RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 CHMP4BQ9H444 224 aaKnown RBP27.35■■□□□ 1.97
CLN6-201ENST00000249806 NUCB1Q02818 461 aa27.35■■□□□ 1.97
CLN6-201ENST00000249806 KIAA0232Q92628 1395 aa27.34■■□□□ 1.97
CLN6-201ENST00000249806 ESCO1Q5FWF5 840 aa27.33■■□□□ 1.97
CLN6-201ENST00000249806 LNPKQ9C0E8 428 aa27.33■■□□□ 1.97
CLN6-201ENST00000249806 SIRT2Q8IXJ6 389 aa27.33■■□□□ 1.97
CLN6-201ENST00000249806 GAS2L2Q8NHY3 880 aa27.32■■□□□ 1.96
CLN6-201ENST00000249806 TSPYL4Q9UJ04 414 aa27.31■■□□□ 1.96
CLN6-201ENST00000249806 HAP1P54257 671 aaPredicted RBP27.31■■□□□ 1.96
CLN6-201ENST00000249806 KIF24Q5T7B8 1368 aa27.3■■□□□ 1.96
CLN6-201ENST00000249806 CHD1LQ86WJ1 897 aa27.3■■□□□ 1.96
CLN6-201ENST00000249806 PSME1Q06323 249 aa27.29■■□□□ 1.96
CLN6-201ENST00000249806 USP54Q70EL1 1684 aa27.29■■□□□ 1.96
CLN6-201ENST00000249806 ADGRL3Q9HAR2 1447 aa27.28■■□□□ 1.96
CLN6-201ENST00000249806 NWD1Q149M9 1564 aa27.28■■□□□ 1.96
CLN6-201ENST00000249806 ANKRD45Q5TZF3 282 aa27.28■■□□□ 1.96
CLN6-201ENST00000249806 RTL5Q5HYW3 569 aaPredicted RBP27.27■■□□□ 1.96
CLN6-201ENST00000249806 USHBP1Q8N6Y0 703 aa27.27■■□□□ 1.96
CLN6-201ENST00000249806 UPF2Q9HAU5 1272 aaKnown RBP27.27■■□□□ 1.96
CLN6-201ENST00000249806 RGS12O14924 1447 aa27.27■■□□□ 1.96
CLN6-201ENST00000249806 NPHP4O75161 1426 aaPredicted RBP27.27■■□□□ 1.96
CLN6-201ENST00000249806 SLC4A2P04920 1241 aa27.26■■□□□ 1.96
CLN6-201ENST00000249806 INTS3Q68E01 1043 aaKnown RBP27.26■■□□□ 1.96
CLN6-201ENST00000249806 GCC1Q96CN9 775 aa27.26■■□□□ 1.95
CLN6-201ENST00000249806 TBC1D32Q96NH3 1257 aa27.25■■□□□ 1.95
CLN6-201ENST00000249806 GNAT3A8MTJ3 354 aa27.25■■□□□ 1.95
CLN6-201ENST00000249806 LTN1O94822 1766 aa27.24■■□□□ 1.95
CLN6-201ENST00000249806 ORAI2Q96SN7 254 aa27.24■■□□□ 1.95
CLN6-201ENST00000249806 HTATSF1O43719 755 aaKnown RBP27.22■■□□□ 1.95
CLN6-201ENST00000249806 XPCQ01831 940 aaPredicted RBP27.22■■□□□ 1.95
CLN6-201ENST00000249806 PTPRCP08575 1304 aa27.22■■□□□ 1.95
CLN6-201ENST00000249806 ZBTB7CA1YPR0 619 aa27.21■■□□□ 1.95
CLN6-201ENST00000249806 IL17REQ8NFR9 667 aa27.21■■□□□ 1.95
CLN6-201ENST00000249806 IP6K1Q92551 441 aa27.21■■□□□ 1.95
CLN6-201ENST00000249806 G2E3Q7L622 706 aa27.21■■□□□ 1.95
CLN6-201ENST00000249806 PLEKHG5O94827 1062 aa27.2■■□□□ 1.95
CLN6-201ENST00000249806 MFAP1P55081 439 aaKnown RBP27.19■■□□□ 1.94
CLN6-201ENST00000249806 RTL1A6NKG5 1358 aa27.19■■□□□ 1.94
CLN6-201ENST00000249806 NFAT5O94916 1531 aa27.18■■□□□ 1.94
CLN6-201ENST00000249806 NBPF6Q5VWK0 638 aa27.18■■□□□ 1.94
CLN6-201ENST00000249806 NBPF4Q96M43 638 aa27.18■■□□□ 1.94
CLN6-201ENST00000249806 DEKP35659 375 aaKnown RBP27.17■■□□□ 1.94
CLN6-201ENST00000249806 MSH6P52701 1360 aa27.17■■□□□ 1.94
CLN6-201ENST00000249806 MAP3K5Q99683 1374 aa27.17■■□□□ 1.94
CLN6-201ENST00000249806 F6X3S4 739 aa27.16■■□□□ 1.94
CLN6-201ENST00000249806 KCNH5Q8NCM2 988 aa27.15■■□□□ 1.94
CLN6-201ENST00000249806 MEIS3Q99687 375 aa27.15■■□□□ 1.94
CLN6-201ENST00000249806 LRRC37A3O60309 1634 aa27.14■■□□□ 1.94
CLN6-201ENST00000249806 C22orf23Q9BZE7 217 aa27.14■■□□□ 1.94
CLN6-201ENST00000249806 BECN1Q14457 450 aa27.13■■□□□ 1.93
CLN6-201ENST00000249806 SLC4A10Q6U841 1118 aa27.13■■□□□ 1.93
CLN6-201ENST00000249806 NECTIN2Q92692 538 aa27.13■■□□□ 1.93
CLN6-201ENST00000249806 USP35Q9P2H5 1018 aa27.13■■□□□ 1.93
CLN6-201ENST00000249806 TAF7Q15545 349 aaPredicted RBP27.13■■□□□ 1.93
CLN6-201ENST00000249806 LMOD2Q6P5Q4 547 aa27.13■■□□□ 1.93
CLN6-201ENST00000249806 PROSER2Q86WR7 435 aaPredicted RBP27.13■■□□□ 1.93
CLN6-201ENST00000249806 DCTPP1Q9H773 170 aa27.13■■□□□ 1.93
CLN6-201ENST00000249806 BMP2KLQ5H9B9 411 aa27.12■■□□□ 1.93
CLN6-201ENST00000249806 ANKRD44Q8N8A2 993 aa27.12■■□□□ 1.93
CLN6-201ENST00000249806 LRRC59Q96AG4 307 aaKnown RBP27.12■■□□□ 1.93
CLN6-201ENST00000249806 ATP10DQ9P241 1426 aa27.12■■□□□ 1.93
CLN6-201ENST00000249806 NFKBIBQ15653 356 aa27.12■■□□□ 1.93
CLN6-201ENST00000249806 BCL11AQ9H165 835 aa27.12■■□□□ 1.93
CLN6-201ENST00000249806 GCP02774 474 aa27.11■■□□□ 1.93
CLN6-201ENST00000249806 CEP85Q6P2H3 762 aa27.11■■□□□ 1.93
CLN6-201ENST00000249806 STK31Q9BXU1 1019 aa27.1■■□□□ 1.93
CLN6-201ENST00000249806 RPAP2Q8IXW5 612 aaPredicted RBP27.09■■□□□ 1.93
CLN6-201ENST00000249806 RGPD2P0DJD1 1756 aa27.09■■□□□ 1.93
CLN6-201ENST00000249806 CCDC30Q5VVM6 783 aa27.08■■□□□ 1.93
CLN6-201ENST00000249806 TBC1D2Q9BYX2 928 aa27.08■■□□□ 1.93
CLN6-201ENST00000249806 LGR6Q9HBX8 967 aa27.07■■□□□ 1.92
CLN6-201ENST00000249806 FLIIQ13045 1269 aa27.06■■□□□ 1.92
CLN6-201ENST00000249806 ARHGEF25Q86VW2 580 aa27.06■■□□□ 1.92
CLN6-201ENST00000249806 C16orf71Q8IYS4 520 aaPredicted RBP27.05■■□□□ 1.92
CLN6-201ENST00000249806 CCT4P50991 539 aaKnown RBP27.05■■□□□ 1.92
CLN6-201ENST00000249806 KRT28Q7Z3Y7 464 aa27.05■■□□□ 1.92
CLN6-201ENST00000249806 FKBP5Q13451 457 aaPredicted RBP27.04■■□□□ 1.92
CLN6-201ENST00000249806 SLKQ9H2G2 1235 aaPredicted RBP27.04■■□□□ 1.92
CLN6-201ENST00000249806 BABAM1Q9NWV8 329 aa27.04■■□□□ 1.92
CLN6-201ENST00000249806 PLEKHM2Q8IWE5 1019 aa27.04■■□□□ 1.92
CLN6-201ENST00000249806 CEMIPQ8WUJ3 1361 aa27.03■■□□□ 1.92
CLN6-201ENST00000249806 C19orf44Q9H6X5 657 aa27.02■■□□□ 1.92
CLN6-201ENST00000249806 APBB1O00213 710 aa27.02■■□□□ 1.92
CLN6-201ENST00000249806 PHRF1Q9P1Y6 1649 aaKnown RBP27.01■■□□□ 1.91
CLN6-201ENST00000249806 FAM208AQ9UK61 1670 aaKnown RBP27.01■■□□□ 1.91
CLN6-201ENST00000249806 AXIN2Q9Y2T1 843 aa27.01■■□□□ 1.91
CLN6-201ENST00000249806 SMARCA5O60264 1052 aaPredicted RBP27■■□□□ 1.91
CLN6-201ENST00000249806 C1orf167Q5SNV9 1468 aa27■■□□□ 1.91
CLN6-201ENST00000249806 GSPT1P15170 499 aaKnown RBP27■■□□□ 1.91
CLN6-201ENST00000249806 TBC1D9Q6ZT07 1266 aa27■■□□□ 1.91
CLN6-201ENST00000249806 OTUD7AQ8TE49 926 aaPredicted RBP26.99■■□□□ 1.91
CLN6-201ENST00000249806 SLIT3O75094 1523 aa26.99■■□□□ 1.91
CLN6-201ENST00000249806 FRAT2O75474 233 aaPredicted RBP26.98■■□□□ 1.91
CLN6-201ENST00000249806 ZNF530Q6P9A1 599 aaPredicted RBP26.98■■□□□ 1.91
CLN6-201ENST00000249806 ANKRD24Q8TF21 1146 aa26.98■■□□□ 1.91
CLN6-201ENST00000249806 HDGFL1Q5TGJ6 251 aa26.98■■□□□ 1.91
CLN6-201ENST00000249806 MPRIPQ6WCQ1 1025 aa26.98■■□□□ 1.91
CLN6-201ENST00000249806 TRPM3Q9HCF6 1732 aaPredicted RBP26.98■■□□□ 1.91
CLN6-201ENST00000249806 CACNA1FO60840 1977 aa26.98■■□□□ 1.91
CLN6-201ENST00000249806 SOS1Q07889 1333 aaPredicted RBP26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms