RNA–Protein interactions for RNA: ENST00000223122.3

C1GALT1-201, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1GALT1, Length 6,078 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-201ENST00000223122 TATP17735 454 aaPredicted RBP9.67□□□□□ -0.86
C1GALT1-201ENST00000223122 AK7Q96M32 723 aa9.67□□□□□ -0.86
C1GALT1-201ENST00000223122 ANKRD1Q15327 319 aa9.67□□□□□ -0.86
C1GALT1-201ENST00000223122 BLOC1S2Q6QNY1 142 aa9.67□□□□□ -0.86
C1GALT1-201ENST00000223122 MAP7D2Q96T17 732 aa9.67□□□□□ -0.86
C1GALT1-201ENST00000223122 UPF3BQ9BZI7 483 aaKnown RBP9.67□□□□□ -0.86
C1GALT1-201ENST00000223122 RPGRIP1LQ68CZ1 1315 aa9.67□□□□□ -0.86
C1GALT1-201ENST00000223122 CCDC85AQ96PX6 553 aaPredicted RBP9.67□□□□□ -0.86
C1GALT1-201ENST00000223122 GNAT3A8MTJ3 354 aa9.67□□□□□ -0.86
C1GALT1-201ENST00000223122 MX1P20591 662 aa9.67□□□□□ -0.86
C1GALT1-201ENST00000223122 SART3Q15020 963 aaKnown RBP9.67□□□□□ -0.86
C1GALT1-201ENST00000223122 MTERF4Q7Z6M4 381 aaKnown RBP9.67□□□□□ -0.86
C1GALT1-201ENST00000223122 RPAP2Q8IXW5 612 aaPredicted RBP9.67□□□□□ -0.86
C1GALT1-201ENST00000223122 NUP62CLQ9H1M0 184 aa9.67□□□□□ -0.86
C1GALT1-201ENST00000223122 CTDP1Q9Y5B0 961 aaPredicted RBP9.67□□□□□ -0.86
C1GALT1-201ENST00000223122 PRPF40BQ6NWY9 871 aaKnown RBP9.66□□□□□ -0.86
C1GALT1-201ENST00000223122 EPS15P42566 896 aa9.66□□□□□ -0.86
C1GALT1-201ENST00000223122 FERMT3Q86UX7 667 aa9.66□□□□□ -0.86
C1GALT1-201ENST00000223122 TSHZ3Q63HK5 1081 aa9.66□□□□□ -0.86
C1GALT1-201ENST00000223122 NUP133Q8WUM0 1156 aa9.66□□□□□ -0.86
C1GALT1-201ENST00000223122 RBM27Q9P2N5 1060 aaKnown RBP9.66□□□□□ -0.86
C1GALT1-201ENST00000223122 ALDH1L2Q3SY69 923 aa9.65□□□□□ -0.86
C1GALT1-201ENST00000223122 HSP90B2PQ58FF3 399 aa9.65□□□□□ -0.86
C1GALT1-201ENST00000223122 CCDC69A6NI79 296 aa9.65□□□□□ -0.86
C1GALT1-201ENST00000223122 NOS1P29475 1434 aa9.65□□□□□ -0.86
C1GALT1-201ENST00000223122 SCAF11Q99590 1463 aaKnown RBP9.65□□□□□ -0.86
C1GALT1-201ENST00000223122 FBLN1P23142 703 aa9.65□□□□□ -0.86
C1GALT1-201ENST00000223122 ACBD3Q9H3P7 528 aa9.65□□□□□ -0.86
C1GALT1-201ENST00000223122 SLC52A1Q9NWF4 448 aa9.65□□□□□ -0.86
C1GALT1-201ENST00000223122 CTTNBP2Q8WZ74 1663 aa9.65□□□□□ -0.86
C1GALT1-201ENST00000223122 TBC1D9Q6ZT07 1266 aa9.65□□□□□ -0.87
C1GALT1-201ENST00000223122 MEX3CQ5U5Q3 659 aaKnown RBP9.64□□□□□ -0.87
C1GALT1-201ENST00000223122 PROSER2Q86WR7 435 aaPredicted RBP9.64□□□□□ -0.87
C1GALT1-201ENST00000223122 FAM83GA6ND36 823 aa9.64□□□□□ -0.87
C1GALT1-201ENST00000223122 HMGN5P82970 282 aaKnown RBP9.64□□□□□ -0.87
C1GALT1-201ENST00000223122 CCDC112Q8NEF3 446 aa9.64□□□□□ -0.87
C1GALT1-201ENST00000223122 GDPD2Q9HCC8 539 aa9.64□□□□□ -0.87
C1GALT1-201ENST00000223122 FILIP1LQ4L180 1135 aa9.64□□□□□ -0.87
C1GALT1-201ENST00000223122 PIBF1Q8WXW3 757 aa9.64□□□□□ -0.87
C1GALT1-201ENST00000223122 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.64□□□□□ -0.87
C1GALT1-201ENST00000223122 ZSCAN31Q96LW9 406 aaPredicted RBP9.64□□□□□ -0.87
C1GALT1-201ENST00000223122 MAGEC2Q9UBF1 373 aaPredicted RBP9.64□□□□□ -0.87
C1GALT1-201ENST00000223122 LRRFIP2Q9Y608 721 aaKnown RBP9.64□□□□□ -0.87
C1GALT1-201ENST00000223122 SMARCE1Q969G3 411 aa9.64□□□□□ -0.87
C1GALT1-201ENST00000223122 PRDM10Q9NQV6 1147 aa9.64□□□□□ -0.87
C1GALT1-201ENST00000223122 UGGT2Q9NYU1 1516 aa9.64□□□□□ -0.87
C1GALT1-201ENST00000223122 GRIN2AQ12879 1464 aa9.63□□□□□ -0.87
C1GALT1-201ENST00000223122 BOLA2Q9H3K6 86 aa9.63□□□□□ -0.87
C1GALT1-201ENST00000223122 TNNQ9UQP3 1299 aa9.63□□□□□ -0.87
C1GALT1-201ENST00000223122 FILIP1Q7Z7B0 1213 aa9.63□□□□□ -0.87
C1GALT1-201ENST00000223122 PKNOX2Q96KN3 472 aa9.63□□□□□ -0.87
C1GALT1-201ENST00000223122 ZSCAN30Q86W11 494 aa9.63□□□□□ -0.87
C1GALT1-201ENST00000223122 CCDC43Q96MW1 224 aaKnown RBP9.63□□□□□ -0.87
C1GALT1-201ENST00000223122 CCP110O43303 1012 aa9.63□□□□□ -0.87
C1GALT1-201ENST00000223122 TOM1L2Q6ZVM7 507 aa9.63□□□□□ -0.87
C1GALT1-201ENST00000223122 LAMC3Q9Y6N6 1575 aa9.63□□□□□ -0.87
C1GALT1-201ENST00000223122 URB2Q14146 1524 aaKnown RBP9.63□□□□□ -0.87
C1GALT1-201ENST00000223122 SPG7Q9UQ90 795 aa9.62□□□□□ -0.87
C1GALT1-201ENST00000223122 GUCY1B3Q02153 619 aa9.62□□□□□ -0.87
C1GALT1-201ENST00000223122 IKQ13123 557 aaPredicted RBP9.62□□□□□ -0.87
C1GALT1-201ENST00000223122 CCDC57Q2TAC2 916 aa9.62□□□□□ -0.87
C1GALT1-201ENST00000223122 MAP3K11Q16584 847 aa9.62□□□□□ -0.87
C1GALT1-201ENST00000223122 CDK5RAP3Q96JB5 506 aa9.62□□□□□ -0.87
C1GALT1-201ENST00000223122 CCDC8Q9H0W5 538 aaPredicted RBP9.62□□□□□ -0.87
C1GALT1-201ENST00000223122 RAPGEF6Q8TEU7 1601 aa9.62□□□□□ -0.87
C1GALT1-201ENST00000223122 CFAP43Q8NDM7 1665 aa9.62□□□□□ -0.87
C1GALT1-201ENST00000223122 MYD88Q99836 296 aa9.62□□□□□ -0.87
C1GALT1-201ENST00000223122 PPP6R1Q9UPN7 881 aa9.62□□□□□ -0.87
C1GALT1-201ENST00000223122 ADGRL1O94910 1474 aa9.62□□□□□ -0.87
C1GALT1-201ENST00000223122 TBC1D32Q96NH3 1257 aa9.62□□□□□ -0.87
C1GALT1-201ENST00000223122 MBIPQ9NS73 344 aa9.61□□□□□ -0.87
C1GALT1-201ENST00000223122 OFD1O75665 1012 aa9.61□□□□□ -0.87
C1GALT1-201ENST00000223122 KIF1BPQ96EK5 621 aa9.61□□□□□ -0.87
C1GALT1-201ENST00000223122 FBXO3Q9UK99 471 aa9.61□□□□□ -0.87
C1GALT1-201ENST00000223122 RALGAPBQ86X10 1494 aa9.61□□□□□ -0.87
C1GALT1-201ENST00000223122 NOM1Q5C9Z4 860 aaKnown RBP9.61□□□□□ -0.87
C1GALT1-201ENST00000223122 CCDC183Q5T5S1 534 aa9.61□□□□□ -0.87
C1GALT1-201ENST00000223122 PPFIBP1Q86W92 1011 aa9.61□□□□□ -0.87
C1GALT1-201ENST00000223122 ABCC11Q96J66 1382 aa9.61□□□□□ -0.87
C1GALT1-201ENST00000223122 ZC3H6P61129 1189 aaKnown RBP9.61□□□□□ -0.87
C1GALT1-201ENST00000223122 CFAP45Q9UL16 551 aa9.61□□□□□ -0.87
C1GALT1-201ENST00000223122 ITSN2Q9NZM3 1697 aa9.6□□□□□ -0.87
C1GALT1-201ENST00000223122 TXLNAP40222 546 aa9.6□□□□□ -0.87
C1GALT1-201ENST00000223122 C8orf34Q49A92 452 aa9.6□□□□□ -0.87
C1GALT1-201ENST00000223122 CT47A1Q5JQC4 288 aaPredicted RBP9.6□□□□□ -0.87
C1GALT1-201ENST00000223122 FBXO31Q5XUX0 539 aaPredicted RBP9.6□□□□□ -0.87
C1GALT1-201ENST00000223122 TMX1Q9H3N1 280 aa9.6□□□□□ -0.87
C1GALT1-201ENST00000223122 ASXL1Q8IXJ9 1541 aa9.6□□□□□ -0.87
C1GALT1-201ENST00000223122 ERICH4A6NGS2 130 aa9.6□□□□□ -0.87
C1GALT1-201ENST00000223122 HSP90AB2PQ58FF8 381 aa9.6□□□□□ -0.87
C1GALT1-201ENST00000223122 PCDHB15Q9Y5E8 787 aa9.6□□□□□ -0.87
C1GALT1-201ENST00000223122 RAB11FIP3O75154 756 aa9.6□□□□□ -0.87
C1GALT1-201ENST00000223122 TAF7Q15545 349 aaPredicted RBP9.6□□□□□ -0.87
C1GALT1-201ENST00000223122 JMYQ8N9B5 988 aa9.6□□□□□ -0.87
C1GALT1-201ENST00000223122 DNAJC5BQ9UF47 199 aa9.6□□□□□ -0.87
C1GALT1-201ENST00000223122 USP25Q9UHP3 1055 aa9.6□□□□□ -0.87
C1GALT1-201ENST00000223122 ATP2B2Q01814 1243 aa9.6□□□□□ -0.87
C1GALT1-201ENST00000223122 CKAP2LQ8IYA6 745 aa9.6□□□□□ -0.87
C1GALT1-201ENST00000223122 TRIM22Q8IYM9 498 aa9.6□□□□□ -0.87
C1GALT1-201ENST00000223122 SLC3A2P08195 630 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms