RNA–Protein interactions for RNA: ENST00000245816.8

CLPP-201, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPP, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-201ENST00000245816 ZCRB1Q8TBF4 217 aaKnown RBP22.4■■□□□ 1.18
CLPP-201ENST00000245816 PTGER2P43116 358 aa22.39■■□□□ 1.17
CLPP-201ENST00000245816 PRIM1P49642 420 aaKnown RBP22.39■■□□□ 1.17
CLPP-201ENST00000245816 ZNF827Q17R98 1081 aa22.39■■□□□ 1.17
CLPP-201ENST00000245816 DOT1LQ8TEK3 1739 aa22.38■■□□□ 1.17
CLPP-201ENST00000245816 ZBTB7AO95365 584 aa22.38■■□□□ 1.17
CLPP-201ENST00000245816 KCNQ4P56696 695 aa22.38■■□□□ 1.17
CLPP-201ENST00000245816 SPON1Q9HCB6 807 aa22.38■■□□□ 1.17
CLPP-201ENST00000245816 KAT6BQ8WYB5 2073 aa22.38■■□□□ 1.17
CLPP-201ENST00000245816 FLT4P35916 1363 aa22.38■■□□□ 1.17
CLPP-201ENST00000245816 ANKRD26Q9UPS8 1709 aa22.37■■□□□ 1.17
CLPP-201ENST00000245816 NCAPD2Q15021 1401 aa22.36■■□□□ 1.17
CLPP-201ENST00000245816 POLR3GLQ9BT43 218 aa22.35■■□□□ 1.17
CLPP-201ENST00000245816 STK32BQ9NY57 414 aa22.35■■□□□ 1.17
CLPP-201ENST00000245816 POLKQ9UBT6 870 aa22.35■■□□□ 1.17
CLPP-201ENST00000245816 KIF24Q5T7B8 1368 aa22.35■■□□□ 1.17
CLPP-201ENST00000245816 SGIP1Q9BQI5 828 aa22.34■■□□□ 1.17
CLPP-201ENST00000245816 ATF5Q9Y2D1 282 aaPredicted RBP22.34■■□□□ 1.17
CLPP-201ENST00000245816 AKT1S1Q96B36 256 aa22.33■■□□□ 1.17
CLPP-201ENST00000245816 MAP2P11137 1827 aaKnown RBP22.33■■□□□ 1.16
CLPP-201ENST00000245816 WASHC2AQ641Q2 1341 aa22.32■■□□□ 1.16
CLPP-201ENST00000245816 CYP27B1O15528 508 aa22.32■■□□□ 1.16
CLPP-201ENST00000245816 PANK3Q9H999 370 aa22.32■■□□□ 1.16
CLPP-201ENST00000245816 LY75O60449 1722 aa22.31■■□□□ 1.16
CLPP-201ENST00000245816 SYTL4Q96C24 671 aaPredicted RBP22.3■■□□□ 1.16
CLPP-201ENST00000245816 EYA1Q99502 592 aa22.3■■□□□ 1.16
CLPP-201ENST00000245816 CGNL1Q0VF96 1302 aa22.3■■□□□ 1.16
CLPP-201ENST00000245816 TOGARAM1Q9Y4F4 1720 aa22.29■■□□□ 1.16
CLPP-201ENST00000245816 PPM1GO15355 546 aaPredicted RBP22.29■■□□□ 1.16
CLPP-201ENST00000245816 TATP17735 454 aaPredicted RBP22.29■■□□□ 1.16
CLPP-201ENST00000245816 SMG6Q86US8 1419 aaKnown RBP22.29■■□□□ 1.16
CLPP-201ENST00000245816 RAPGEF4Q8WZA2 1011 aa22.28■■□□□ 1.16
CLPP-201ENST00000245816 TUBGCP6Q96RT7 1819 aa22.28■■□□□ 1.16
CLPP-201ENST00000245816 TNNT2P45379 298 aaPredicted RBP22.27■■□□□ 1.16
CLPP-201ENST00000245816 PKD1L3Q7Z443 1732 aa22.27■■□□□ 1.16
CLPP-201ENST00000245816 PNPLA7Q6ZV29 1317 aa22.26■■□□□ 1.15
CLPP-201ENST00000245816 EIF4A2Q14240 407 aaKnown RBP22.25■■□□□ 1.15
CLPP-201ENST00000245816 SLC27A3Q5K4L6 730 aa22.25■■□□□ 1.15
CLPP-201ENST00000245816 MTFR1LQ9H019 292 aa22.24■■□□□ 1.15
CLPP-201ENST00000245816 PPP1R1BQ9UD71 204 aaPredicted RBP22.24■■□□□ 1.15
CLPP-201ENST00000245816 UTRNP46939 3433 aa22.24■■□□□ 1.15
CLPP-201ENST00000245816 PCDH11XQ9BZA7 1347 aa22.22■■□□□ 1.15
CLPP-201ENST00000245816 PCDH11YQ9BZA8 1340 aa22.22■■□□□ 1.15
CLPP-201ENST00000245816 QSER1Q2KHR3 1735 aa22.22■■□□□ 1.15
CLPP-201ENST00000245816 NKX1-1Q15270 411 aaPredicted RBP22.21■■□□□ 1.15
CLPP-201ENST00000245816 ITGB4P16144 1822 aa22.21■■□□□ 1.15
CLPP-201ENST00000245816 COL24A1Q17RW2 1714 aa22.2■■□□□ 1.14
CLPP-201ENST00000245816 FHDC1Q9C0D6 1143 aaPredicted RBP22.2■■□□□ 1.14
CLPP-201ENST00000245816 AMIGO3Q86WK7 504 aa22.19■■□□□ 1.14
CLPP-201ENST00000245816 CCNL1Q9UK58 526 aaPredicted RBP22.19■■□□□ 1.14
CLPP-201ENST00000245816 KIF7Q2M1P5 1343 aa22.19■■□□□ 1.14
CLPP-201ENST00000245816 MPRIPQ6WCQ1 1025 aa22.18■■□□□ 1.14
CLPP-201ENST00000245816 PIGBQ92521 554 aa22.18■■□□□ 1.14
CLPP-201ENST00000245816 SYT17Q9BSW7 474 aa22.18■■□□□ 1.14
CLPP-201ENST00000245816 AMER1Q5JTC6 1135 aaPredicted RBP22.17■■□□□ 1.14
CLPP-201ENST00000245816 IGSF1Q8N6C5 1336 aa22.16■■□□□ 1.14
CLPP-201ENST00000245816 SMIM5Q71RC9 77 aa22.15■■□□□ 1.14
CLPP-201ENST00000245816 COL23A1Q86Y22 540 aaPredicted RBP22.15■■□□□ 1.14
CLPP-201ENST00000245816 PALLDQ8WX93 1383 aa22.14■■□□□ 1.14
CLPP-201ENST00000245816 PER1O15534 1290 aaPredicted RBP22.14■■□□□ 1.13
CLPP-201ENST00000245816 PHKG2P15735 406 aa22.14■■□□□ 1.13
CLPP-201ENST00000245816 ARXQ96QS3 562 aa22.14■■□□□ 1.13
CLPP-201ENST00000245816 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.14■■□□□ 1.13
CLPP-201ENST00000245816 TFCP2L1Q9NZI6 479 aa22.14■■□□□ 1.13
CLPP-201ENST00000245816 TAF1LQ8IZX4 1826 aa22.14■■□□□ 1.13
CLPP-201ENST00000245816 AEBP1Q8IUX7 1158 aa22.13■■□□□ 1.13
CLPP-201ENST00000245816 C5P01031 1676 aa22.13■■□□□ 1.13
CLPP-201ENST00000245816 SPG7Q9UQ90 795 aa22.12■■□□□ 1.13
CLPP-201ENST00000245816 ZEB1P37275 1124 aaPredicted RBP22.11■■□□□ 1.13
CLPP-201ENST00000245816 MORC1Q86VD1 984 aa22.11■■□□□ 1.13
CLPP-201ENST00000245816 SLC16A10Q8TF71 515 aa22.1■■□□□ 1.13
CLPP-201ENST00000245816 ASAP1Q9ULH1 1129 aa22.1■■□□□ 1.13
CLPP-201ENST00000245816 IL13P35225 146 aa22.08■■□□□ 1.13
CLPP-201ENST00000245816 ITPK1Q13572 414 aa22.08■■□□□ 1.13
CLPP-201ENST00000245816 IFNL2Q8IZJ0 200 aa22.08■■□□□ 1.13
CLPP-201ENST00000245816 MAP3K5Q99683 1374 aa22.08■■□□□ 1.12
CLPP-201ENST00000245816 LINC00116Q8NCU8 138 aa22.07■■□□□ 1.12
CLPP-201ENST00000245816 SLC4A9Q96Q91 983 aa22.07■■□□□ 1.12
CLPP-201ENST00000245816 ATG3Q9NT62 314 aa22.07■■□□□ 1.12
CLPP-201ENST00000245816 KNSTRNQ9Y448 316 aa22.07■■□□□ 1.12
CLPP-201ENST00000245816 KDM6AO15550 1401 aaPredicted RBP22.06■■□□□ 1.12
CLPP-201ENST00000245816 C4BP0C0L5 1744 aa22.06■■□□□ 1.12
CLPP-201ENST00000245816 GOLGB1Q14789 3259 aaKnown RBP22.06■■□□□ 1.12
CLPP-201ENST00000245816 YY1P25490 414 aa22.05■■□□□ 1.12
CLPP-201ENST00000245816 MSL1Q68DK7 614 aa22.04■■□□□ 1.12
CLPP-201ENST00000245816 NLGN2Q8NFZ4 835 aa22.04■■□□□ 1.12
CLPP-201ENST00000245816 UBR3Q6ZT12 1888 aa22.03■■□□□ 1.12
CLPP-201ENST00000245816 LOC102724428A0A0B4J2F2 783 aa22.03■■□□□ 1.12
CLPP-201ENST00000245816 SIK1P57059 783 aa22.03■■□□□ 1.12
CLPP-201ENST00000245816 SMARCC1Q92922 1105 aaPredicted RBP22.03■■□□□ 1.12
CLPP-201ENST00000245816 KDRP35968 1356 aa22.02■■□□□ 1.12
CLPP-201ENST00000245816 TMOD3Q9NYL9 352 aa22.02■■□□□ 1.12
CLPP-201ENST00000245816 PLEKHG2Q9H7P9 1386 aa22.01■■□□□ 1.11
CLPP-201ENST00000245816 SULT6B1Q6IMI4 303 aa22.01■■□□□ 1.11
CLPP-201ENST00000245816 MTHFSP49914 203 aa22■■□□□ 1.11
CLPP-201ENST00000245816 MSH5O43196 834 aa21.99■■□□□ 1.11
CLPP-201ENST00000245816 ZNF530Q6P9A1 599 aaPredicted RBP21.99■■□□□ 1.11
CLPP-201ENST00000245816 PLEKHO1Q53GL0 409 aaPredicted RBP21.98■■□□□ 1.11
CLPP-201ENST00000245816 CC2D1BQ5T0F9 858 aaKnown RBP21.98■■□□□ 1.11
CLPP-201ENST00000245816 ERVV-2B6SEH9 535 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms