RNA–Protein interactions for RNA: ENST00000254644.12

MRPL35-201, Transcript of mitochondrial ribosomal protein L35, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene MRPL35, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL35-201ENST00000254644 NBPF6Q5VWK0 638 aa18.22■□□□□ 0.51
MRPL35-201ENST00000254644 DDX54Q8TDD1 881 aaKnown RBP18.22■□□□□ 0.51
MRPL35-201ENST00000254644 NBPF4Q96M43 638 aa18.22■□□□□ 0.51
MRPL35-201ENST00000254644 CARD14Q9BXL6 1004 aa18.22■□□□□ 0.51
MRPL35-201ENST00000254644 ANKRD26Q9UPS8 1709 aa18.21■□□□□ 0.51
MRPL35-201ENST00000254644 NSD2O96028 1365 aa18.21■□□□□ 0.51
MRPL35-201ENST00000254644 INSRP06213 1382 aa18.2■□□□□ 0.5
MRPL35-201ENST00000254644 ZCRB1Q8TBF4 217 aaKnown RBP18.2■□□□□ 0.5
MRPL35-201ENST00000254644 MTFR1LQ9H019 292 aa18.2■□□□□ 0.5
MRPL35-201ENST00000254644 ATF5Q9Y2D1 282 aaPredicted RBP18.2■□□□□ 0.5
MRPL35-201ENST00000254644 CGNL1Q0VF96 1302 aa18.2■□□□□ 0.5
MRPL35-201ENST00000254644 ZNF827Q17R98 1081 aa18.19■□□□□ 0.5
MRPL35-201ENST00000254644 HSP90AB2PQ58FF8 381 aa18.19■□□□□ 0.5
MRPL35-201ENST00000254644 SLC27A3Q5K4L6 730 aa18.19■□□□□ 0.5
MRPL35-201ENST00000254644 AKT1S1Q96B36 256 aa18.19■□□□□ 0.5
MRPL35-201ENST00000254644 PRIM1P49642 420 aaKnown RBP18.18■□□□□ 0.5
MRPL35-201ENST00000254644 FLT4P35916 1363 aa18.17■□□□□ 0.5
MRPL35-201ENST00000254644 ITGB4P16144 1822 aa18.16■□□□□ 0.5
MRPL35-201ENST00000254644 CHD4Q14839 1912 aa18.16■□□□□ 0.5
MRPL35-201ENST00000254644 PKD1L3Q7Z443 1732 aa18.16■□□□□ 0.5
MRPL35-201ENST00000254644 NCAPD2Q15021 1401 aa18.15■□□□□ 0.5
MRPL35-201ENST00000254644 SMG6Q86US8 1419 aaKnown RBP18.15■□□□□ 0.5
MRPL35-201ENST00000254644 NSD3Q9BZ95 1437 aa18.15■□□□□ 0.5
MRPL35-201ENST00000254644 TAF1LQ8IZX4 1826 aa18.15■□□□□ 0.5
MRPL35-201ENST00000254644 SYT17Q9BSW7 474 aa18.15■□□□□ 0.5
MRPL35-201ENST00000254644 USHBP1Q8N6Y0 703 aa18.14■□□□□ 0.49
MRPL35-201ENST00000254644 YY1P25490 414 aa18.13■□□□□ 0.49
MRPL35-201ENST00000254644 SLC16A10Q8TF71 515 aa18.13■□□□□ 0.49
MRPL35-201ENST00000254644 RAPGEF4Q8WZA2 1011 aa18.13■□□□□ 0.49
MRPL35-201ENST00000254644 FHDC1Q9C0D6 1143 aaPredicted RBP18.13■□□□□ 0.49
MRPL35-201ENST00000254644 MAP3K5Q99683 1374 aa18.13■□□□□ 0.49
MRPL35-201ENST00000254644 TOGARAM1Q9Y4F4 1720 aa18.12■□□□□ 0.49
MRPL35-201ENST00000254644 SYTL4Q96C24 671 aaPredicted RBP18.12■□□□□ 0.49
MRPL35-201ENST00000254644 EMILIN1Q9Y6C2 1016 aa18.12■□□□□ 0.49
MRPL35-201ENST00000254644 PNPLA7Q6ZV29 1317 aa18.12■□□□□ 0.49
MRPL35-201ENST00000254644 UTRNP46939 3433 aa18.11■□□□□ 0.49
MRPL35-201ENST00000254644 DCAF8L1A6NGE4 600 aa18.11■□□□□ 0.49
MRPL35-201ENST00000254644 TATP17735 454 aaPredicted RBP18.11■□□□□ 0.49
MRPL35-201ENST00000254644 KCNQ4P56696 695 aa18.11■□□□□ 0.49
MRPL35-201ENST00000254644 C5P01031 1676 aa18.1■□□□□ 0.49
MRPL35-201ENST00000254644 WASHC2AQ641Q2 1341 aa18.1■□□□□ 0.49
MRPL35-201ENST00000254644 ARXQ96QS3 562 aa18.1■□□□□ 0.49
MRPL35-201ENST00000254644 PCDH11XQ9BZA7 1347 aa18.09■□□□□ 0.49
MRPL35-201ENST00000254644 PCDH11YQ9BZA8 1340 aa18.09■□□□□ 0.49
MRPL35-201ENST00000254644 CYP27B1O15528 508 aa18.09■□□□□ 0.49
MRPL35-201ENST00000254644 PCGF6Q9BYE7 350 aa18.08■□□□□ 0.48
MRPL35-201ENST00000254644 CCNL1Q9UK58 526 aaPredicted RBP18.07■□□□□ 0.48
MRPL35-201ENST00000254644 NKX1-1Q15270 411 aaPredicted RBP18.06■□□□□ 0.48
MRPL35-201ENST00000254644 TFCP2L1Q9NZI6 479 aa18.06■□□□□ 0.48
MRPL35-201ENST00000254644 POLKQ9UBT6 870 aa18.06■□□□□ 0.48
MRPL35-201ENST00000254644 EYA1Q99502 592 aa18.04■□□□□ 0.48
MRPL35-201ENST00000254644 UBR3Q6ZT12 1888 aa18.03■□□□□ 0.48
MRPL35-201ENST00000254644 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.03■□□□□ 0.48
MRPL35-201ENST00000254644 EIF4G2P78344 907 aaKnown RBP eCLIP18.02■□□□□ 0.48
MRPL35-201ENST00000254644 COL23A1Q86Y22 540 aaPredicted RBP18.02■□□□□ 0.48
MRPL35-201ENST00000254644 PALLDQ8WX93 1383 aa18.02■□□□□ 0.47
MRPL35-201ENST00000254644 C4BP0C0L5 1744 aa18.01■□□□□ 0.47
MRPL35-201ENST00000254644 PPM1GO15355 546 aaPredicted RBP18.01■□□□□ 0.47
MRPL35-201ENST00000254644 HSPA5P11021 654 aaKnown RBP18.01■□□□□ 0.47
MRPL35-201ENST00000254644 HMGB2P26583 209 aaKnown RBP18.01■□□□□ 0.47
MRPL35-201ENST00000254644 POLD1P28340 1107 aa18.01■□□□□ 0.47
MRPL35-201ENST00000254644 MPRIPQ6WCQ1 1025 aa18.01■□□□□ 0.47
MRPL35-201ENST00000254644 PLEKHG2Q9H7P9 1386 aa18.01■□□□□ 0.47
MRPL35-201ENST00000254644 SPG7Q9UQ90 795 aa18■□□□□ 0.47
MRPL35-201ENST00000254644 GOLGB1Q14789 3259 aaKnown RBP17.99■□□□□ 0.47
MRPL35-201ENST00000254644 PIGBQ92521 554 aa17.99■□□□□ 0.47
MRPL35-201ENST00000254644 EIF4A2Q14240 407 aaKnown RBP17.98■□□□□ 0.47
MRPL35-201ENST00000254644 SMARCC1Q92922 1105 aaPredicted RBP17.98■□□□□ 0.47
MRPL35-201ENST00000254644 PANK3Q9H999 370 aa17.98■□□□□ 0.47
MRPL35-201ENST00000254644 PHKG2P15735 406 aa17.96■□□□□ 0.47
MRPL35-201ENST00000254644 FLAD1Q8NFF5 587 aa17.96■□□□□ 0.47
MRPL35-201ENST00000254644 ZNF831Q5JPB2 1677 aa17.96■□□□□ 0.47
MRPL35-201ENST00000254644 IGSF1Q8N6C5 1336 aa17.96■□□□□ 0.46
MRPL35-201ENST00000254644 IFNL2Q8IZJ0 200 aa17.95■□□□□ 0.46
MRPL35-201ENST00000254644 ZNF784Q8NCA9 323 aaPredicted RBP17.95■□□□□ 0.46
MRPL35-201ENST00000254644 POLR3GLQ9BT43 218 aa17.95■□□□□ 0.46
MRPL35-201ENST00000254644 AMIGO3Q86WK7 504 aa17.94■□□□□ 0.46
MRPL35-201ENST00000254644 NLGN2Q8NFZ4 835 aa17.94■□□□□ 0.46
MRPL35-201ENST00000254644 TNNT2P45379 298 aaPredicted RBP17.93■□□□□ 0.46
MRPL35-201ENST00000254644 LOC102724428A0A0B4J2F2 783 aa17.92■□□□□ 0.46
MRPL35-201ENST00000254644 SIK1P57059 783 aa17.92■□□□□ 0.46
MRPL35-201ENST00000254644 ASAP1Q9ULH1 1129 aa17.92■□□□□ 0.46
MRPL35-201ENST00000254644 MSH5O43196 834 aa17.91■□□□□ 0.46
MRPL35-201ENST00000254644 GPR162Q16538 588 aa17.91■□□□□ 0.46
MRPL35-201ENST00000254644 CCER1Q8TC90 406 aaPredicted RBP17.91■□□□□ 0.46
MRPL35-201ENST00000254644 TMOD3Q9NYL9 352 aa17.91■□□□□ 0.46
MRPL35-201ENST00000254644 KLHL34Q8N239 644 aa17.9■□□□□ 0.46
MRPL35-201ENST00000254644 LINC00116Q8NCU8 138 aa17.9■□□□□ 0.46
MRPL35-201ENST00000254644 ATG3Q9NT62 314 aa17.9■□□□□ 0.46
MRPL35-201ENST00000254644 COL5A3P25940 1745 aaPredicted RBP17.89■□□□□ 0.46
MRPL35-201ENST00000254644 ITPK1Q13572 414 aa17.89■□□□□ 0.45
MRPL35-201ENST00000254644 MSL1Q68DK7 614 aa17.89■□□□□ 0.45
MRPL35-201ENST00000254644 CD2APQ9Y5K6 639 aa17.89■□□□□ 0.45
MRPL35-201ENST00000254644 MYH14Q7Z406 1995 aaKnown RBP17.89■□□□□ 0.45
MRPL35-201ENST00000254644 ERVV-2B6SEH9 535 aa17.88■□□□□ 0.45
MRPL35-201ENST00000254644 SSFA2P28290 1259 aa17.88■□□□□ 0.45
MRPL35-201ENST00000254644 AK7Q96M32 723 aa17.88■□□□□ 0.45
MRPL35-201ENST00000254644 VIRMAQ69YN4 1812 aaKnown RBP17.88■□□□□ 0.45
MRPL35-201ENST00000254644 KDRP35968 1356 aa17.88■□□□□ 0.45
MRPL35-201ENST00000254644 SCN11AQ9UI33 1791 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms