RNA–Protein interactions for RNA: ENST00000013034.3

NME1-201, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 3 BASIC

Gene NME1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-201ENST00000013034 TFCP2L1Q9NZI6 479 aa15.8■□□□□ 0.12
NME1-201ENST00000013034 MEGF6O75095 1541 aa15.79■□□□□ 0.12
NME1-201ENST00000013034 GIGYF1O75420 1035 aaPredicted RBP15.79■□□□□ 0.12
NME1-201ENST00000013034 SHANK3Q9BYB0 1731 aa15.79■□□□□ 0.12
NME1-201ENST00000013034 MAP3K19Q56UN5 1328 aa15.78■□□□□ 0.12
NME1-201ENST00000013034 SYTL4Q96C24 671 aaPredicted RBP15.78■□□□□ 0.12
NME1-201ENST00000013034 HOXC9P31274 260 aa15.77■□□□□ 0.12
NME1-201ENST00000013034 PRIM1P49642 420 aaKnown RBP15.77■□□□□ 0.12
NME1-201ENST00000013034 PELP1Q8IZL8 1130 aaKnown RBP15.77■□□□□ 0.12
NME1-201ENST00000013034 LTV1Q96GA3 475 aaPredicted RBP15.77■□□□□ 0.12
NME1-201ENST00000013034 COG3Q96JB2 828 aa15.77■□□□□ 0.12
NME1-201ENST00000013034 NLGN2Q8NFZ4 835 aa15.76■□□□□ 0.11
NME1-201ENST00000013034 CCNL1Q9UK58 526 aaPredicted RBP15.76■□□□□ 0.11
NME1-201ENST00000013034 USP47Q96K76 1375 aa15.75■□□□□ 0.11
NME1-201ENST00000013034 AMPHP49418 695 aa15.75■□□□□ 0.11
NME1-201ENST00000013034 ZCRB1Q8TBF4 217 aaKnown RBP15.75■□□□□ 0.11
NME1-201ENST00000013034 SMG6Q86US8 1419 aaKnown RBP15.75■□□□□ 0.11
NME1-201ENST00000013034 CGNL1Q0VF96 1302 aa15.74■□□□□ 0.11
NME1-201ENST00000013034 GRIN3BO60391 1043 aa15.74■□□□□ 0.11
NME1-201ENST00000013034 KCNQ4P56696 695 aa15.74■□□□□ 0.11
NME1-201ENST00000013034 TONSLQ96HA7 1378 aa15.74■□□□□ 0.11
NME1-201ENST00000013034 GOLGB1Q14789 3259 aaKnown RBP15.73■□□□□ 0.11
NME1-201ENST00000013034 SLC24A1O60721 1099 aa15.72■□□□□ 0.11
NME1-201ENST00000013034 HMGB2P26583 209 aaKnown RBP15.72■□□□□ 0.11
NME1-201ENST00000013034 KAT6BQ8WYB5 2073 aa15.71■□□□□ 0.11
NME1-201ENST00000013034 C5P01031 1676 aa15.71■□□□□ 0.11
NME1-201ENST00000013034 TESK2Q96S53 571 aa15.71■□□□□ 0.11
NME1-201ENST00000013034 MSH5O43196 834 aa15.7■□□□□ 0.1
NME1-201ENST00000013034 YBX3P16989 372 aaKnown RBP eCLIP15.7■□□□□ 0.12e-8■■■□□ 16.9
NME1-201ENST00000013034 CCER1Q8TC90 406 aaPredicted RBP15.7■□□□□ 0.1
NME1-201ENST00000013034 RAPGEF4Q8WZA2 1011 aa15.7■□□□□ 0.1
NME1-201ENST00000013034 RGPD2P0DJD1 1756 aa15.7■□□□□ 0.1
NME1-201ENST00000013034 PCDH11XQ9BZA7 1347 aa15.69■□□□□ 0.1
NME1-201ENST00000013034 PCDH11YQ9BZA8 1340 aa15.69■□□□□ 0.1
NME1-201ENST00000013034 COL23A1Q86Y22 540 aaPredicted RBP15.69■□□□□ 0.1
NME1-201ENST00000013034 KIF24Q5T7B8 1368 aa15.68■□□□□ 0.1
NME1-201ENST00000013034 PALLDQ8WX93 1383 aa15.68■□□□□ 0.1
NME1-201ENST00000013034 NBPF6Q5VWK0 638 aa15.68■□□□□ 0.1
NME1-201ENST00000013034 FLAD1Q8NFF5 587 aa15.68■□□□□ 0.1
NME1-201ENST00000013034 NBPF4Q96M43 638 aa15.68■□□□□ 0.1
NME1-201ENST00000013034 ATP10DQ9P241 1426 aa15.68■□□□□ 0.1
NME1-201ENST00000013034 INSRP06213 1382 aa15.67■□□□□ 0.1
NME1-201ENST00000013034 FLT4P35916 1363 aa15.67■□□□□ 0.1
NME1-201ENST00000013034 TATP17735 454 aaPredicted RBP15.67■□□□□ 0.1
NME1-201ENST00000013034 MSL1Q68DK7 614 aa15.67■□□□□ 0.1
NME1-201ENST00000013034 CD2APQ9Y5K6 639 aa15.67■□□□□ 0.1
NME1-201ENST00000013034 NSD3Q9BZ95 1437 aa15.67■□□□□ 0.1
NME1-201ENST00000013034 ST20-MTHFSA0A0A6YYL1 179 aa15.66■□□□□ 0.1
NME1-201ENST00000013034 FBLN1P23142 703 aa15.66■□□□□ 0.1
NME1-201ENST00000013034 RRS1Q15050 365 aaKnown RBP15.66■□□□□ 0.1
NME1-201ENST00000013034 USHBP1Q8N6Y0 703 aa15.66■□□□□ 0.1
NME1-201ENST00000013034 ADCY9O60503 1353 aa15.65■□□□□ 0.1
NME1-201ENST00000013034 CLSPNQ9HAW4 1339 aa15.65■□□□□ 0.1
NME1-201ENST00000013034 C4BP0C0L5 1744 aa15.64■□□□□ 0.09
NME1-201ENST00000013034 GGNBP2Q9H3C7 697 aa15.64■□□□□ 0.09
NME1-201ENST00000013034 TAF1LQ8IZX4 1826 aa15.64■□□□□ 0.09
NME1-201ENST00000013034 PKD1L3Q7Z443 1732 aa15.63■□□□□ 0.09
NME1-201ENST00000013034 TOGARAM1Q9Y4F4 1720 aa15.63■□□□□ 0.09
NME1-201ENST00000013034 FYB1O15117 783 aa15.63■□□□□ 0.09
NME1-201ENST00000013034 SMARCC1Q92922 1105 aaPredicted RBP15.63■□□□□ 0.09
NME1-201ENST00000013034 KIF20BQ96Q89 1820 aa15.63■□□□□ 0.09
NME1-201ENST00000013034 NCAPD2Q15021 1401 aa15.62■□□□□ 0.09
NME1-201ENST00000013034 AK7Q96M32 723 aa15.62■□□□□ 0.09
NME1-201ENST00000013034 CEP350Q5VT06 3117 aa15.61■□□□□ 0.09
NME1-201ENST00000013034 TMF1P82094 1093 aa15.61■□□□□ 0.09
NME1-201ENST00000013034 IFFO2Q5TF58 517 aa15.61■□□□□ 0.09
NME1-201ENST00000013034 GPBP1L1Q9HC44 474 aaPredicted RBP15.61■□□□□ 0.09
NME1-201ENST00000013034 CYP27B1O15528 508 aa15.6■□□□□ 0.09
NME1-201ENST00000013034 HSP90AB2PQ58FF8 381 aa15.6■□□□□ 0.09
NME1-201ENST00000013034 MPRIPQ6WCQ1 1025 aa15.6■□□□□ 0.09
NME1-201ENST00000013034 UBR3Q6ZT12 1888 aa15.59■□□□□ 0.09
NME1-201ENST00000013034 CICQ96RK0 1608 aaPredicted RBP15.58■□□□□ 0.09
NME1-201ENST00000013034 SSFA2P28290 1259 aa15.58■□□□□ 0.08
NME1-201ENST00000013034 IGSF1Q8N6C5 1336 aa15.58■□□□□ 0.08
NME1-201ENST00000013034 ANKRD26Q9UPS8 1709 aa15.57■□□□□ 0.08
NME1-201ENST00000013034 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.57■□□□□ 0.08
NME1-201ENST00000013034 PHF14O94880 888 aa15.57■□□□□ 0.08
NME1-201ENST00000013034 CDCA8Q53HL2 280 aa15.57■□□□□ 0.08
NME1-201ENST00000013034 ITGB4P16144 1822 aa15.57■□□□□ 0.08
NME1-201ENST00000013034 HSPA6P17066 643 aa15.56■□□□□ 0.08
NME1-201ENST00000013034 NKX1-1Q15270 411 aaPredicted RBP15.56■□□□□ 0.08
NME1-201ENST00000013034 AMIGO3Q86WK7 504 aa15.56■□□□□ 0.08
NME1-201ENST00000013034 MAP2P11137 1827 aaKnown RBP15.55■□□□□ 0.08
NME1-201ENST00000013034 PIGBQ92521 554 aa15.55■□□□□ 0.08
NME1-201ENST00000013034 SPG7Q9UQ90 795 aa15.55■□□□□ 0.08
NME1-201ENST00000013034 PLEKHG2Q9H7P9 1386 aa15.54■□□□□ 0.08
NME1-201ENST00000013034 LOC102724428A0A0B4J2F2 783 aa15.54■□□□□ 0.08
NME1-201ENST00000013034 SIK1P57059 783 aa15.54■□□□□ 0.08
NME1-201ENST00000013034 EMILIN1Q9Y6C2 1016 aa15.54■□□□□ 0.08
NME1-201ENST00000013034 LINC00116Q8NCU8 138 aa15.53■□□□□ 0.08
NME1-201ENST00000013034 ZNF526Q8TF50 670 aaPredicted RBP15.53■□□□□ 0.08
NME1-201ENST00000013034 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.53■□□□□ 0.084e-7■□□□□ 9.1
NME1-201ENST00000013034 TMOD3Q9NYL9 352 aa15.52■□□□□ 0.08
NME1-201ENST00000013034 GNPATO15228 680 aa15.51■□□□□ 0.07
NME1-201ENST00000013034 PXDNLA1KZ92 1463 aa15.51■□□□□ 0.07
NME1-201ENST00000013034 KDRP35968 1356 aa15.5■□□□□ 0.07
NME1-201ENST00000013034 WASHC2AQ641Q2 1341 aa15.5■□□□□ 0.07
NME1-201ENST00000013034 SMIM5Q71RC9 77 aa15.49■□□□□ 0.07
NME1-201ENST00000013034 CARD14Q9BXL6 1004 aa15.49■□□□□ 0.07
NME1-201ENST00000013034 WWC3Q9ULE0 1092 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 158.7 ms