RNA–Protein interactions for RNA: ENST00000236850.4

APOA1-201, Transcript of apolipoprotein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOA1, Length 1,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-201ENST00000236850 RGPD3A6NKT7 1758 aaPredicted RBP20.97■□□□□ 0.95
APOA1-201ENST00000236850 RGPD4Q7Z3J3 1758 aa20.97■□□□□ 0.95
APOA1-201ENST00000236850 PSDA5PKW4 1024 aaPredicted RBP20.97■□□□□ 0.95
APOA1-201ENST00000236850 MEGF6O75095 1541 aa20.96■□□□□ 0.95
APOA1-201ENST00000236850 PER1O15534 1290 aaPredicted RBP20.96■□□□□ 0.95
APOA1-201ENST00000236850 NHSQ6T4R5 1651 aa20.95■□□□□ 0.94
APOA1-201ENST00000236850 RREB1Q92766 1687 aa20.94■□□□□ 0.94
APOA1-201ENST00000236850 ZNF316A6NFI3 1004 aaPredicted RBP20.94■□□□□ 0.94
APOA1-201ENST00000236850 ACSBG1Q96GR2 724 aa20.94■□□□□ 0.94
APOA1-201ENST00000236850 EYA1Q99502 592 aa20.94■□□□□ 0.94
APOA1-201ENST00000236850 PCDH11XQ9BZA7 1347 aa20.93■□□□□ 0.94
APOA1-201ENST00000236850 PCDH11YQ9BZA8 1340 aa20.93■□□□□ 0.94
APOA1-201ENST00000236850 NPC1L1Q9UHC9 1359 aa20.93■□□□□ 0.94
APOA1-201ENST00000236850 NCAPD2Q15021 1401 aa20.93■□□□□ 0.94
APOA1-201ENST00000236850 KCNQ2O43526 872 aa20.92■□□□□ 0.94
APOA1-201ENST00000236850 EIF4A2Q14240 407 aaKnown RBP20.92■□□□□ 0.94
APOA1-201ENST00000236850 PTF1AQ7RTS3 328 aa20.91■□□□□ 0.94
APOA1-201ENST00000236850 SPG7Q9UQ90 795 aa20.91■□□□□ 0.94
APOA1-201ENST00000236850 PLEKHG2Q9H7P9 1386 aa20.9■□□□□ 0.94
APOA1-201ENST00000236850 R3HDM1Q15032 1099 aaKnown RBP20.9■□□□□ 0.94
APOA1-201ENST00000236850 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.9■□□□□ 0.94
APOA1-201ENST00000236850 NUP188Q5SRE5 1749 aa20.9■□□□□ 0.94
APOA1-201ENST00000236850 CC2D1BQ5T0F9 858 aaKnown RBP20.89■□□□□ 0.93
APOA1-201ENST00000236850 SHANK3Q9BYB0 1731 aa20.89■□□□□ 0.93
APOA1-201ENST00000236850 TXNRD1Q16881 649 aa20.88■□□□□ 0.93
APOA1-201ENST00000236850 SYTL4Q96C24 671 aaPredicted RBP20.88■□□□□ 0.93
APOA1-201ENST00000236850 BTAF1O14981 1849 aa20.88■□□□□ 0.93
APOA1-201ENST00000236850 IGSF1Q8N6C5 1336 aa20.86■□□□□ 0.93
APOA1-201ENST00000236850 PRIM1P49642 420 aaKnown RBP20.86■□□□□ 0.93
APOA1-201ENST00000236850 PKD1L3Q7Z443 1732 aa20.85■□□□□ 0.93
APOA1-201ENST00000236850 MTHFSP49914 203 aa20.85■□□□□ 0.93
APOA1-201ENST00000236850 HMGB2P26583 209 aaKnown RBP20.84■□□□□ 0.93
APOA1-201ENST00000236850 PROM2Q8N271 834 aa20.84■□□□□ 0.93
APOA1-201ENST00000236850 DOT1LQ8TEK3 1739 aa20.84■□□□□ 0.93
APOA1-201ENST00000236850 CYP27B1O15528 508 aa20.83■□□□□ 0.93
APOA1-201ENST00000236850 PLEKHO1Q53GL0 409 aaPredicted RBP20.82■□□□□ 0.92
APOA1-201ENST00000236850 SLC27A3Q5K4L6 730 aa20.82■□□□□ 0.92
APOA1-201ENST00000236850 IFNL2Q8IZJ0 200 aa20.82■□□□□ 0.92
APOA1-201ENST00000236850 STK32BQ9NY57 414 aa20.82■□□□□ 0.92
APOA1-201ENST00000236850 IL13P35225 146 aa20.81■□□□□ 0.92
APOA1-201ENST00000236850 NKX1-1Q15270 411 aaPredicted RBP20.81■□□□□ 0.92
APOA1-201ENST00000236850 AMOTQ4VCS5 1084 aa20.81■□□□□ 0.92
APOA1-201ENST00000236850 DIAPH1O60610 1272 aaKnown RBP20.78■□□□□ 0.92
APOA1-201ENST00000236850 HSP90AB1P08238 724 aaKnown RBP20.78■□□□□ 0.92
APOA1-201ENST00000236850 CNGB1Q14028 1251 aaPredicted RBP20.78■□□□□ 0.92
APOA1-201ENST00000236850 SULT6B1Q6IMI4 303 aa20.78■□□□□ 0.92
APOA1-201ENST00000236850 PHKG2P15735 406 aa20.77■□□□□ 0.92
APOA1-201ENST00000236850 SLC15A2Q16348 729 aa20.77■□□□□ 0.92
APOA1-201ENST00000236850 KDRP35968 1356 aa20.76■□□□□ 0.91
APOA1-201ENST00000236850 MPRIPQ6WCQ1 1025 aa20.76■□□□□ 0.91
APOA1-201ENST00000236850 SMARCC1Q92922 1105 aaPredicted RBP20.76■□□□□ 0.91
APOA1-201ENST00000236850 CFAP53Q96M91 514 aa20.76■□□□□ 0.91
APOA1-201ENST00000236850 ANO8Q9HCE9 1232 aaPredicted RBP20.76■□□□□ 0.91
APOA1-201ENST00000236850 ITGB4P16144 1822 aa20.75■□□□□ 0.91
APOA1-201ENST00000236850 C1orf141Q5JVX7 400 aa20.74■□□□□ 0.91
APOA1-201ENST00000236850 ZNF530Q6P9A1 599 aaPredicted RBP20.74■□□□□ 0.91
APOA1-201ENST00000236850 LY75O60449 1722 aa20.73■□□□□ 0.91
APOA1-201ENST00000236850 AEBP1Q8IUX7 1158 aa20.73■□□□□ 0.91
APOA1-201ENST00000236850 DCAF5Q96JK2 942 aa20.73■□□□□ 0.91
APOA1-201ENST00000236850 TMOD3Q9NYL9 352 aa20.73■□□□□ 0.91
APOA1-201ENST00000236850 DDX10Q13206 875 aaKnown RBP20.72■□□□□ 0.91
APOA1-201ENST00000236850 SPON1Q9HCB6 807 aa20.72■□□□□ 0.91
APOA1-201ENST00000236850 LRRC4BQ9NT99 713 aa20.72■□□□□ 0.91
APOA1-201ENST00000236850 CCNL1Q9UK58 526 aaPredicted RBP20.72■□□□□ 0.91
APOA1-201ENST00000236850 ERVV-2B6SEH9 535 aa20.71■□□□□ 0.91
APOA1-201ENST00000236850 PIGBQ92521 554 aa20.7■□□□□ 0.9
APOA1-201ENST00000236850 TOGARAM1Q9Y4F4 1720 aa20.7■□□□□ 0.9
APOA1-201ENST00000236850 NUDCQ9Y266 331 aa20.69■□□□□ 0.9
APOA1-201ENST00000236850 PALLDQ8WX93 1383 aa20.69■□□□□ 0.9
APOA1-201ENST00000236850 PAPPAQ13219 1627 aa20.68■□□□□ 0.9
APOA1-201ENST00000236850 U2SURPO15042 1029 aaKnown RBP20.68■□□□□ 0.9
APOA1-201ENST00000236850 HMOX1P09601 288 aa20.68■□□□□ 0.9
APOA1-201ENST00000236850 PPP2R1AP30153 589 aa20.67■□□□□ 0.9
APOA1-201ENST00000236850 AKT1S1Q96B36 256 aa20.67■□□□□ 0.9
APOA1-201ENST00000236850 TFCP2L1Q9NZI6 479 aa20.66■□□□□ 0.9
APOA1-201ENST00000236850 CASZ1Q86V15 1759 aa20.66■□□□□ 0.9
APOA1-201ENST00000236850 COL3A1P02461 1466 aaPredicted RBP20.65■□□□□ 0.9
APOA1-201ENST00000236850 CABP4P57796 275 aa20.65■□□□□ 0.9
APOA1-201ENST00000236850 AKAP4Q5JQC9 854 aa20.65■□□□□ 0.9
APOA1-201ENST00000236850 PPP1R1BQ9UD71 204 aaPredicted RBP20.65■□□□□ 0.9
APOA1-201ENST00000236850 ZNF827Q17R98 1081 aa20.64■□□□□ 0.89
APOA1-201ENST00000236850 SLC16A10Q8TF71 515 aa20.64■□□□□ 0.89
APOA1-201ENST00000236850 QSER1Q2KHR3 1735 aa20.64■□□□□ 0.89
APOA1-201ENST00000236850 KCNQ4P56696 695 aa20.63■□□□□ 0.89
APOA1-201ENST00000236850 MTFR1LQ9H019 292 aa20.63■□□□□ 0.89
APOA1-201ENST00000236850 LOC102724428A0A0B4J2F2 783 aa20.62■□□□□ 0.89
APOA1-201ENST00000236850 ZBTB7AO95365 584 aa20.62■□□□□ 0.89
APOA1-201ENST00000236850 SIK1P57059 783 aa20.62■□□□□ 0.89
APOA1-201ENST00000236850 FLAD1Q8NFF5 587 aa20.61■□□□□ 0.89
APOA1-201ENST00000236850 ASAP1Q9ULH1 1129 aa20.61■□□□□ 0.89
APOA1-201ENST00000236850 KDM6AO15550 1401 aaPredicted RBP20.61■□□□□ 0.89
APOA1-201ENST00000236850 C5P01031 1676 aa20.61■□□□□ 0.89
APOA1-201ENST00000236850 TAF1LQ8IZX4 1826 aa20.6■□□□□ 0.89
APOA1-201ENST00000236850 RALBP1Q15311 655 aa20.6■□□□□ 0.89
APOA1-201ENST00000236850 GAS2L2Q8NHY3 880 aa20.6■□□□□ 0.89
APOA1-201ENST00000236850 PDGFDQ9GZP0 370 aaPredicted RBP20.6■□□□□ 0.89
APOA1-201ENST00000236850 ATG3Q9NT62 314 aa20.6■□□□□ 0.89
APOA1-201ENST00000236850 SCN11AQ9UI33 1791 aa20.59■□□□□ 0.89
APOA1-201ENST00000236850 MTHFSDQ2M296 383 aaKnown RBP20.59■□□□□ 0.89
APOA1-201ENST00000236850 U2AF1L5P0DN76 240 aaPredicted RBP20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms