RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 KCNH5Q8NCM2 988 aa13.9□□□□□ -0.18
DNMT3B-201ENST00000201963 H3BQV1 296 aa13.9□□□□□ -0.19
DNMT3B-201ENST00000201963 IFFO2Q5TF58 517 aa13.9□□□□□ -0.19
DNMT3B-201ENST00000201963 SF3A1Q15459 793 aaKnown RBP13.89□□□□□ -0.19
DNMT3B-201ENST00000201963 NSD3Q9BZ95 1437 aa13.89□□□□□ -0.19
DNMT3B-201ENST00000201963 ZNF428Q96B54 188 aa13.89□□□□□ -0.19
DNMT3B-201ENST00000201963 ABCC3O15438 1527 aa13.89□□□□□ -0.19
DNMT3B-201ENST00000201963 GLI2P10070 1586 aa13.89□□□□□ -0.19
DNMT3B-201ENST00000201963 SSH1Q8WYL5 1049 aa13.89□□□□□ -0.19
DNMT3B-201ENST00000201963 GPATCH3Q96I76 525 aa13.89□□□□□ -0.19
DNMT3B-201ENST00000201963 TRIM5Q9C035 493 aa13.88□□□□□ -0.19
DNMT3B-201ENST00000201963 KIF3AQ9Y496 699 aa13.88□□□□□ -0.19
DNMT3B-201ENST00000201963 ZNF530Q6P9A1 599 aaPredicted RBP13.88□□□□□ -0.19
DNMT3B-201ENST00000201963 PRDM15P57071 1507 aaPredicted RBP13.88□□□□□ -0.19
DNMT3B-201ENST00000201963 FBXW7Q969H0 707 aa13.87□□□□□ -0.19
DNMT3B-201ENST00000201963 BTG4Q9NY30 223 aa13.87□□□□□ -0.19
DNMT3B-201ENST00000201963 PRKAR2BP31323 418 aa13.87□□□□□ -0.19
DNMT3B-201ENST00000201963 HOMER1Q86YM7 354 aa13.87□□□□□ -0.19
DNMT3B-201ENST00000201963 BAG4O95429 457 aaKnown RBP13.87□□□□□ -0.19
DNMT3B-201ENST00000201963 SASS6Q6UVJ0 657 aa13.87□□□□□ -0.19
DNMT3B-201ENST00000201963 FAM184AQ8NB25 1140 aa13.87□□□□□ -0.19
DNMT3B-201ENST00000201963 DIP2CQ9Y2E4 1556 aa13.87□□□□□ -0.19
DNMT3B-201ENST00000201963 ZKSCAN1P17029 563 aaPredicted RBP13.86□□□□□ -0.19
DNMT3B-201ENST00000201963 TPD52L1Q16890 204 aaPredicted RBP13.86□□□□□ -0.19
DNMT3B-201ENST00000201963 CT47B1P0C2W7 299 aaPredicted RBP13.86□□□□□ -0.19
DNMT3B-201ENST00000201963 NLRP1Q9C000 1473 aa13.85□□□□□ -0.19
DNMT3B-201ENST00000201963 MCM2P49736 904 aa13.85□□□□□ -0.19
DNMT3B-201ENST00000201963 FKBP5Q13451 457 aaPredicted RBP13.85□□□□□ -0.19
DNMT3B-201ENST00000201963 PDCL2Q8N4E4 241 aa13.85□□□□□ -0.19
DNMT3B-201ENST00000201963 FAM177BA6PVY3 158 aa13.85□□□□□ -0.19
DNMT3B-201ENST00000201963 TNNQ9UQP3 1299 aa13.85□□□□□ -0.19
DNMT3B-201ENST00000201963 TTC21BQ7Z4L5 1316 aa13.85□□□□□ -0.19
DNMT3B-201ENST00000201963 PPIP5K1Q6PFW1 1433 aa13.85□□□□□ -0.19
DNMT3B-201ENST00000201963 KLHL40Q2TBA0 621 aa13.85□□□□□ -0.19
DNMT3B-201ENST00000201963 TWISTNBQ3B726 338 aaPredicted RBP13.85□□□□□ -0.19
DNMT3B-201ENST00000201963 DISP3Q9P2K9 1392 aa13.84□□□□□ -0.19
DNMT3B-201ENST00000201963 ERC2O15083 957 aa13.84□□□□□ -0.19
DNMT3B-201ENST00000201963 TRIM27P14373 513 aa13.84□□□□□ -0.19
DNMT3B-201ENST00000201963 RBM27Q9P2N5 1060 aaKnown RBP13.84□□□□□ -0.19
DNMT3B-201ENST00000201963 KDM2BQ8NHM5 1336 aa13.84□□□□□ -0.19
DNMT3B-201ENST00000201963 GCP02774 474 aa13.84□□□□□ -0.19
DNMT3B-201ENST00000201963 MAPK8IP2Q13387 824 aaPredicted RBP13.84□□□□□ -0.19
DNMT3B-201ENST00000201963 PTCD1O75127 700 aaKnown RBP13.84□□□□□ -0.19
DNMT3B-201ENST00000201963 MPRIPQ6WCQ1 1025 aa13.84□□□□□ -0.19
DNMT3B-201ENST00000201963 PRAG1Q86YV5 1406 aa13.83□□□□□ -0.19
DNMT3B-201ENST00000201963 PARD3Q8TEW0 1356 aa13.83□□□□□ -0.19
DNMT3B-201ENST00000201963 ACSBG1Q96GR2 724 aa13.83□□□□□ -0.2
DNMT3B-201ENST00000201963 RIMS1Q86UR5 1692 aaKnown RBP13.83□□□□□ -0.2
DNMT3B-201ENST00000201963 TPM3P06753 285 aa13.83□□□□□ -0.2
DNMT3B-201ENST00000201963 PLEKHO1Q53GL0 409 aaPredicted RBP13.83□□□□□ -0.2
DNMT3B-201ENST00000201963 HSP90AB2PQ58FF8 381 aa13.83□□□□□ -0.2
DNMT3B-201ENST00000201963 GOLGA6L1Q8N7Z2 621 aa13.83□□□□□ -0.2
DNMT3B-201ENST00000201963 RUFY2Q8WXA3 655 aa13.83□□□□□ -0.2
DNMT3B-201ENST00000201963 PLEKHG1Q9ULL1 1385 aa13.83□□□□□ -0.2
DNMT3B-201ENST00000201963 CCDC66A2RUB6 948 aa13.82□□□□□ -0.2
DNMT3B-201ENST00000201963 EXOC5O00471 708 aa13.82□□□□□ -0.2
DNMT3B-201ENST00000201963 TEX35Q5T0J7 233 aa13.82□□□□□ -0.2
DNMT3B-201ENST00000201963 LRRIQ1Q96JM4 1722 aa13.82□□□□□ -0.2
DNMT3B-201ENST00000201963 TMPOP42166 694 aaKnown RBP13.82□□□□□ -0.2
DNMT3B-201ENST00000201963 ANKRD24Q8TF21 1146 aa13.82□□□□□ -0.2
DNMT3B-201ENST00000201963 SPINK5Q9NQ38 1064 aaPredicted RBP13.82□□□□□ -0.2
DNMT3B-201ENST00000201963 USP25Q9UHP3 1055 aa13.82□□□□□ -0.2
DNMT3B-201ENST00000201963 ROBO2Q9HCK4 1378 aa13.82□□□□□ -0.2
DNMT3B-201ENST00000201963 LETM1O95202 739 aaPredicted RBP13.81□□□□□ -0.2
DNMT3B-201ENST00000201963 RLBP1P12271 317 aa13.81□□□□□ -0.2
DNMT3B-201ENST00000201963 USP21Q9UK80 565 aa13.81□□□□□ -0.2
DNMT3B-201ENST00000201963 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.81□□□□□ -0.2
DNMT3B-201ENST00000201963 ARHGEF40Q8TER5 1519 aa13.81□□□□□ -0.2
DNMT3B-201ENST00000201963 ABCA6Q8N139 1617 aa13.81□□□□□ -0.2
DNMT3B-201ENST00000201963 UPF3BQ9BZI7 483 aaKnown RBP13.81□□□□□ -0.2
DNMT3B-201ENST00000201963 WDR33Q9C0J8 1336 aaKnown RBP13.81□□□□□ -0.2
DNMT3B-201ENST00000201963 FOSBP53539 338 aa13.81□□□□□ -0.2
DNMT3B-201ENST00000201963 FAM98CQ17RN3 349 aaKnown RBP13.81□□□□□ -0.2
DNMT3B-201ENST00000201963 TBC1D9Q6ZT07 1266 aa13.81□□□□□ -0.2
DNMT3B-201ENST00000201963 CCDC112Q8NEF3 446 aa13.81□□□□□ -0.2
DNMT3B-201ENST00000201963 GDPD2Q9HCC8 539 aa13.81□□□□□ -0.2
DNMT3B-201ENST00000201963 A2ML1A8K2U0 1454 aa13.81□□□□□ -0.2
DNMT3B-201ENST00000201963 HSPA1LP34931 641 aa13.8□□□□□ -0.2
DNMT3B-201ENST00000201963 DYNC1I1O14576 645 aa13.8□□□□□ -0.2
DNMT3B-201ENST00000201963 CABP4P57796 275 aa13.8□□□□□ -0.2
DNMT3B-201ENST00000201963 AIMP1Q12904 312 aaKnown RBP13.8□□□□□ -0.2
DNMT3B-201ENST00000201963 ZSCAN23Q3MJ62 389 aa13.8□□□□□ -0.2
DNMT3B-201ENST00000201963 MNS1Q8NEH6 495 aa13.8□□□□□ -0.2
DNMT3B-201ENST00000201963 THUMPD2Q9BTF0 503 aaKnown RBP13.8□□□□□ -0.2
DNMT3B-201ENST00000201963 OFD1O75665 1012 aa13.79□□□□□ -0.2
DNMT3B-201ENST00000201963 PER1O15534 1290 aaPredicted RBP13.79□□□□□ -0.2
DNMT3B-201ENST00000201963 CCDC192P0DO97 292 aa13.79□□□□□ -0.2
DNMT3B-201ENST00000201963 CREBRFQ8IUR6 639 aa13.79□□□□□ -0.2
DNMT3B-201ENST00000201963 TSPYL4Q9UJ04 414 aa13.79□□□□□ -0.2
DNMT3B-201ENST00000201963 CLTCQ00610 1675 aaKnown RBP13.79□□□□□ -0.2
DNMT3B-201ENST00000201963 GPS2Q13227 327 aa13.78□□□□□ -0.2
DNMT3B-201ENST00000201963 BMP2KLQ5H9B9 411 aa13.78□□□□□ -0.2
DNMT3B-201ENST00000201963 FAM182BQ5T319 152 aa13.78□□□□□ -0.2
DNMT3B-201ENST00000201963 SPDYE4A6NLX3 237 aa13.78□□□□□ -0.2
DNMT3B-201ENST00000201963 FYB1O15117 783 aa13.78□□□□□ -0.2
DNMT3B-201ENST00000201963 SPG7Q9UQ90 795 aa13.78□□□□□ -0.2
DNMT3B-201ENST00000201963 BRINP3Q76B58 766 aa13.78□□□□□ -0.2
DNMT3B-201ENST00000201963 GORABQ5T7V8 394 aa13.77□□□□□ -0.2
DNMT3B-201ENST00000201963 ARGLU1Q9NWB6 273 aaPredicted RBP13.77□□□□□ -0.2
DNMT3B-201ENST00000201963 PPP4R3BQ5MIZ7 849 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms