RNA–Protein interactions for RNA: ENST00000220478.7

SCG3-201, Transcript of secretogranin III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG3, Length 3,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-201ENST00000220478 PIBF1Q8WXW3 757 aa9.71□□□□□ -0.86
SCG3-201ENST00000220478 BCL2L12Q9HB09 334 aa9.71□□□□□ -0.86
SCG3-201ENST00000220478 SMC4Q9NTJ3 1288 aa9.71□□□□□ -0.86
SCG3-201ENST00000220478 ABCC11Q96J66 1382 aa9.7□□□□□ -0.86
SCG3-201ENST00000220478 KIF1BO60333 1816 aa9.7□□□□□ -0.86
SCG3-201ENST00000220478 PLEKHD1A6NEE1 506 aa9.7□□□□□ -0.86
SCG3-201ENST00000220478 PLCD4Q9BRC7 762 aa9.7□□□□□ -0.86
SCG3-201ENST00000220478 CARMIL2Q6F5E8 1435 aa9.7□□□□□ -0.86
SCG3-201ENST00000220478 ZBTB7BO15156 539 aaPredicted RBP9.7□□□□□ -0.86
SCG3-201ENST00000220478 ZNF830Q96NB3 372 aaPredicted RBP9.7□□□□□ -0.86
SCG3-201ENST00000220478 USP26Q9BXU7 913 aa9.7□□□□□ -0.86
SCG3-201ENST00000220478 MTHFSP49914 203 aa9.69□□□□□ -0.86
SCG3-201ENST00000220478 FKBP5Q13451 457 aaPredicted RBP9.69□□□□□ -0.86
SCG3-201ENST00000220478 ANP32BQ92688 251 aaKnown RBP9.69□□□□□ -0.86
SCG3-201ENST00000220478 ARHGAP5Q13017 1502 aa9.69□□□□□ -0.86
SCG3-201ENST00000220478 PPLO60437 1756 aa9.69□□□□□ -0.86
SCG3-201ENST00000220478 LETM1O95202 739 aaPredicted RBP9.69□□□□□ -0.86
SCG3-201ENST00000220478 PTCH1Q13635 1447 aa9.69□□□□□ -0.86
SCG3-201ENST00000220478 GOLGA6L22H0YM25 854 aa9.69□□□□□ -0.86
SCG3-201ENST00000220478 PRIMPOLQ96LW4 560 aa9.69□□□□□ -0.86
SCG3-201ENST00000220478 TNNT2P45379 298 aaPredicted RBP9.68□□□□□ -0.86
SCG3-201ENST00000220478 KIAA2012Q0VF49 1180 aa9.68□□□□□ -0.86
SCG3-201ENST00000220478 PROM2Q8N271 834 aa9.68□□□□□ -0.86
SCG3-201ENST00000220478 TRAPPC8Q9Y2L5 1435 aa9.68□□□□□ -0.86
SCG3-201ENST00000220478 ARHGEF28Q8N1W1 1705 aaKnown RBP9.68□□□□□ -0.86
SCG3-201ENST00000220478 TULP4Q9NRJ4 1543 aa9.68□□□□□ -0.86
SCG3-201ENST00000220478 PLCH2O75038 1416 aa9.68□□□□□ -0.86
SCG3-201ENST00000220478 ADGRF5Q8IZF2 1346 aa9.68□□□□□ -0.86
SCG3-201ENST00000220478 NUCB2P80303 420 aa9.68□□□□□ -0.86
SCG3-201ENST00000220478 CFAP70Q5T0N1 1121 aa9.68□□□□□ -0.86
SCG3-201ENST00000220478 RNF214Q8ND24 703 aa9.68□□□□□ -0.86
SCG3-201ENST00000220478 AP5Z1O43299 807 aa9.67□□□□□ -0.86
SCG3-201ENST00000220478 CTIFO43310 598 aaKnown RBP9.67□□□□□ -0.86
SCG3-201ENST00000220478 NOLC1Q14978 699 aaKnown RBP eCLIP9.67□□□□□ -0.86
SCG3-201ENST00000220478 DLG5Q8TDM6 1919 aa9.67□□□□□ -0.86
SCG3-201ENST00000220478 ABCC1P33527 1531 aa9.67□□□□□ -0.86
SCG3-201ENST00000220478 PLEKHM2Q8IWE5 1019 aa9.67□□□□□ -0.86
SCG3-201ENST00000220478 KCNF1Q9H3M0 494 aa9.67□□□□□ -0.86
SCG3-201ENST00000220478 RABEP1Q15276 862 aa9.67□□□□□ -0.86
SCG3-201ENST00000220478 MPNDQ8N594 471 aa9.67□□□□□ -0.86
SCG3-201ENST00000220478 CDC42BPGQ6DT37 1551 aa9.67□□□□□ -0.86
SCG3-201ENST00000220478 GTPBP6O43824 516 aaPredicted RBP9.66□□□□□ -0.86
SCG3-201ENST00000220478 U2AF2P26368 475 aaKnown RBP eCLIP9.66□□□□□ -0.86
SCG3-201ENST00000220478 HS6ST3Q8IZP7 471 aa9.66□□□□□ -0.86
SCG3-201ENST00000220478 SLC12A5Q9H2X9 1139 aa9.66□□□□□ -0.86
SCG3-201ENST00000220478 ZFYVE16Q7Z3T8 1539 aa9.66□□□□□ -0.86
SCG3-201ENST00000220478 ANKRD45Q5TZF3 282 aa9.66□□□□□ -0.86
SCG3-201ENST00000220478 UHRF1BP1LA0JNW5 1464 aa9.66□□□□□ -0.86
SCG3-201ENST00000220478 TTC12Q9H892 705 aaPredicted RBP9.66□□□□□ -0.86
SCG3-201ENST00000220478 GLI2P10070 1586 aa9.65□□□□□ -0.86
SCG3-201ENST00000220478 LRRC7Q96NW7 1537 aa9.65□□□□□ -0.86
SCG3-201ENST00000220478 TMPOP42166 694 aaKnown RBP9.65□□□□□ -0.86
SCG3-201ENST00000220478 MORC1Q86VD1 984 aa9.65□□□□□ -0.86
SCG3-201ENST00000220478 CDC45O75419 566 aa9.65□□□□□ -0.86
SCG3-201ENST00000220478 ARHGEF40Q8TER5 1519 aa9.65□□□□□ -0.87
SCG3-201ENST00000220478 ATP10DQ9P241 1426 aa9.64□□□□□ -0.87
SCG3-201ENST00000220478 GADD45BO75293 160 aaPredicted RBP9.64□□□□□ -0.87
SCG3-201ENST00000220478 BRD1O95696 1058 aa9.64□□□□□ -0.87
SCG3-201ENST00000220478 GCC1Q96CN9 775 aa9.64□□□□□ -0.87
SCG3-201ENST00000220478 ATAD2Q6PL18 1390 aa9.64□□□□□ -0.87
SCG3-201ENST00000220478 IL16Q14005 1332 aa9.64□□□□□ -0.87
SCG3-201ENST00000220478 PREX1Q8TCU6 1659 aa9.64□□□□□ -0.87
SCG3-201ENST00000220478 CHMP4BQ9H444 224 aaKnown RBP9.64□□□□□ -0.87
SCG3-201ENST00000220478 NAP1L2Q9ULW6 460 aaPredicted RBP9.64□□□□□ -0.87
SCG3-201ENST00000220478 ADGRB3O60242 1522 aa9.64□□□□□ -0.87
SCG3-201ENST00000220478 OTUD7AQ8TE49 926 aaPredicted RBP9.64□□□□□ -0.87
SCG3-201ENST00000220478 JPH4Q96JJ6 628 aa9.64□□□□□ -0.87
SCG3-201ENST00000220478 ABCC4O15439 1325 aa9.63□□□□□ -0.87
SCG3-201ENST00000220478 SLFN14P0C7P3 912 aa9.63□□□□□ -0.87
SCG3-201ENST00000220478 C16orf71Q8IYS4 520 aaPredicted RBP9.63□□□□□ -0.87
SCG3-201ENST00000220478 KIF3AQ9Y496 699 aa9.63□□□□□ -0.87
SCG3-201ENST00000220478 RIOK3O14730 519 aaKnown RBP9.63□□□□□ -0.87
SCG3-201ENST00000220478 TTC22Q5TAA0 569 aa9.63□□□□□ -0.87
SCG3-201ENST00000220478 FUCA2Q9BTY2 467 aa9.63□□□□□ -0.87
SCG3-201ENST00000220478 PYCARDQ9ULZ3 195 aa9.63□□□□□ -0.87
SCG3-201ENST00000220478 ANKRD36BQ8N2N9 1353 aa9.63□□□□□ -0.87
SCG3-201ENST00000220478 ANAPC15P60006 121 aa9.62□□□□□ -0.87
SCG3-201ENST00000220478 ALDH1L2Q3SY69 923 aa9.62□□□□□ -0.87
SCG3-201ENST00000220478 BARGINQ6ZT62 677 aa9.62□□□□□ -0.87
SCG3-201ENST00000220478 KIAA1524Q8TCG1 905 aa9.62□□□□□ -0.87
SCG3-201ENST00000220478 TSPY26PQ9H489 355 aa9.62□□□□□ -0.87
SCG3-201ENST00000220478 ZCCHC11Q5TAX3 1644 aaKnown RBP9.62□□□□□ -0.87
SCG3-201ENST00000220478 CAMSAP1Q5T5Y3 1602 aa9.62□□□□□ -0.87
SCG3-201ENST00000220478 LOC102724159A0A0B4J2E5 919 aa9.62□□□□□ -0.87
SCG3-201ENST00000220478 NCBP1Q09161 790 aaKnown RBP9.62□□□□□ -0.87
SCG3-201ENST00000220478 PWP2Q15269 919 aaKnown RBP9.62□□□□□ -0.87
SCG3-201ENST00000220478 USP25Q9UHP3 1055 aa9.62□□□□□ -0.87
SCG3-201ENST00000220478 RGS12O14924 1447 aa9.62□□□□□ -0.87
SCG3-201ENST00000220478 RPAP1Q9BWH6 1393 aaPredicted RBP9.61□□□□□ -0.87
SCG3-201ENST00000220478 VGLL3A8MV65 326 aa9.61□□□□□ -0.87
SCG3-201ENST00000220478 MRPL50Q8N5N7 158 aaKnown RBP9.61□□□□□ -0.87
SCG3-201ENST00000220478 CTNNA3Q9UI47 895 aa9.61□□□□□ -0.87
SCG3-201ENST00000220478 NOL8Q76FK4 1167 aaKnown RBP9.61□□□□□ -0.87
SCG3-201ENST00000220478 FAM53CQ9NYF3 392 aa9.61□□□□□ -0.87
SCG3-201ENST00000220478 CD163L1Q9NR16 1453 aa9.61□□□□□ -0.87
SCG3-201ENST00000220478 U2AF1L5P0DN76 240 aaPredicted RBP9.61□□□□□ -0.87
SCG3-201ENST00000220478 IRX5P78411 483 aaPredicted RBP9.61□□□□□ -0.87
SCG3-201ENST00000220478 U2AF1Q01081 240 aaKnown RBP eCLIP9.61□□□□□ -0.87
SCG3-201ENST00000220478 SETQ01105 290 aaPredicted RBP9.61□□□□□ -0.87
SCG3-201ENST00000220478 CUL4AQ13619 759 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms