RNA–Protein interactions for RNA: ENST00000219548.8

STUB1-201, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STUB1, Length 1,472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-201ENST00000219548 TATP17735 454 aaPredicted RBP35.6■■■■□ 3.29
STUB1-201ENST00000219548 MIER1Q8N108 512 aa35.6■■■■□ 3.29
STUB1-201ENST00000219548 PKD1L3Q7Z443 1732 aa35.59■■■■□ 3.29
STUB1-201ENST00000219548 TNS2Q63HR2 1409 aa35.58■■■■□ 3.29
STUB1-201ENST00000219548 DDB1Q16531 1140 aa35.57■■■■□ 3.28
STUB1-201ENST00000219548 EP400Q96L91 3159 aa35.54■■■■□ 3.28
STUB1-201ENST00000219548 WDR43Q15061 677 aaKnown RBP eCLIP35.54■■■■□ 3.28
STUB1-201ENST00000219548 RSPH6AQ9H0K4 717 aa35.54■■■■□ 3.28
STUB1-201ENST00000219548 EXOC5O00471 708 aa35.53■■■■□ 3.28
STUB1-201ENST00000219548 PRKAR2BP31323 418 aa35.51■■■■□ 3.28
STUB1-201ENST00000219548 ZCRB1Q8TBF4 217 aaKnown RBP35.51■■■■□ 3.28
STUB1-201ENST00000219548 PDE3BQ13370 1112 aa35.49■■■■□ 3.27
STUB1-201ENST00000219548 FCHSD2O94868 740 aa35.48■■■■□ 3.27
STUB1-201ENST00000219548 KRT27Q7Z3Y8 459 aa35.48■■■■□ 3.27
STUB1-201ENST00000219548 ADAMTS8Q9UP79 889 aa35.48■■■■□ 3.27
STUB1-201ENST00000219548 CCER2I3L3R5 266 aa35.47■■■■□ 3.27
STUB1-201ENST00000219548 FAM182BQ5T319 152 aa35.47■■■■□ 3.27
STUB1-201ENST00000219548 ILDR2Q71H61 639 aa35.47■■■■□ 3.27
STUB1-201ENST00000219548 PNISRQ8TF01 805 aaKnown RBP35.47■■■■□ 3.27
STUB1-201ENST00000219548 PLEKHG2Q9H7P9 1386 aa35.45■■■■□ 3.27
STUB1-201ENST00000219548 DDX54Q8TDD1 881 aaKnown RBP35.45■■■■□ 3.27
STUB1-201ENST00000219548 SPG7Q9UQ90 795 aa35.45■■■■□ 3.27
STUB1-201ENST00000219548 MARCH10Q8NA82 808 aaPredicted RBP35.44■■■■□ 3.26
STUB1-201ENST00000219548 PLEKHO1Q53GL0 409 aaPredicted RBP35.43■■■■□ 3.26
STUB1-201ENST00000219548 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP35.43■■■■□ 3.26
STUB1-201ENST00000219548 KAT6BQ8WYB5 2073 aa35.43■■■■□ 3.26
STUB1-201ENST00000219548 PCDH11XQ9BZA7 1347 aa35.43■■■■□ 3.26
STUB1-201ENST00000219548 PCDH11YQ9BZA8 1340 aa35.43■■■■□ 3.26
STUB1-201ENST00000219548 PHACTR3Q96KR7 559 aa35.42■■■■□ 3.26
STUB1-201ENST00000219548 AMOTQ4VCS5 1084 aa35.41■■■■□ 3.26
STUB1-201ENST00000219548 CYP27B1O15528 508 aa35.4■■■■□ 3.26
STUB1-201ENST00000219548 PLEKHF1Q96S99 279 aa35.4■■■■□ 3.26
STUB1-201ENST00000219548 ZNF530Q6P9A1 599 aaPredicted RBP35.39■■■■□ 3.26
STUB1-201ENST00000219548 CCDC146Q8IYE0 955 aa35.39■■■■□ 3.26
STUB1-201ENST00000219548 MTHFSDQ2M296 383 aaKnown RBP35.38■■■■□ 3.25
STUB1-201ENST00000219548 VIRMAQ69YN4 1812 aaKnown RBP35.37■■■■□ 3.25
STUB1-201ENST00000219548 FAM9BQ8IZU0 186 aa35.36■■■■□ 3.25
STUB1-201ENST00000219548 DLG5Q8TDM6 1919 aa35.36■■■■□ 3.25
STUB1-201ENST00000219548 SBF2Q86WG5 1849 aa35.36■■■■□ 3.25
STUB1-201ENST00000219548 PNNQ9H307 717 aaKnown RBP35.35■■■■□ 3.25
STUB1-201ENST00000219548 DOT1LQ8TEK3 1739 aa35.34■■■■□ 3.25
STUB1-201ENST00000219548 PHKG2P15735 406 aa35.34■■■■□ 3.25
STUB1-201ENST00000219548 MAPK8IP3Q9UPT6 1336 aa35.33■■■■□ 3.25
STUB1-201ENST00000219548 IFNL2Q8IZJ0 200 aa35.33■■■■□ 3.25
STUB1-201ENST00000219548 NEFMP07197 916 aa35.32■■■■□ 3.24
STUB1-201ENST00000219548 TOGARAM1Q9Y4F4 1720 aa35.32■■■■□ 3.24
STUB1-201ENST00000219548 C1orf141Q5JVX7 400 aa35.3■■■■□ 3.24
STUB1-201ENST00000219548 GAS2L2Q8NHY3 880 aa35.3■■■■□ 3.24
STUB1-201ENST00000219548 RUNDC1Q96C34 613 aa35.29■■■■□ 3.24
STUB1-201ENST00000219548 FAM196AQ6ZSG2 479 aa35.28■■■■□ 3.24
STUB1-201ENST00000219548 SCN11AQ9UI33 1791 aa35.27■■■■□ 3.24
STUB1-201ENST00000219548 AKAP4Q5JQC9 854 aa35.27■■■■□ 3.24
STUB1-201ENST00000219548 ITGB4P16144 1822 aa35.26■■■■□ 3.23
STUB1-201ENST00000219548 BCL9O00512 1426 aa35.25■■■■□ 3.23
STUB1-201ENST00000219548 KDM6AO15550 1401 aaPredicted RBP35.24■■■■□ 3.23
STUB1-201ENST00000219548 MAP3K5Q99683 1374 aa35.24■■■■□ 3.23
STUB1-201ENST00000219548 NKX1-1Q15270 411 aaPredicted RBP35.24■■■■□ 3.23
STUB1-201ENST00000219548 ACSBG1Q96GR2 724 aa35.24■■■■□ 3.23
STUB1-201ENST00000219548 NHSQ6T4R5 1651 aa35.23■■■■□ 3.23
STUB1-201ENST00000219548 MPRIPQ6WCQ1 1025 aa35.23■■■■□ 3.23
STUB1-201ENST00000219548 NFE2L2Q16236 605 aa35.22■■■■□ 3.23
STUB1-201ENST00000219548 RRP7AQ9Y3A4 280 aaKnown RBP35.22■■■■□ 3.23
STUB1-201ENST00000219548 ADAMTS7Q9UKP4 1686 aa35.22■■■■□ 3.23
STUB1-201ENST00000219548 GNAT3A8MTJ3 354 aa35.21■■■■□ 3.23
STUB1-201ENST00000219548 HSP90AB1P08238 724 aaKnown RBP35.21■■■■□ 3.23
STUB1-201ENST00000219548 SENP3-EIF4A1A0A087X0R7 540 aa35.2■■■■□ 3.23
STUB1-201ENST00000219548 TMPOP42166 694 aaKnown RBP35.19■■■■□ 3.22
STUB1-201ENST00000219548 DCAF5Q96JK2 942 aa35.19■■■■□ 3.22
STUB1-201ENST00000219548 APAF1O14727 1248 aa35.18■■■■□ 3.22
STUB1-201ENST00000219548 KCNQ2O43526 872 aa35.17■■■■□ 3.22
STUB1-201ENST00000219548 TRIM37O94972 964 aa35.17■■■■□ 3.22
STUB1-201ENST00000219548 NEUROD2Q15784 382 aa35.17■■■■□ 3.22
STUB1-201ENST00000219548 LGR6Q9HBX8 967 aa35.17■■■■□ 3.22
STUB1-201ENST00000219548 TNS1Q9HBL0 1735 aaKnown RBP35.17■■■■□ 3.22
STUB1-201ENST00000219548 PTF1AQ7RTS3 328 aa35.16■■■■□ 3.22
STUB1-201ENST00000219548 SYTL4Q96C24 671 aaPredicted RBP35.16■■■■□ 3.22
STUB1-201ENST00000219548 BTAF1O14981 1849 aa35.16■■■■□ 3.22
STUB1-201ENST00000219548 PRIM1P49642 420 aaKnown RBP35.16■■■■□ 3.22
STUB1-201ENST00000219548 RNMTO43148 476 aaKnown RBP35.15■■■■□ 3.22
STUB1-201ENST00000219548 RIPK4P57078 832 aa35.15■■■■□ 3.22
STUB1-201ENST00000219548 DCTN1Q14203 1278 aa35.12■■■■□ 3.21
STUB1-201ENST00000219548 IL17REQ8NFR9 667 aa35.12■■■■□ 3.21
STUB1-201ENST00000219548 MCM10Q7L590 875 aa35.11■■■■□ 3.21
STUB1-201ENST00000219548 RTF1Q92541 710 aaKnown RBP35.11■■■■□ 3.21
STUB1-201ENST00000219548 SIPA1L3O60292 1781 aaPredicted RBP35.09■■■■□ 3.21
STUB1-201ENST00000219548 MRC1P22897 1456 aa35.09■■■■□ 3.21
STUB1-201ENST00000219548 ERVV-2B6SEH9 535 aa35.09■■■■□ 3.21
STUB1-201ENST00000219548 BCL11BQ9C0K0 894 aaPredicted RBP35.09■■■■□ 3.21
STUB1-201ENST00000219548 HTATSF1O43719 755 aaKnown RBP35.08■■■■□ 3.21
STUB1-201ENST00000219548 CEMIPQ8WUJ3 1361 aa35.07■■■■□ 3.2
STUB1-201ENST00000219548 CABP4P57796 275 aa35.06■■■■□ 3.2
STUB1-201ENST00000219548 THUMPD2Q9BTF0 503 aaKnown RBP35.06■■■■□ 3.2
STUB1-201ENST00000219548 TMOD3Q9NYL9 352 aa35.06■■■■□ 3.2
STUB1-201ENST00000219548 TRIM35Q9UPQ4 493 aa35.05■■■■□ 3.2
STUB1-201ENST00000219548 PIGBQ92521 554 aa35.04■■■■□ 3.2
STUB1-201ENST00000219548 UPF1Q92900 1129 aaKnown RBP eCLIP35.04■■■■□ 3.2
STUB1-201ENST00000219548 SLC52A2Q9HAB3 445 aa35.04■■■■□ 3.2
STUB1-201ENST00000219548 NFATC2IPQ8NCF5 419 aa35.03■■■■□ 3.2
STUB1-201ENST00000219548 LMOD3Q0VAK6 560 aa35.03■■■■□ 3.2
STUB1-201ENST00000219548 SALL2Q9Y467 1007 aaPredicted RBP35.03■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms