RNA–Protein interactions for RNA: ENST00000216121.11

NIPSNAP1-201, Transcript of nipsnap homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPSNAP1, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP1-201ENST00000216121 SPRYD3Q8NCJ5 442 aa27.53■■■□□ 2
NIPSNAP1-201ENST00000216121 KDRP35968 1356 aa27.52■■■□□ 2
NIPSNAP1-201ENST00000216121 IL27Q8NEV9 243 aa27.52■■■□□ 2
NIPSNAP1-201ENST00000216121 RGPD8O14715 1765 aaPredicted RBP27.52■■■□□ 2
NIPSNAP1-201ENST00000216121 TBC1D9Q6ZT07 1266 aa27.51■■□□□ 1.99
NIPSNAP1-201ENST00000216121 ANKRD44Q8N8A2 993 aa27.51■■□□□ 1.99
NIPSNAP1-201ENST00000216121 NGDNQ8NEJ9 315 aaKnown RBP27.51■■□□□ 1.99
NIPSNAP1-201ENST00000216121 ATP10DQ9P241 1426 aa27.5■■□□□ 1.99
NIPSNAP1-201ENST00000216121 MTHFSDQ2M296 383 aaKnown RBP27.5■■□□□ 1.99
NIPSNAP1-201ENST00000216121 RPAP2Q8IXW5 612 aaPredicted RBP27.5■■□□□ 1.99
NIPSNAP1-201ENST00000216121 NCOA3Q9Y6Q9 1424 aa27.5■■□□□ 1.99
NIPSNAP1-201ENST00000216121 RIMS1Q86UR5 1692 aaKnown RBP27.49■■□□□ 1.99
NIPSNAP1-201ENST00000216121 THEMISQ8N1K5 641 aaPredicted RBP27.49■■□□□ 1.99
NIPSNAP1-201ENST00000216121 PLEKHM2Q8IWE5 1019 aa27.48■■□□□ 1.99
NIPSNAP1-201ENST00000216121 IGSF1Q8N6C5 1336 aa27.48■■□□□ 1.99
NIPSNAP1-201ENST00000216121 PIK3C2AO00443 1686 aa27.47■■□□□ 1.99
NIPSNAP1-201ENST00000216121 RTF1Q92541 710 aaKnown RBP27.47■■□□□ 1.99
NIPSNAP1-201ENST00000216121 KIF2CQ99661 725 aa27.47■■□□□ 1.99
NIPSNAP1-201ENST00000216121 FOXO3O43524 673 aa27.47■■□□□ 1.99
NIPSNAP1-201ENST00000216121 XRN1Q8IZH2 1706 aaKnown RBP27.46■■□□□ 1.99
NIPSNAP1-201ENST00000216121 CDC45O75419 566 aa27.45■■□□□ 1.99
NIPSNAP1-201ENST00000216121 MCM4P33991 863 aa27.45■■□□□ 1.99
NIPSNAP1-201ENST00000216121 AMPHP49418 695 aa27.45■■□□□ 1.99
NIPSNAP1-201ENST00000216121 CEP85Q6P2H3 762 aa27.45■■□□□ 1.99
NIPSNAP1-201ENST00000216121 EYA1Q99502 592 aa27.45■■□□□ 1.99
NIPSNAP1-201ENST00000216121 BRPF3Q9ULD4 1205 aa27.45■■□□□ 1.99
NIPSNAP1-201ENST00000216121 RTL1A6NKG5 1358 aa27.45■■□□□ 1.98
NIPSNAP1-201ENST00000216121 MSH6P52701 1360 aa27.45■■□□□ 1.98
NIPSNAP1-201ENST00000216121 SLC4A2P04920 1241 aa27.45■■□□□ 1.98
NIPSNAP1-201ENST00000216121 DDIT3P35638 169 aa27.44■■□□□ 1.98
NIPSNAP1-201ENST00000216121 GAS2L2Q8NHY3 880 aa27.44■■□□□ 1.98
NIPSNAP1-201ENST00000216121 ANKARQ7Z5J8 1434 aa27.44■■□□□ 1.98
NIPSNAP1-201ENST00000216121 GSPT1P15170 499 aaKnown RBP27.44■■□□□ 1.98
NIPSNAP1-201ENST00000216121 MIS18AQ9NYP9 233 aa27.44■■□□□ 1.98
NIPSNAP1-201ENST00000216121 FER1L4A9Z1Z3 1794 aa27.43■■□□□ 1.98
NIPSNAP1-201ENST00000216121 CEP170BQ9Y4F5 1589 aaPredicted RBP27.43■■□□□ 1.98
NIPSNAP1-201ENST00000216121 TSPYL4Q9UJ04 414 aa27.43■■□□□ 1.98
NIPSNAP1-201ENST00000216121 EIF5BO60841 1220 aaKnown RBP27.43■■□□□ 1.98
NIPSNAP1-201ENST00000216121 HTATSF1O43719 755 aaKnown RBP27.41■■□□□ 1.98
NIPSNAP1-201ENST00000216121 TTC22Q5TAA0 569 aa27.41■■□□□ 1.98
NIPSNAP1-201ENST00000216121 MEIS3Q99687 375 aa27.41■■□□□ 1.98
NIPSNAP1-201ENST00000216121 NLRP6P59044 892 aa27.4■■□□□ 1.98
NIPSNAP1-201ENST00000216121 PLPPR3Q6T4P5 718 aa27.38■■□□□ 1.97
NIPSNAP1-201ENST00000216121 C16orf71Q8IYS4 520 aaPredicted RBP27.38■■□□□ 1.97
NIPSNAP1-201ENST00000216121 USP54Q70EL1 1684 aa27.37■■□□□ 1.97
NIPSNAP1-201ENST00000216121 MARF1Q9Y4F3 1742 aaKnown RBP27.37■■□□□ 1.97
NIPSNAP1-201ENST00000216121 CIZ1Q9ULV3 898 aaPredicted RBP27.37■■□□□ 1.97
NIPSNAP1-201ENST00000216121 CCT4P50991 539 aaKnown RBP27.36■■□□□ 1.97
NIPSNAP1-201ENST00000216121 G2E3Q7L622 706 aa27.36■■□□□ 1.97
NIPSNAP1-201ENST00000216121 LRRC37A3O60309 1634 aa27.36■■□□□ 1.97
NIPSNAP1-201ENST00000216121 HSP90AB1P08238 724 aaKnown RBP27.36■■□□□ 1.97
NIPSNAP1-201ENST00000216121 KCNA6P17658 529 aa27.35■■□□□ 1.97
NIPSNAP1-201ENST00000216121 HOXC9P31274 260 aa27.35■■□□□ 1.97
NIPSNAP1-201ENST00000216121 HMMRO75330 724 aa27.33■■□□□ 1.97
NIPSNAP1-201ENST00000216121 NWD1Q149M9 1564 aa27.33■■□□□ 1.97
NIPSNAP1-201ENST00000216121 GNAT3A8MTJ3 354 aa27.32■■□□□ 1.96
NIPSNAP1-201ENST00000216121 OTUD7AQ8TE49 926 aaPredicted RBP27.32■■□□□ 1.96
NIPSNAP1-201ENST00000216121 CD2BP2O95400 341 aaKnown RBP27.32■■□□□ 1.96
NIPSNAP1-201ENST00000216121 F6X3S4 739 aa27.31■■□□□ 1.96
NIPSNAP1-201ENST00000216121 K7ELQ4 463 aaPredicted RBP27.31■■□□□ 1.96
NIPSNAP1-201ENST00000216121 STK31Q9BXU1 1019 aa27.31■■□□□ 1.96
NIPSNAP1-201ENST00000216121 L1TD1Q5T7N2 865 aaKnown RBP27.3■■□□□ 1.96
NIPSNAP1-201ENST00000216121 SLC4A10Q6U841 1118 aa27.3■■□□□ 1.96
NIPSNAP1-201ENST00000216121 DDX11L8A8MPP1 907 aa27.29■■□□□ 1.96
NIPSNAP1-201ENST00000216121 SMARCA5O60264 1052 aaPredicted RBP27.29■■□□□ 1.96
NIPSNAP1-201ENST00000216121 RBM42Q9BTD8 480 aaKnown RBP27.29■■□□□ 1.96
NIPSNAP1-201ENST00000216121 SOS1Q07889 1333 aaPredicted RBP27.29■■□□□ 1.96
NIPSNAP1-201ENST00000216121 CACNA1FO60840 1977 aa27.29■■□□□ 1.96
NIPSNAP1-201ENST00000216121 TRAK2O60296 914 aa27.28■■□□□ 1.96
NIPSNAP1-201ENST00000216121 CCDC30Q5VVM6 783 aa27.28■■□□□ 1.96
NIPSNAP1-201ENST00000216121 ABTB2Q8N961 1025 aa27.28■■□□□ 1.96
NIPSNAP1-201ENST00000216121 BABAM1Q9NWV8 329 aa27.28■■□□□ 1.96
NIPSNAP1-201ENST00000216121 SDSP20132 328 aa27.28■■□□□ 1.96
NIPSNAP1-201ENST00000216121 NUTM2GQ5VZR2 741 aa27.28■■□□□ 1.96
NIPSNAP1-201ENST00000216121 USP26Q9BXU7 913 aa27.27■■□□□ 1.96
NIPSNAP1-201ENST00000216121 RAB3GAP1Q15042 981 aa27.26■■□□□ 1.96
NIPSNAP1-201ENST00000216121 RTN4Q9NQC3 1192 aaKnown RBP27.26■■□□□ 1.96
NIPSNAP1-201ENST00000216121 MAP3K5Q99683 1374 aa27.26■■□□□ 1.96
NIPSNAP1-201ENST00000216121 FAM208AQ9UK61 1670 aaKnown RBP27.26■■□□□ 1.95
NIPSNAP1-201ENST00000216121 GNAI2P04899 355 aa27.26■■□□□ 1.95
NIPSNAP1-201ENST00000216121 IL17REQ8NFR9 667 aa27.26■■□□□ 1.95
NIPSNAP1-201ENST00000216121 FLIIQ13045 1269 aa27.25■■□□□ 1.95
NIPSNAP1-201ENST00000216121 RABEP1Q15276 862 aa27.25■■□□□ 1.95
NIPSNAP1-201ENST00000216121 TNPO1Q92973 898 aaKnown RBP27.25■■□□□ 1.95
NIPSNAP1-201ENST00000216121 APBB1O00213 710 aa27.25■■□□□ 1.95
NIPSNAP1-201ENST00000216121 OSBPL3Q9H4L5 887 aa27.25■■□□□ 1.95
NIPSNAP1-201ENST00000216121 CASC1Q6TDU7 716 aa27.24■■□□□ 1.95
NIPSNAP1-201ENST00000216121 HSP90AA1P07900 732 aaKnown RBP27.24■■□□□ 1.95
NIPSNAP1-201ENST00000216121 FSD2A1L4K1 749 aa27.23■■□□□ 1.95
NIPSNAP1-201ENST00000216121 TAF7Q15545 349 aaPredicted RBP27.23■■□□□ 1.95
NIPSNAP1-201ENST00000216121 GNAI3P08754 354 aa27.21■■□□□ 1.95
NIPSNAP1-201ENST00000216121 FKBP5Q13451 457 aaPredicted RBP27.21■■□□□ 1.95
NIPSNAP1-201ENST00000216121 GBP4Q96PP9 640 aa27.21■■□□□ 1.95
NIPSNAP1-201ENST00000216121 PHF8Q9UPP1 1060 aa27.2■■□□□ 1.95
NIPSNAP1-201ENST00000216121 LTV1Q96GA3 475 aaPredicted RBP27.2■■□□□ 1.94
NIPSNAP1-201ENST00000216121 CHD2O14647 1828 aaKnown RBP27.19■■□□□ 1.94
NIPSNAP1-201ENST00000216121 GOLGA6L3A6NEY3 463 aa27.19■■□□□ 1.94
NIPSNAP1-201ENST00000216121 PDE1AP54750 535 aa27.19■■□□□ 1.94
NIPSNAP1-201ENST00000216121 N4BP2Q86UW6 1770 aaPredicted RBP27.19■■□□□ 1.94
NIPSNAP1-201ENST00000216121 GZF1Q9H116 711 aaPredicted RBP27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms