RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 ZFP91Q96JP5 570 aaPredicted RBP16.08■□□□□ 0.17
TGFBR3-201ENST00000212355 PTCD1O75127 700 aaKnown RBP16.08■□□□□ 0.16
TGFBR3-201ENST00000212355 LRRFIP2Q9Y608 721 aaKnown RBP16.08■□□□□ 0.16
TGFBR3-201ENST00000212355 CCDC181Q5TID7 509 aa16.08■□□□□ 0.16
TGFBR3-201ENST00000212355 CCDC112Q8NEF3 446 aa16.08■□□□□ 0.16
TGFBR3-201ENST00000212355 SSFA2P28290 1259 aa16.08■□□□□ 0.16
TGFBR3-201ENST00000212355 KRT85P78386 507 aa16.08■□□□□ 0.16
TGFBR3-201ENST00000212355 RAI14Q9P0K7 980 aa16.08■□□□□ 0.16
TGFBR3-201ENST00000212355 WDR33Q9C0J8 1336 aaKnown RBP16.08■□□□□ 0.16
TGFBR3-201ENST00000212355 SYCP1Q15431 976 aa16.08■□□□□ 0.16
TGFBR3-201ENST00000212355 KLHL10Q6JEL2 608 aa16.08■□□□□ 0.16
TGFBR3-201ENST00000212355 TRMT1LQ7Z2T5 733 aaKnown RBP16.08■□□□□ 0.16
TGFBR3-201ENST00000212355 CCDC144CPQ8IYA2 1237 aa16.08■□□□□ 0.16
TGFBR3-201ENST00000212355 PKNOX2Q96KN3 472 aa16.08■□□□□ 0.16
TGFBR3-201ENST00000212355 CCT4P50991 539 aaKnown RBP16.07■□□□□ 0.16
TGFBR3-201ENST00000212355 RBM27Q9P2N5 1060 aaKnown RBP16.07■□□□□ 0.16
TGFBR3-201ENST00000212355 CHMP4BP1P59074 171 aa16.07■□□□□ 0.16
TGFBR3-201ENST00000212355 MPHOSPH8Q99549 860 aa16.07■□□□□ 0.16
TGFBR3-201ENST00000212355 ERC1Q8IUD2 1116 aa16.07■□□□□ 0.16
TGFBR3-201ENST00000212355 PAF1Q8N7H5 531 aa16.07■□□□□ 0.16
TGFBR3-201ENST00000212355 NSD3Q9BZ95 1437 aa16.07■□□□□ 0.16
TGFBR3-201ENST00000212355 RRBP1Q9P2E9 1410 aaKnown RBP16.07■□□□□ 0.16
TGFBR3-201ENST00000212355 FYCO1Q9BQS8 1478 aa16.07■□□□□ 0.16
TGFBR3-201ENST00000212355 LEKR1Q6ZMV7 388 aa16.07■□□□□ 0.16
TGFBR3-201ENST00000212355 ZSCAN29Q8IWY8 852 aaPredicted RBP16.07■□□□□ 0.16
TGFBR3-201ENST00000212355 CCDC8Q9H0W5 538 aaPredicted RBP16.07■□□□□ 0.16
TGFBR3-201ENST00000212355 NUP62CLQ9H1M0 184 aa16.07■□□□□ 0.16
TGFBR3-201ENST00000212355 ABCF2Q9UG63 623 aa16.07■□□□□ 0.16
TGFBR3-201ENST00000212355 SMG6Q86US8 1419 aaKnown RBP16.06■□□□□ 0.16
TGFBR3-201ENST00000212355 MPHOSPH10O00566 681 aaKnown RBP16.06■□□□□ 0.16
TGFBR3-201ENST00000212355 CDR1P51861 262 aa16.06■□□□□ 0.16
TGFBR3-201ENST00000212355 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.06■□□□□ 0.16
TGFBR3-201ENST00000212355 PDCL3Q9H2J4 239 aa16.06■□□□□ 0.16
TGFBR3-201ENST00000212355 HIP1O00291 1037 aa16.06■□□□□ 0.16
TGFBR3-201ENST00000212355 PDCP20941 246 aa16.06■□□□□ 0.16
TGFBR3-201ENST00000212355 CKAP2LQ8IYA6 745 aa16.06■□□□□ 0.16
TGFBR3-201ENST00000212355 TRMT1Q9NXH9 659 aaKnown RBP16.06■□□□□ 0.16
TGFBR3-201ENST00000212355 SCAPERQ9BY12 1400 aa16.06■□□□□ 0.16
TGFBR3-201ENST00000212355 TMPOP42166 694 aaKnown RBP16.05■□□□□ 0.16
TGFBR3-201ENST00000212355 SLC3A2P08195 630 aaKnown RBP16.05■□□□□ 0.16
TGFBR3-201ENST00000212355 MATR3P43243 847 aaKnown RBP eCLIP16.05■□□□□ 0.161e-6■■■■□ 19.3
TGFBR3-201ENST00000212355 MINDY4BA8MYZ0 360 aa16.04■□□□□ 0.16
TGFBR3-201ENST00000212355 CCDC102AQ96A19 550 aa16.04■□□□□ 0.16
TGFBR3-201ENST00000212355 CCT2P78371 535 aaKnown RBP16.04■□□□□ 0.16
TGFBR3-201ENST00000212355 SLFN5Q08AF3 891 aa16.04■□□□□ 0.16
TGFBR3-201ENST00000212355 C9orf84Q5VXU9 1444 aa16.04■□□□□ 0.16
TGFBR3-201ENST00000212355 TRIM22Q8IYM9 498 aa16.04■□□□□ 0.16
TGFBR3-201ENST00000212355 MYD88Q99836 296 aa16.04■□□□□ 0.16
TGFBR3-201ENST00000212355 LRP2BPQ9P2M1 347 aa16.04■□□□□ 0.16
TGFBR3-201ENST00000212355 MCM2P49736 904 aa16.03■□□□□ 0.16
TGFBR3-201ENST00000212355 ZNHIT6Q9NWK9 470 aaKnown RBP16.03■□□□□ 0.16
TGFBR3-201ENST00000212355 RDXP35241 583 aaKnown RBP16.03■□□□□ 0.16
TGFBR3-201ENST00000212355 CASKIN1Q8WXD9 1431 aa16.03■□□□□ 0.16
TGFBR3-201ENST00000212355 AEBP1Q8IUX7 1158 aa16.03■□□□□ 0.16
TGFBR3-201ENST00000212355 CPLX3Q8WVH0 158 aa16.03■□□□□ 0.16
TGFBR3-201ENST00000212355 RTEL1-TNFRSF6BF6WH68 1400 aa16.03■□□□□ 0.16
TGFBR3-201ENST00000212355 SSR1P43307 286 aaKnown RBP16.03■□□□□ 0.16
TGFBR3-201ENST00000212355 DUSP27Q5VZP5 1158 aa16.03■□□□□ 0.16
TGFBR3-201ENST00000212355 SPG7Q9UQ90 795 aa16.03■□□□□ 0.16
TGFBR3-201ENST00000212355 SYNJ1O43426 1573 aa16.02■□□□□ 0.16
TGFBR3-201ENST00000212355 ZNF219Q9P2Y4 722 aaPredicted RBP16.02■□□□□ 0.16
TGFBR3-201ENST00000212355 CFAP100Q494V2 611 aa16.02■□□□□ 0.16
TGFBR3-201ENST00000212355 CWC15Q9P013 229 aaKnown RBP16.02■□□□□ 0.16
TGFBR3-201ENST00000212355 SSH1Q8WYL5 1049 aa16.02■□□□□ 0.15
TGFBR3-201ENST00000212355 ESPNB1AK53 854 aa16.02■□□□□ 0.15
TGFBR3-201ENST00000212355 ERCC4Q92889 916 aaPredicted RBP16.02■□□□□ 0.15
TGFBR3-201ENST00000212355 BIN1O00499 593 aa16.01■□□□□ 0.15
TGFBR3-201ENST00000212355 WDR63Q8IWG1 891 aa16.01■□□□□ 0.15
TGFBR3-201ENST00000212355 KIAA1107Q9UPP5 1409 aa16.01■□□□□ 0.15
TGFBR3-201ENST00000212355 UBAC1Q9BSL1 405 aa16.01■□□□□ 0.15
TGFBR3-201ENST00000212355 TNNT1P13805 278 aa16■□□□□ 0.15
TGFBR3-201ENST00000212355 MPRIPQ6WCQ1 1025 aa16■□□□□ 0.15
TGFBR3-201ENST00000212355 NME9Q86XW9 330 aa16■□□□□ 0.15
TGFBR3-201ENST00000212355 PANK2Q9BZ23 570 aa16■□□□□ 0.15
TGFBR3-201ENST00000212355 TFIP11Q9UBB9 837 aaKnown RBP16■□□□□ 0.15
TGFBR3-201ENST00000212355 KIAA1328Q86T90 577 aa16■□□□□ 0.15
TGFBR3-201ENST00000212355 GNL3LQ9NVN8 582 aaKnown RBP16■□□□□ 0.15
TGFBR3-201ENST00000212355 SOGA3Q5TF21 947 aa16■□□□□ 0.15
TGFBR3-201ENST00000212355 FAM83GA6ND36 823 aa16■□□□□ 0.15
TGFBR3-201ENST00000212355 SPDYE4A6NLX3 237 aa16■□□□□ 0.15
TGFBR3-201ENST00000212355 ZNF830Q96NB3 372 aaPredicted RBP16■□□□□ 0.15
TGFBR3-201ENST00000212355 CDK13Q14004 1512 aaKnown RBP15.99■□□□□ 0.15
TGFBR3-201ENST00000212355 ANKRD1Q15327 319 aa15.99■□□□□ 0.15
TGFBR3-201ENST00000212355 CCDC191Q8NCU4 936 aa15.99■□□□□ 0.15
TGFBR3-201ENST00000212355 NACAP1Q9BZK3 213 aa15.99■□□□□ 0.15
TGFBR3-201ENST00000212355 NESP48681 1621 aa15.99■□□□□ 0.15
TGFBR3-201ENST00000212355 CALRP27797 417 aaKnown RBP15.99■□□□□ 0.15
TGFBR3-201ENST00000212355 EMILIN1Q9Y6C2 1016 aa15.99■□□□□ 0.15
TGFBR3-201ENST00000212355 POLR3GO15318 223 aaPredicted RBP15.99■□□□□ 0.15
TGFBR3-201ENST00000212355 USP25Q9UHP3 1055 aa15.99■□□□□ 0.15
TGFBR3-201ENST00000212355 METTL24Q5JXM2 366 aa15.98■□□□□ 0.15
TGFBR3-201ENST00000212355 CEP57L1Q8IYX8 460 aa15.98■□□□□ 0.15
TGFBR3-201ENST00000212355 GNAT3A8MTJ3 354 aa15.98■□□□□ 0.15
TGFBR3-201ENST00000212355 MX1P20591 662 aa15.98■□□□□ 0.15
TGFBR3-201ENST00000212355 EIF5P55010 431 aaKnown RBP15.98■□□□□ 0.15
TGFBR3-201ENST00000212355 AAMPQ13685 434 aa15.98■□□□□ 0.15
TGFBR3-201ENST00000212355 IGHDP01880 384 aa15.98■□□□□ 0.15
TGFBR3-201ENST00000212355 ZNF76P36508 570 aa15.98■□□□□ 0.15
TGFBR3-201ENST00000212355 SEPT7Q16181 437 aaKnown RBP15.98■□□□□ 0.15
TGFBR3-201ENST00000212355 UBA5Q9GZZ9 404 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms