RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 CAMKK2Q96RR4 588 aa34.1■■■■□ 3.05
LSM7-201ENST00000252622 NHSQ6T4R5 1651 aa34.09■■■■□ 3.05
LSM7-201ENST00000252622 DDX54Q8TDD1 881 aaKnown RBP34.08■■■■□ 3.05
LSM7-201ENST00000252622 IGSF1Q8N6C5 1336 aa34.06■■■■□ 3.04
LSM7-201ENST00000252622 RGPD3A6NKT7 1758 aaPredicted RBP34.06■■■■□ 3.04
LSM7-201ENST00000252622 RGPD4Q7Z3J3 1758 aa34.06■■■■□ 3.04
LSM7-201ENST00000252622 EZH2Q15910 746 aaKnown RBP34.06■■■■□ 3.04
LSM7-201ENST00000252622 PKD1L3Q7Z443 1732 aa34.04■■■■□ 3.04
LSM7-201ENST00000252622 PLEKHG2Q9H7P9 1386 aa34.04■■■■□ 3.04
LSM7-201ENST00000252622 PTF1AQ7RTS3 328 aa34.04■■■■□ 3.04
LSM7-201ENST00000252622 RREB1Q92766 1687 aa34.03■■■■□ 3.04
LSM7-201ENST00000252622 MTHFSP49914 203 aa34.03■■■■□ 3.04
LSM7-201ENST00000252622 PCDH11XQ9BZA7 1347 aa34.03■■■■□ 3.04
LSM7-201ENST00000252622 PCDH11YQ9BZA8 1340 aa34.03■■■■□ 3.04
LSM7-201ENST00000252622 PLSCR1O15162 318 aa34.02■■■■□ 3.04
LSM7-201ENST00000252622 KCNQ2O43526 872 aa34■■■■□ 3.03
LSM7-201ENST00000252622 ACSBG1Q96GR2 724 aa34■■■■□ 3.03
LSM7-201ENST00000252622 IL13P35225 146 aa33.98■■■■□ 3.03
LSM7-201ENST00000252622 CNGB1Q14028 1251 aaPredicted RBP33.98■■■■□ 3.03
LSM7-201ENST00000252622 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.98■■■■□ 3.03
LSM7-201ENST00000252622 NUP188Q5SRE5 1749 aa33.96■■■■□ 3.03
LSM7-201ENST00000252622 DOT1LQ8TEK3 1739 aa33.96■■■■□ 3.03
LSM7-201ENST00000252622 SPG7Q9UQ90 795 aa33.95■■■■□ 3.03
LSM7-201ENST00000252622 CYP27B1O15528 508 aa33.93■■■■□ 3.02
LSM7-201ENST00000252622 BTAF1O14981 1849 aa33.93■■■■□ 3.02
LSM7-201ENST00000252622 KDRP35968 1356 aa33.92■■■■□ 3.02
LSM7-201ENST00000252622 COL3A1P02461 1466 aaPredicted RBP33.92■■■■□ 3.02
LSM7-201ENST00000252622 DIAPH1O60610 1272 aaKnown RBP33.88■■■■□ 3.01
LSM7-201ENST00000252622 AEBP1Q8IUX7 1158 aa33.88■■■■□ 3.01
LSM7-201ENST00000252622 PRIM1P49642 420 aaKnown RBP33.87■■■■□ 3.01
LSM7-201ENST00000252622 SULT6B1Q6IMI4 303 aa33.87■■■■□ 3.01
LSM7-201ENST00000252622 NKX1-1Q15270 411 aaPredicted RBP33.86■■■■□ 3.01
LSM7-201ENST00000252622 PROM2Q8N271 834 aa33.85■■■■□ 3.01
LSM7-201ENST00000252622 SYTL4Q96C24 671 aaPredicted RBP33.85■■■■□ 3.01
LSM7-201ENST00000252622 KAT6BQ8WYB5 2073 aa33.84■■■■□ 3.01
LSM7-201ENST00000252622 PPP2R1AP30153 589 aa33.84■■■■□ 3.01
LSM7-201ENST00000252622 TXNRD1Q16881 649 aa33.84■■■■□ 3.01
LSM7-201ENST00000252622 IFNL2Q8IZJ0 200 aa33.83■■■■□ 3.01
LSM7-201ENST00000252622 TOGARAM1Q9Y4F4 1720 aa33.82■■■■□ 3
LSM7-201ENST00000252622 PHKG2P15735 406 aa33.82■■■■□ 3
LSM7-201ENST00000252622 AMOTQ4VCS5 1084 aa33.82■■■■□ 3
LSM7-201ENST00000252622 PLEKHO1Q53GL0 409 aaPredicted RBP33.82■■■■□ 3
LSM7-201ENST00000252622 NBPF14Q5TI25 921 aa33.82■■■■□ 3
LSM7-201ENST00000252622 DDX10Q13206 875 aaKnown RBP33.8■■■■□ 3
LSM7-201ENST00000252622 CFAP53Q96M91 514 aa33.8■■■■□ 3
LSM7-201ENST00000252622 PSDA5PKW4 1024 aaPredicted RBP33.79■■■■□ 3
LSM7-201ENST00000252622 R3HDM1Q15032 1099 aaKnown RBP33.79■■■■□ 3
LSM7-201ENST00000252622 HMOX1P09601 288 aa33.74■■■□□ 2.99
LSM7-201ENST00000252622 ZNF530Q6P9A1 599 aaPredicted RBP33.74■■■□□ 2.99
LSM7-201ENST00000252622 HSP90AB1P08238 724 aaKnown RBP33.73■■■□□ 2.99
LSM7-201ENST00000252622 ITGB4P16144 1822 aa33.73■■■□□ 2.99
LSM7-201ENST00000252622 LY75O60449 1722 aa33.73■■■□□ 2.99
LSM7-201ENST00000252622 PAPPAQ13219 1627 aa33.72■■■□□ 2.99
LSM7-201ENST00000252622 ANO8Q9HCE9 1232 aaPredicted RBP33.72■■■□□ 2.99
LSM7-201ENST00000252622 SLC27A3Q5K4L6 730 aa33.71■■■□□ 2.99
LSM7-201ENST00000252622 MPRIPQ6WCQ1 1025 aa33.71■■■□□ 2.99
LSM7-201ENST00000252622 U2SURPO15042 1029 aaKnown RBP33.7■■■□□ 2.99
LSM7-201ENST00000252622 DCAF5Q96JK2 942 aa33.69■■■□□ 2.98
LSM7-201ENST00000252622 RALBP1Q15311 655 aa33.68■■■□□ 2.98
LSM7-201ENST00000252622 C1orf141Q5JVX7 400 aa33.68■■■□□ 2.98
LSM7-201ENST00000252622 LRRC4BQ9NT99 713 aa33.67■■■□□ 2.98
LSM7-201ENST00000252622 NUDCQ9Y266 331 aa33.67■■■□□ 2.98
LSM7-201ENST00000252622 KDM6AO15550 1401 aaPredicted RBP33.67■■■□□ 2.98
LSM7-201ENST00000252622 PIGBQ92521 554 aa33.66■■■□□ 2.98
LSM7-201ENST00000252622 STK32BQ9NY57 414 aa33.66■■■□□ 2.98
LSM7-201ENST00000252622 TMOD3Q9NYL9 352 aa33.66■■■□□ 2.98
LSM7-201ENST00000252622 PALLDQ8WX93 1383 aa33.64■■■□□ 2.98
LSM7-201ENST00000252622 ERVV-2B6SEH9 535 aa33.64■■■□□ 2.98
LSM7-201ENST00000252622 SMARCC1Q92922 1105 aaPredicted RBP33.64■■■□□ 2.98
LSM7-201ENST00000252622 SLC15A2Q16348 729 aa33.63■■■□□ 2.97
LSM7-201ENST00000252622 LRP5O75197 1615 aa33.63■■■□□ 2.97
LSM7-201ENST00000252622 AKAP4Q5JQC9 854 aa33.62■■■□□ 2.97
LSM7-201ENST00000252622 CCNL1Q9UK58 526 aaPredicted RBP33.61■■■□□ 2.97
LSM7-201ENST00000252622 MTHFSDQ2M296 383 aaKnown RBP33.59■■■□□ 2.97
LSM7-201ENST00000252622 RSPH6AQ9H0K4 717 aa33.58■■■□□ 2.97
LSM7-201ENST00000252622 CASZ1Q86V15 1759 aa33.57■■■□□ 2.96
LSM7-201ENST00000252622 U2AF1L5P0DN76 240 aaPredicted RBP33.56■■■□□ 2.96
LSM7-201ENST00000252622 U2AF1Q01081 240 aaKnown RBP eCLIP33.56■■■□□ 2.96
LSM7-201ENST00000252622 SCN11AQ9UI33 1791 aa33.56■■■□□ 2.96
LSM7-201ENST00000252622 KCNQ4P56696 695 aa33.55■■■□□ 2.96
LSM7-201ENST00000252622 ZNF827Q17R98 1081 aa33.55■■■□□ 2.96
LSM7-201ENST00000252622 AKT1S1Q96B36 256 aa33.55■■■□□ 2.96
LSM7-201ENST00000252622 ZNF316A6NFI3 1004 aaPredicted RBP33.54■■■□□ 2.96
LSM7-201ENST00000252622 HMGB2P26583 209 aaKnown RBP33.54■■■□□ 2.96
LSM7-201ENST00000252622 PRKAR2BP31323 418 aa33.54■■■□□ 2.96
LSM7-201ENST00000252622 CABP4P57796 275 aa33.54■■■□□ 2.96
LSM7-201ENST00000252622 MYBBP1AQ9BQG0 1328 aaKnown RBP33.53■■■□□ 2.96
LSM7-201ENST00000252622 ADAMTS7Q9UKP4 1686 aa33.53■■■□□ 2.96
LSM7-201ENST00000252622 GAS2L2Q8NHY3 880 aa33.53■■■□□ 2.96
LSM7-201ENST00000252622 ASAP1Q9ULH1 1129 aa33.53■■■□□ 2.96
LSM7-201ENST00000252622 SRCAPQ6ZRS2 3230 aa33.53■■■□□ 2.96
LSM7-201ENST00000252622 FCHSD2O94868 740 aa33.52■■■□□ 2.96
LSM7-201ENST00000252622 ATG3Q9NT62 314 aa33.52■■■□□ 2.96
LSM7-201ENST00000252622 MRC1P22897 1456 aa33.51■■■□□ 2.96
LSM7-201ENST00000252622 C5P01031 1676 aa33.51■■■□□ 2.95
LSM7-201ENST00000252622 QSER1Q2KHR3 1735 aa33.5■■■□□ 2.95
LSM7-201ENST00000252622 MAP3K5Q99683 1374 aa33.48■■■□□ 2.95
LSM7-201ENST00000252622 LOC102724428A0A0B4J2F2 783 aa33.48■■■□□ 2.95
LSM7-201ENST00000252622 RNMTO43148 476 aaKnown RBP33.48■■■□□ 2.95
LSM7-201ENST00000252622 SIK1P57059 783 aa33.48■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms