RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 SMC4Q9NTJ3 1288 aa35.56■■■■□ 3.28
CCM2-201ENST00000258781 ABCC6O95255 1503 aa35.56■■■■□ 3.28
CCM2-201ENST00000258781 AAMPQ13685 434 aa35.55■■■■□ 3.28
CCM2-201ENST00000258781 LAS1LQ9Y4W2 734 aaKnown RBP35.55■■■■□ 3.28
CCM2-201ENST00000258781 KDM2BQ8NHM5 1336 aa35.55■■■■□ 3.28
CCM2-201ENST00000258781 ALDH1L2Q3SY69 923 aa35.54■■■■□ 3.28
CCM2-201ENST00000258781 MS4A1P11836 297 aa35.54■■■■□ 3.28
CCM2-201ENST00000258781 ZKSCAN2Q63HK3 967 aa35.54■■■■□ 3.28
CCM2-201ENST00000258781 SSH1Q8WYL5 1049 aa35.54■■■■□ 3.28
CCM2-201ENST00000258781 ANKRD24Q8TF21 1146 aa35.53■■■■□ 3.28
CCM2-201ENST00000258781 CENPQQ7L2Z9 268 aaPredicted RBP35.52■■■■□ 3.28
CCM2-201ENST00000258781 RBM19Q9Y4C8 960 aaKnown RBP35.52■■■■□ 3.28
CCM2-201ENST00000258781 ERBB3P21860 1342 aa35.52■■■■□ 3.28
CCM2-201ENST00000258781 HAP1P54257 671 aaPredicted RBP35.52■■■■□ 3.28
CCM2-201ENST00000258781 NBPF6Q5VWK0 638 aa35.52■■■■□ 3.28
CCM2-201ENST00000258781 NBPF4Q96M43 638 aa35.52■■■■□ 3.28
CCM2-201ENST00000258781 MBIPQ9NS73 344 aa35.52■■■■□ 3.28
CCM2-201ENST00000258781 CAMTA1Q9Y6Y1 1673 aa35.51■■■■□ 3.28
CCM2-201ENST00000258781 FAM83GA6ND36 823 aa35.51■■■■□ 3.28
CCM2-201ENST00000258781 USHBP1Q8N6Y0 703 aa35.51■■■■□ 3.28
CCM2-201ENST00000258781 LMO7Q8WWI1 1683 aa35.51■■■■□ 3.27
CCM2-201ENST00000258781 COG6Q9Y2V7 657 aa35.5■■■■□ 3.27
CCM2-201ENST00000258781 KIF16BQ96L93 1317 aa35.48■■■■□ 3.27
CCM2-201ENST00000258781 PRDM11Q9NQV5 511 aa35.48■■■■□ 3.27
CCM2-201ENST00000258781 BRPF1P55201 1214 aaPredicted RBP35.47■■■■□ 3.27
CCM2-201ENST00000258781 GAS2L2Q8NHY3 880 aa35.47■■■■□ 3.27
CCM2-201ENST00000258781 RLBP1P12271 317 aa35.46■■■■□ 3.27
CCM2-201ENST00000258781 DCTN1Q14203 1278 aa35.46■■■■□ 3.27
CCM2-201ENST00000258781 CLUAP1Q96AJ1 413 aa35.46■■■■□ 3.27
CCM2-201ENST00000258781 NCAPD2Q15021 1401 aa35.45■■■■□ 3.27
CCM2-201ENST00000258781 MTHFSDQ2M296 383 aaKnown RBP35.45■■■■□ 3.27
CCM2-201ENST00000258781 DZIP1LQ8IYY4 767 aaKnown RBP35.43■■■■□ 3.26
CCM2-201ENST00000258781 TNNQ9UQP3 1299 aa35.43■■■■□ 3.26
CCM2-201ENST00000258781 VAMP4O75379 141 aa35.43■■■■□ 3.26
CCM2-201ENST00000258781 FAM208AQ9UK61 1670 aaKnown RBP35.43■■■■□ 3.26
CCM2-201ENST00000258781 TCERG1O14776 1098 aaKnown RBP35.42■■■■□ 3.26
CCM2-201ENST00000258781 CRB1P82279 1406 aa35.42■■■■□ 3.26
CCM2-201ENST00000258781 IPO8O15397 1037 aaKnown RBP35.41■■■■□ 3.26
CCM2-201ENST00000258781 ATF7IPQ6VMQ6 1270 aa35.41■■■■□ 3.26
CCM2-201ENST00000258781 LRRC37A3O60309 1634 aa35.41■■■■□ 3.26
CCM2-201ENST00000258781 FTSJ3Q8IY81 847 aaKnown RBP35.41■■■■□ 3.26
CCM2-201ENST00000258781 HTATSF1O43719 755 aaKnown RBP35.4■■■■□ 3.26
CCM2-201ENST00000258781 MVPQ14764 893 aaKnown RBP35.4■■■■□ 3.26
CCM2-201ENST00000258781 CHL1O00533 1208 aa35.39■■■■□ 3.26
CCM2-201ENST00000258781 TRIM27P14373 513 aa35.39■■■■□ 3.26
CCM2-201ENST00000258781 MCM10Q7L590 875 aa35.39■■■■□ 3.26
CCM2-201ENST00000258781 NOB1Q9ULX3 412 aaKnown RBP35.39■■■■□ 3.26
CCM2-201ENST00000258781 COL5A2P05997 1499 aaPredicted RBP35.37■■■■□ 3.25
CCM2-201ENST00000258781 TWISTNBQ3B726 338 aaPredicted RBP35.37■■■■□ 3.25
CCM2-201ENST00000258781 RTF1Q92541 710 aaKnown RBP35.37■■■■□ 3.25
CCM2-201ENST00000258781 TSPYL6Q8N831 410 aa35.37■■■■□ 3.25
CCM2-201ENST00000258781 C8orf58Q8NAV2 365 aa35.34■■■■□ 3.25
CCM2-201ENST00000258781 COL14A1Q05707 1796 aaKnown RBP35.33■■■■□ 3.25
CCM2-201ENST00000258781 CSB-PGBD3P0DP91 1061 aa35.33■■■■□ 3.25
CCM2-201ENST00000258781 MRPL50Q8N5N7 158 aaKnown RBP35.33■■■■□ 3.25
CCM2-201ENST00000258781 NLRP2Q9NX02 1062 aa35.33■■■■□ 3.25
CCM2-201ENST00000258781 ARHGAP45Q92619 1136 aa35.31■■■■□ 3.24
CCM2-201ENST00000258781 MAP3K5Q99683 1374 aa35.3■■■■□ 3.24
CCM2-201ENST00000258781 GNAT3A8MTJ3 354 aa35.29■■■■□ 3.24
CCM2-201ENST00000258781 DDX19BQ9UMR2 479 aa35.29■■■■□ 3.24
CCM2-201ENST00000258781 WDR17Q8IZU2 1322 aa35.28■■■■□ 3.24
CCM2-201ENST00000258781 ELL2O00472 640 aaPredicted RBP35.26■■■■□ 3.24
CCM2-201ENST00000258781 PLCH1Q4KWH8 1693 aa35.25■■■■□ 3.23
CCM2-201ENST00000258781 IGHDP01880 384 aa35.24■■■■□ 3.23
CCM2-201ENST00000258781 BTG4Q9NY30 223 aa35.24■■■■□ 3.23
CCM2-201ENST00000258781 MEGF6O75095 1541 aa35.23■■■■□ 3.23
CCM2-201ENST00000258781 ADAMTS2O95450 1211 aa35.23■■■■□ 3.23
CCM2-201ENST00000258781 ITPRIPQ8IWB1 547 aa35.23■■■■□ 3.23
CCM2-201ENST00000258781 STRN4Q9NRL3 753 aa35.23■■■■□ 3.23
CCM2-201ENST00000258781 JCADQ9P266 1359 aa35.23■■■■□ 3.23
CCM2-201ENST00000258781 TMEM57Q8N5G2 664 aa35.22■■■■□ 3.23
CCM2-201ENST00000258781 PCDHB15Q9Y5E8 787 aa35.22■■■■□ 3.23
CCM2-201ENST00000258781 NUTM2BA6NNL0 878 aaPredicted RBP35.22■■■■□ 3.23
CCM2-201ENST00000258781 NUTM2EB1AL46 878 aaPredicted RBP35.22■■■■□ 3.23
CCM2-201ENST00000258781 NUTM2AQ8IVF1 878 aaPredicted RBP35.22■■■■□ 3.23
CCM2-201ENST00000258781 LARP1Q6PKG0 1096 aaKnown RBP35.2■■■■□ 3.23
CCM2-201ENST00000258781 TOM1L2Q6ZVM7 507 aa35.2■■■■□ 3.23
CCM2-201ENST00000258781 TSPYL4Q9UJ04 414 aa35.2■■■■□ 3.22
CCM2-201ENST00000258781 BABAM1Q9NWV8 329 aa35.19■■■■□ 3.22
CCM2-201ENST00000258781 HSPA1LP34931 641 aa35.18■■■■□ 3.22
CCM2-201ENST00000258781 EVA1CP58658 441 aa35.16■■■■□ 3.22
CCM2-201ENST00000258781 RWDD1Q9H446 243 aaPredicted RBP35.16■■■■□ 3.22
CCM2-201ENST00000258781 ABCC4O15439 1325 aa35.16■■■■□ 3.22
CCM2-201ENST00000258781 NRAPQ86VF7 1730 aa35.16■■■■□ 3.22
CCM2-201ENST00000258781 RAPGEF4Q8WZA2 1011 aa35.16■■■■□ 3.22
CCM2-201ENST00000258781 API5Q9BZZ5 524 aaKnown RBP35.16■■■■□ 3.22
CCM2-201ENST00000258781 VIRMAQ69YN4 1812 aaKnown RBP35.15■■■■□ 3.22
CCM2-201ENST00000258781 IL17REQ8NFR9 667 aa35.15■■■■□ 3.22
CCM2-201ENST00000258781 KRT24Q2M2I5 525 aa35.14■■■■□ 3.22
CCM2-201ENST00000258781 PLEKHO1Q53GL0 409 aaPredicted RBP35.14■■■■□ 3.22
CCM2-201ENST00000258781 PKD1L3Q7Z443 1732 aa35.14■■■■□ 3.22
CCM2-201ENST00000258781 SKAP1Q86WV1 359 aa35.14■■■■□ 3.22
CCM2-201ENST00000258781 CHMP4BQ9H444 224 aaKnown RBP35.14■■■■□ 3.22
CCM2-201ENST00000258781 CEMIPQ8WUJ3 1361 aa35.13■■■■□ 3.21
CCM2-201ENST00000258781 AMOTQ4VCS5 1084 aa35.13■■■■□ 3.21
CCM2-201ENST00000258781 CARD10Q9BWT7 1032 aa35.13■■■■□ 3.21
CCM2-201ENST00000258781 PARP4Q9UKK3 1724 aaKnown RBP35.13■■■■□ 3.21
CCM2-201ENST00000258781 ZBTB40Q9NUA8 1239 aa35.12■■■■□ 3.21
CCM2-201ENST00000258781 ZNF530Q6P9A1 599 aaPredicted RBP35.12■■■■□ 3.21
CCM2-201ENST00000258781 MIS18AQ9NYP9 233 aa35.12■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms