted RBP17.38■□□□□ 0.37
FGFR3-201ENST00000260795 LRRCC1Q9C099 1032 aa17.38■□□□□ 0.37
FGFR3-201ENST00000260795 ZKSCAN1P17029 563 aaPredicted RBP17.38■□□□□ 0.37
FGFR3-201ENST00000260795 BCL11BQ9C0K0 894 aaPredicted RBP17.38■□□□□ 0.37
FGFR3-201ENST00000260795 ANKRD36BQ8N2N9 1353 aa17.38■□□□□ 0.37
FGFR3-201ENST00000260795 FIBPO43427 364 aa17.38■□□□□ 0.37
FGFR3-201ENST00000260795 JARID2Q92833 1246 aaPredicted RBP17.38■□□□□ 0.37
FGFR3-201ENST00000260795 CIZ1Q9ULV3 898 aaPredicted RBP17.38■□□□□ 0.37
FGFR3-201ENST00000260795 AEBP2Q6ZN18 517 aaPredicted RBP17.37■□□□□ 0.37
FGFR3-201ENST00000260795 UGGT1Q9NYU2 1555 aa17.37■□□□□ 0.37
FGFR3-201ENST00000260795 EIF4A2Q14240 407 aaKnown RBP17.37■□□□□ 0.37
FGFR3-201ENST00000260795 DDX17Q92841 729 aaKnown RBP17.37■□□□□ 0.37
FGFR3-201ENST00000260795 LARP6Q9BRS8 491 aaKnown RBP17.37■□□□□ 0.37
FGFR3-201ENST00000260795 ZBTB40Q9NUA8 1239 aa17.37■□□□□ 0.37
FGFR3-201ENST00000260795 MEX3CQ5U5Q3 659 aaKnown RBP17.37■□□□□ 0.37
FGFR3-201ENST00000260795 NUTM1Q86Y26 1132 aa17.37■□□□□ 0.37
FGFR3-201ENST00000260795 SRCIN1Q9C0H9 1055 aa17.37■□□□□ 0.37
FGFR3-201ENST00000260795 NPATQ14207 1427 aa17.37■□□□□ 0.37
FGFR3-201ENST00000260795 PPIP5K1Q6PFW1 1433 aa17.37■□□□□ 0.37
FGFR3-201ENST00000260795 PIP4K2AP48426 406 aaPredicted RBP17.36■□□□□ 0.37
FGFR3-201ENST00000260795 SRGAP3O43295 1099 aa17.36■□□□□ 0.37
FGFR3-201ENST00000260795 RBM10P98175 930 aaKnown RBP17.36■□□□□ 0.37
FGFR3-201ENST00000260795 PLA2R1Q13018 1463 aa17.36■□□□□ 0.37
FGFR3-201ENST00000260795 RUFY2Q8WXA3 655 aa17.35■□□□□ 0.37
FGFR3-201ENST00000260795 ORAI2Q96SN7 254 aa17.35■□□□□ 0.37
FGFR3-201ENST00000260795 ZNF521Q96K83 1311 aa17.35■□□□□ 0.37
FGFR3-201ENST00000260795 MEIS3Q99687 375 aa17.35■□□□□ 0.37
FGFR3-201ENST00000260795 ATP6V1DQ9Y5K8 247 aa17.35■□□□□ 0.37
FGFR3-201ENST00000260795 VAMP4O75379 141 aa17.35■□□□□ 0.37
FGFR3-201ENST00000260795 SMC5Q8IY18 1101 aa17.35■□□□□ 0.37
FGFR3-201ENST00000260795 TRIM35Q9UPQ4 493 aa17.35■□□□□ 0.37
FGFR3-201ENST00000260795 APPP05067 770 aa17.34■□□□□ 0.37
FGFR3-201ENST00000260795 CCT4P50991 539 aaKnown RBP17.34■□□□□ 0.37
FGFR3-201ENST00000260795 CLASRPQ8N2M8 674 aaKnown RBP17.34■□□□□ 0.37
FGFR3-201ENST00000260795 H3BQV1 296 aa17.34■□□□□ 0.37
FGFR3-201ENST00000260795 GNL2Q13823 731 aaKnown RBP17.34■□□□□ 0.37
FGFR3-201ENST00000260795 IFFO2Q5TF58 517 aa17.34■□□□□ 0.37
FGFR3-201ENST00000260795 SYCE3A1L190 88 aa17.33■□□□□ 0.37
FGFR3-201ENST00000260795 TAF7Q15545 349 aaPredicted RBP17.33■□□□□ 0.37
FGFR3-201ENST00000260795 KCNH5Q8NCM2 988 aa17.33■□□□□ 0.37
FGFR3-201ENST00000260795 FBXW7Q969H0 707 aa17.33■□□□□ 0.36
FGFR3-201ENST00000260795 GDPD2Q9HCC8 539 aa17.33■□□□□ 0.36
FGFR3-201ENST00000260795 SLC39A6Q13433 755 aa17.32■□□□□ 0.36
FGFR3-201ENST00000260795 CSPP1Q1MSJ5 1256 aa17.32■□□□□ 0.36
FGFR3-201ENST00000260795 FAM184AQ8NB25 1140 aa17.32■□□□□ 0.36
FGFR3-201ENST00000260795 UNC13BO14795 1591 aa17.32■□□□□ 0.36
FGFR3-201ENST00000260795 DNAJC2Q99543 621 aaKnown RBP17.32■□□□□ 0.36
FGFR3-201ENST00000260795 YTHDC2Q9H6S0 1430 aaKnown RBP17.32■□□□□ 0.36
FGFR3-201ENST00000260795 CWC27Q6UX04 472 aaKnown RBP17.32■□□□□ 0.36
FGFR3-201ENST00000260795 KDM4AO75164 1064 aa17.32■□□□□ 0.36
FGFR3-201ENST00000260795 CCDC173Q0VFZ6 552 aa17.31■□□□□ 0.36
FGFR3-201ENST00000260795 TRMT2AQ8IZ69 625 aaKnown RBP17.31■□□□□ 0.36
FGFR3-201ENST00000260795 MRPL50Q8N5N7 158 aaKnown RBP17.31■□□□□ 0.36
FGFR3-201ENST00000260795 SPG7Q9UQ90 795 aa17.31■□□□□ 0.36
FGFR3-201ENST00000260795 EIF2AK4Q9P2K8 1649 aaKnown RBP17.31■□□□□ 0.36
FGFR3-201ENST00000260795 NPC1L1Q9UHC9 1359 aa17.31■□□□□ 0.36
FGFR3-201ENST00000260795 NSD2O96028 1365 aa17.31■□□□□ 0.36
FGFR3-201ENST00000260795 IL16Q14005 1332 aa17.3■□□□□ 0.36
FGFR3-201ENST00000260795 BICD2Q8TD16 824 aa17.3■□□□□ 0.36
FGFR3-201ENST00000260795 BAG4O95429 457 aaKnown RBP17.3■□□□□ 0.36
FGFR3-201ENST00000260795 CNTROBQ8N137 903 aa17.3■□□□□ 0.36
FGFR3-201ENST00000260795 ANKRD24Q8TF21 1146 aa17.3■□□□□ 0.36
FGFR3-201ENST00000260795 CWC22Q9HCG8 908 aaKnown RBP17.3■□□□□ 0.36
FGFR3-201ENST00000260795 SDSP20132 328 aa17.3■□□□□ 0.36
FGFR3-201ENST00000260795 MTHFSDQ2M296 383 aaKnown RBP17.3■□□□□ 0.36
FGFR3-201ENST00000260795 GOLGA6L6A8MZA4 724 aa17.29■□□□□ 0.36
FGFR3-201ENST00000260795 RBM27Q9P2N5 1060 aaKnown RBP17.29■□□□□ 0.36
FGFR3-201ENST00000260795 MAP3K19Q56UN5 1328 aa17.29■□□□□ 0.36
FGFR3-201ENST00000260795 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.29■□□□□ 0.36
FGFR3-201ENST00000260795 PTPRTO14522 1441 aa17.29■□□□□ 0.36
FGFR3-201ENST00000260795 MBD3O95983 291 aa17.29■□□□□ 0.36
FGFR3-201ENST00000260795 EYA1Q99502 592 aa17.29■□□□□ 0.36
FGFR3-201ENST00000260795 SF3A1Q15459 793 aaKnown RBP17.28■□□□□ 0.36
FGFR3-201ENST00000260795 OTUD7AQ8TE49 926 aaPredicted RBP17.28■□□□□ 0.36
FGFR3-201ENST00000260795 RIMBP3CA6NJZ7 1639 aa17.28■□□□□ 0.36
FGFR3-201ENST00000260795 RIMBP3BA6NNM3 1639 aa17.28■□□□□ 0.36
FGFR3-201ENST00000260795 RIMBP3Q9UFD9 1639 aa17.28■□□□□ 0.36
FGFR3-201ENST00000260795 MX1P20591 662 aa17.28■□□□□ 0.36
FGFR3-201ENST00000260795 FSD1Q9BTV5 496 aa17.28■□□□□ 0.36
FGFR3-201ENST00000260795 LRRFIP2Q9Y608 721 aaKnown RBP17.28■□□□□ 0.36
FGFR3-201ENST00000260795 WASHC4Q2M389 1173 aa17.28■□□□□ 0.36
FGFR3-201ENST00000260795 INO80Q9ULG1 1556 aaPredicted RBP17.27■□□□□ 0.36
FGFR3-201ENST00000260795 HTATSF1O43719 755 aaKnown RBP17.27■□□□□ 0.36
FGFR3-201ENST00000260795 ZBTB7BO15156 539 aaPredicted RBP17.27■□□□□ 0.36
FGFR3-201ENST00000260795 HSP90AB4PQ58FF6 505 aa17.27■□□□□ 0.36
FGFR3-201ENST00000260795 TTC22Q5TAA0 569 aa17.27■□□□□ 0.36
FGFR3-201ENST00000260795 NRDCO43847 1150 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms