RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.44■■□□□ 1.5
PPP1R3F-201ENST00000055335 CFAP44Q96MT7 982 aa24.44■■□□□ 1.5
PPP1R3F-201ENST00000055335 TULP4Q9NRJ4 1543 aa24.43■■□□□ 1.5
PPP1R3F-201ENST00000055335 F6X3S4 739 aa24.43■■□□□ 1.5
PPP1R3F-201ENST00000055335 CBX1P83916 185 aa24.43■■□□□ 1.5
PPP1R3F-201ENST00000055335 ANKRD44Q8N8A2 993 aa24.43■■□□□ 1.5
PPP1R3F-201ENST00000055335 NPATQ14207 1427 aa24.42■■□□□ 1.5
PPP1R3F-201ENST00000055335 MCM10Q7L590 875 aa24.42■■□□□ 1.5
PPP1R3F-201ENST00000055335 WAPLQ7Z5K2 1190 aa24.42■■□□□ 1.5
PPP1R3F-201ENST00000055335 PALD1Q9ULE6 856 aa24.42■■□□□ 1.5
PPP1R3F-201ENST00000055335 NME9Q86XW9 330 aa24.41■■□□□ 1.5
PPP1R3F-201ENST00000055335 A0A0U1RQG5 324 aaPredicted RBP24.41■■□□□ 1.5
PPP1R3F-201ENST00000055335 PRDM4Q9UKN5 801 aa24.41■■□□□ 1.5
PPP1R3F-201ENST00000055335 BCL11BQ9C0K0 894 aaPredicted RBP24.4■■□□□ 1.5
PPP1R3F-201ENST00000055335 SYAP1Q96A49 352 aaPredicted RBP24.4■■□□□ 1.5
PPP1R3F-201ENST00000055335 NECTIN2Q92692 538 aa24.39■■□□□ 1.5
PPP1R3F-201ENST00000055335 RPGRIP1LQ68CZ1 1315 aa24.39■■□□□ 1.5
PPP1R3F-201ENST00000055335 SLC4A2P04920 1241 aa24.39■■□□□ 1.5
PPP1R3F-201ENST00000055335 BRPF1P55201 1214 aaPredicted RBP24.39■■□□□ 1.5
PPP1R3F-201ENST00000055335 RPAP2Q8IXW5 612 aaPredicted RBP24.38■■□□□ 1.49
PPP1R3F-201ENST00000055335 MED14O60244 1454 aa24.38■■□□□ 1.49
PPP1R3F-201ENST00000055335 HCLS1P14317 486 aaPredicted RBP24.38■■□□□ 1.49
PPP1R3F-201ENST00000055335 NRXN1Q9ULB1 1477 aa24.38■■□□□ 1.49
PPP1R3F-201ENST00000055335 ADGRB1O14514 1584 aa24.37■■□□□ 1.49
PPP1R3F-201ENST00000055335 USP48Q86UV5 1035 aa24.37■■□□□ 1.49
PPP1R3F-201ENST00000055335 MCM5P33992 734 aa24.37■■□□□ 1.49
PPP1R3F-201ENST00000055335 MCCP23508 829 aa24.36■■□□□ 1.49
PPP1R3F-201ENST00000055335 AEBP1Q8IUX7 1158 aa24.36■■□□□ 1.49
PPP1R3F-201ENST00000055335 MAP4K4O95819 1239 aaPredicted RBP24.36■■□□□ 1.49
PPP1R3F-201ENST00000055335 PTCH1Q13635 1447 aa24.36■■□□□ 1.49
PPP1R3F-201ENST00000055335 PDE1AP54750 535 aa24.36■■□□□ 1.49
PPP1R3F-201ENST00000055335 PUS7Q96PZ0 661 aaKnown RBP24.36■■□□□ 1.49
PPP1R3F-201ENST00000055335 ZCCHC11Q5TAX3 1644 aaKnown RBP24.35■■□□□ 1.49
PPP1R3F-201ENST00000055335 CHMP3Q9Y3E7 222 aa24.35■■□□□ 1.49
PPP1R3F-201ENST00000055335 COL3A1P02461 1466 aaPredicted RBP24.35■■□□□ 1.49
PPP1R3F-201ENST00000055335 MSH6P52701 1360 aa24.35■■□□□ 1.49
PPP1R3F-201ENST00000055335 EFCAB6Q5THR3 1501 aa24.35■■□□□ 1.49
PPP1R3F-201ENST00000055335 ADCY5O95622 1261 aa24.35■■□□□ 1.49
PPP1R3F-201ENST00000055335 SPC24Q8NBT2 197 aa24.35■■□□□ 1.49
PPP1R3F-201ENST00000055335 LMOD3Q0VAK6 560 aa24.34■■□□□ 1.49
PPP1R3F-201ENST00000055335 SPDYE4A6NLX3 237 aa24.34■■□□□ 1.49
PPP1R3F-201ENST00000055335 NOLC1Q14978 699 aaKnown RBP eCLIP24.34■■□□□ 1.49
PPP1R3F-201ENST00000055335 NCKAP5LQ9HCH0 1330 aa24.34■■□□□ 1.49
PPP1R3F-201ENST00000055335 FIBPO43427 364 aa24.33■■□□□ 1.49
PPP1R3F-201ENST00000055335 HMMRO75330 724 aa24.33■■□□□ 1.49
PPP1R3F-201ENST00000055335 BRD1O95696 1058 aa24.33■■□□□ 1.49
PPP1R3F-201ENST00000055335 LRRC7Q96NW7 1537 aa24.33■■□□□ 1.49
PPP1R3F-201ENST00000055335 MTERF4Q7Z6M4 381 aaKnown RBP24.33■■□□□ 1.49
PPP1R3F-201ENST00000055335 RAPGEF3O95398 923 aa24.33■■□□□ 1.48
PPP1R3F-201ENST00000055335 ZNF853P0CG23 659 aa24.33■■□□□ 1.48
PPP1R3F-201ENST00000055335 SULT6B1Q6IMI4 303 aa24.33■■□□□ 1.48
PPP1R3F-201ENST00000055335 IGSF3O75054 1194 aa24.32■■□□□ 1.48
PPP1R3F-201ENST00000055335 MYO3AQ8NEV4 1616 aa24.32■■□□□ 1.48
PPP1R3F-201ENST00000055335 PPRC1Q5VV67 1664 aaKnown RBP24.31■■□□□ 1.48
PPP1R3F-201ENST00000055335 NUTM2FA1L443 756 aa24.31■■□□□ 1.48
PPP1R3F-201ENST00000055335 IL13P35225 146 aa24.31■■□□□ 1.48
PPP1R3F-201ENST00000055335 CNPY2Q9Y2B0 182 aa24.31■■□□□ 1.48
PPP1R3F-201ENST00000055335 PIK3R4Q99570 1358 aa24.31■■□□□ 1.48
PPP1R3F-201ENST00000055335 PHF14O94880 888 aa24.31■■□□□ 1.48
PPP1R3F-201ENST00000055335 FAM135BQ49AJ0 1406 aa24.3■■□□□ 1.48
PPP1R3F-201ENST00000055335 DEPDC5O75140 1603 aa24.3■■□□□ 1.48
PPP1R3F-201ENST00000055335 SETBP1Q9Y6X0 1596 aa24.3■■□□□ 1.48
PPP1R3F-201ENST00000055335 ADGRB3O60242 1522 aa24.3■■□□□ 1.48
PPP1R3F-201ENST00000055335 G2E3Q7L622 706 aa24.3■■□□□ 1.48
PPP1R3F-201ENST00000055335 IL1RAPL2Q9NP60 686 aa24.3■■□□□ 1.48
PPP1R3F-201ENST00000055335 PPP4R3BQ5MIZ7 849 aa24.29■■□□□ 1.48
PPP1R3F-201ENST00000055335 ESYT1Q9BSJ8 1104 aa24.29■■□□□ 1.48
PPP1R3F-201ENST00000055335 CCDC94Q9BW85 323 aaPredicted RBP24.29■■□□□ 1.48
PPP1R3F-201ENST00000055335 PODXL2Q9NZ53 605 aa24.29■■□□□ 1.48
PPP1R3F-201ENST00000055335 GLI2P10070 1586 aa24.29■■□□□ 1.48
PPP1R3F-201ENST00000055335 VWDEQ8N2E2 1590 aa24.29■■□□□ 1.48
PPP1R3F-201ENST00000055335 MYRIPQ8NFW9 859 aa24.28■■□□□ 1.48
PPP1R3F-201ENST00000055335 PNPLA6Q8IY17 1366 aa24.28■■□□□ 1.48
PPP1R3F-201ENST00000055335 RTL1A6NKG5 1358 aa24.28■■□□□ 1.48
PPP1R3F-201ENST00000055335 GIMAP6Q6P9H5 292 aa24.28■■□□□ 1.48
PPP1R3F-201ENST00000055335 SMAP1Q8IYB5 467 aaPredicted RBP24.27■■□□□ 1.48
PPP1R3F-201ENST00000055335 COG3Q96JB2 828 aa24.27■■□□□ 1.48
PPP1R3F-201ENST00000055335 CHD1O14646 1710 aa24.26■■□□□ 1.47
PPP1R3F-201ENST00000055335 KIF3AQ9Y496 699 aa24.26■■□□□ 1.47
PPP1R3F-201ENST00000055335 MROH1Q8NDA8 1641 aa24.25■■□□□ 1.47
PPP1R3F-201ENST00000055335 UNC5CLQ8IV45 518 aa24.25■■□□□ 1.47
PPP1R3F-201ENST00000055335 DDX54Q8TDD1 881 aaKnown RBP24.25■■□□□ 1.47
PPP1R3F-201ENST00000055335 SRCIN1Q9C0H9 1055 aa24.25■■□□□ 1.47
PPP1R3F-201ENST00000055335 MX1P20591 662 aa24.24■■□□□ 1.47
PPP1R3F-201ENST00000055335 MCM2P49736 904 aa24.24■■□□□ 1.47
PPP1R3F-201ENST00000055335 RIMS2Q9UQ26 1411 aa24.24■■□□□ 1.47
PPP1R3F-201ENST00000055335 YTHDC2Q9H6S0 1430 aaKnown RBP24.23■■□□□ 1.47
PPP1R3F-201ENST00000055335 FBXO31Q5XUX0 539 aaPredicted RBP24.23■■□□□ 1.47
PPP1R3F-201ENST00000055335 NUTM1Q86Y26 1132 aa24.23■■□□□ 1.47
PPP1R3F-201ENST00000055335 PIBF1Q8WXW3 757 aa24.23■■□□□ 1.47
PPP1R3F-201ENST00000055335 LRRCC1Q9C099 1032 aa24.23■■□□□ 1.47
PPP1R3F-201ENST00000055335 WDR33Q9C0J8 1336 aaKnown RBP24.23■■□□□ 1.47
PPP1R3F-201ENST00000055335 CPA1P15085 419 aa24.23■■□□□ 1.47
PPP1R3F-201ENST00000055335 ZNF710Q8N1W2 664 aa24.23■■□□□ 1.47
PPP1R3F-201ENST00000055335 ATP10DQ9P241 1426 aa24.22■■□□□ 1.47
PPP1R3F-201ENST00000055335 USP32Q8NFA0 1604 aa24.22■■□□□ 1.47
PPP1R3F-201ENST00000055335 CHMLP26374 656 aa24.21■■□□□ 1.47
PPP1R3F-201ENST00000055335 NPM1P06748 294 aaKnown RBP eCLIP24.21■■□□□ 1.47
PPP1R3F-201ENST00000055335 HMGN5P82970 282 aaKnown RBP24.21■■□□□ 1.47
PPP1R3F-201ENST00000055335 FKBP5Q13451 457 aaPredicted RBP24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms