RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Gm21698A0A087WQP8 267 aa32.75■■■□□ 2.83
Tpm1-216ENSMUST00000113707 Gm21671G3UY31 267 aa32.75■■■□□ 2.83
Tpm1-216ENSMUST00000113707 Rlbp1Q9Z275 317 aa32.75■■■□□ 2.83
Tpm1-216ENSMUST00000113707 MarsQ68FL6 902 aaKnown RBP32.74■■■□□ 2.83
Tpm1-216ENSMUST00000113707 Ppp1r37Q8BKR5 712 aa32.74■■■□□ 2.83
Tpm1-216ENSMUST00000113707 Card10P58660 1021 aa32.73■■■□□ 2.83
Tpm1-216ENSMUST00000113707 Bcl9lQ67FY2 1494 aa32.72■■■□□ 2.83
Tpm1-216ENSMUST00000113707 1700019A02RikA0A087WPV9 146 aa32.72■■■□□ 2.83
Tpm1-216ENSMUST00000113707 Chl1P70232 1209 aa32.72■■■□□ 2.83
Tpm1-216ENSMUST00000113707 Abca15E9PWH4 1668 aa32.72■■■□□ 2.83
Tpm1-216ENSMUST00000113707 TkfcQ8VC30 578 aa32.71■■■□□ 2.83
Tpm1-216ENSMUST00000113707 Myo5bP21271 1818 aa32.71■■■□□ 2.83
Tpm1-216ENSMUST00000113707 B4galnt3Q6L8S8 986 aa32.71■■■□□ 2.83
Tpm1-216ENSMUST00000113707 Foxp4Q9DBY0 795 aaKnown RBP32.71■■■□□ 2.83
Tpm1-216ENSMUST00000113707 Simc1E9Q6E9 1354 aa32.7■■■□□ 2.83
Tpm1-216ENSMUST00000113707 Chmp4bQ9D8B3 224 aaKnown RBP32.69■■■□□ 2.82
Tpm1-216ENSMUST00000113707 MvpQ9EQK5 861 aa32.69■■■□□ 2.82
Tpm1-216ENSMUST00000113707 Col15a1O35206 1367 aa32.69■■■□□ 2.82
Tpm1-216ENSMUST00000113707 Abcc12Q80WJ6 1366 aa32.68■■■□□ 2.82
Tpm1-216ENSMUST00000113707 Nutm1Q8BHP2 1126 aa32.67■■■□□ 2.82
Tpm1-216ENSMUST00000113707 Dbr1Q923B1 550 aa32.67■■■□□ 2.82
Tpm1-216ENSMUST00000113707 Pibf1E9Q6K3 756 aa32.67■■■□□ 2.82
Tpm1-216ENSMUST00000113707 Ankrd44B2RXR6 993 aa32.66■■■□□ 2.82
Tpm1-216ENSMUST00000113707 OptnQ8K3K8 584 aa32.66■■■□□ 2.82
Tpm1-216ENSMUST00000113707 Ric3Q8BPM6 367 aa32.65■■■□□ 2.82
Tpm1-216ENSMUST00000113707 Kif24Q6NWW5 1356 aa32.64■■■□□ 2.82
Tpm1-216ENSMUST00000113707 Atp10bB1AWN4 1474 aa32.64■■■□□ 2.82
Tpm1-216ENSMUST00000113707 CrklP47941 303 aa32.64■■■□□ 2.82
Tpm1-216ENSMUST00000113707 Hs1bp3Q3TC93 395 aa32.64■■■□□ 2.82
Tpm1-216ENSMUST00000113707 Cadps2Q8BYR5 1297 aa32.64■■■□□ 2.82
Tpm1-216ENSMUST00000113707 Msh6P54276 1358 aaKnown RBP32.64■■■□□ 2.82
Tpm1-216ENSMUST00000113707 Gm10471E9Q1C7 252 aa32.62■■■□□ 2.81
Tpm1-216ENSMUST00000113707 Atl3Q91YH5 541 aa32.62■■■□□ 2.81
Tpm1-216ENSMUST00000113707 Aox2Q5SGK3 1345 aa32.61■■■□□ 2.81
Tpm1-216ENSMUST00000113707 Q3TQI7 289 aaKnown RBP32.59■■■□□ 2.81
Tpm1-216ENSMUST00000113707 Pak3Q61036 559 aa32.59■■■□□ 2.81
Tpm1-216ENSMUST00000113707 Cyb5rlB1AS42 316 aa32.59■■■□□ 2.81
Tpm1-216ENSMUST00000113707 Atf5O70191 283 aa32.57■■■□□ 2.8
Tpm1-216ENSMUST00000113707 Armcx1Q9CX83 456 aa32.55■■■□□ 2.8
Tpm1-216ENSMUST00000113707 Sv2bQ8BG39 683 aa32.54■■■□□ 2.8
Tpm1-216ENSMUST00000113707 ZgpatQ8VDM1 511 aa32.54■■■□□ 2.8
Tpm1-216ENSMUST00000113707 FocadA2AKG8 1798 aa32.54■■■□□ 2.8
Tpm1-216ENSMUST00000113707 Slit1Q80TR4 1531 aa32.54■■■□□ 2.8
Tpm1-216ENSMUST00000113707 Egfem1Q8C088 590 aa32.53■■■□□ 2.8
Tpm1-216ENSMUST00000113707 Aldh1l2Q8K009 923 aa32.53■■■□□ 2.8
Tpm1-216ENSMUST00000113707 HdgfP51859 237 aaKnown RBP32.52■■■□□ 2.8
Tpm1-216ENSMUST00000113707 ThemisQ8BGW0 636 aa32.52■■■□□ 2.8
Tpm1-216ENSMUST00000113707 Aifm3Q3TY86 605 aa32.51■■■□□ 2.79
Tpm1-216ENSMUST00000113707 Cluap1Q8R3P7 413 aa32.51■■■□□ 2.79
Tpm1-216ENSMUST00000113707 Chpf2Q3UU43 768 aa32.5■■■□□ 2.79
Tpm1-216ENSMUST00000113707 Zranb3Q6NZP1 1069 aa32.5■■■□□ 2.79
Tpm1-216ENSMUST00000113707 AU019823E9PUQ3 292 aa32.48■■■□□ 2.79
Tpm1-216ENSMUST00000113707 Cyp2d12Q8BVD2 504 aa32.48■■■□□ 2.79
Tpm1-216ENSMUST00000113707 RgmbQ7TQ33 436 aa32.47■■■□□ 2.79
Tpm1-216ENSMUST00000113707 Eif4a1P60843 406 aaKnown RBP32.46■■■□□ 2.79
Tpm1-216ENSMUST00000113707 Dlg5E9Q9R9 1921 aa32.46■■■□□ 2.79
Tpm1-216ENSMUST00000113707 Plekhd1B2RPU2 505 aa32.46■■■□□ 2.79
Tpm1-216ENSMUST00000113707 Tnks1bp1P58871 1720 aa32.45■■■□□ 2.79
Tpm1-216ENSMUST00000113707 Btbd11Q6GQW0 1109 aa32.45■■■□□ 2.79
Tpm1-216ENSMUST00000113707 Aplp1Q03157 653 aa32.44■■■□□ 2.78
Tpm1-216ENSMUST00000113707 Txnrd1Q9JMH6 613 aa32.44■■■□□ 2.78
Tpm1-216ENSMUST00000113707 Pdzd9Q9D9M4 266 aa32.44■■■□□ 2.78
Tpm1-216ENSMUST00000113707 Tns2Q8CGB6 1400 aa32.42■■■□□ 2.78
Tpm1-216ENSMUST00000113707 Fam83gQ5SWY7 812 aa32.42■■■□□ 2.78
Tpm1-216ENSMUST00000113707 Phf23Q8BSN5 401 aa32.42■■■□□ 2.78
Tpm1-216ENSMUST00000113707 Nkx2-3P97334 362 aa32.41■■■□□ 2.78
Tpm1-216ENSMUST00000113707 Wwc1Q5SXA9 1104 aa32.41■■■□□ 2.78
Tpm1-216ENSMUST00000113707 Col1a2Q01149 1372 aa32.4■■■□□ 2.78
Tpm1-216ENSMUST00000113707 Cdhr2E9Q7P9 1308 aa32.4■■■□□ 2.78
Tpm1-216ENSMUST00000113707 Ppp2r3aB2RXC8 1150 aa32.4■■■□□ 2.78
Tpm1-216ENSMUST00000113707 4930572O03RikQ8C5Y0 211 aa32.4■■■□□ 2.78
Tpm1-216ENSMUST00000113707 Phkg2Q9DB30 406 aa32.4■■■□□ 2.78
Tpm1-216ENSMUST00000113707 Cnksr1A2A9K7 700 aa32.4■■■□□ 2.78
Tpm1-216ENSMUST00000113707 Tnnt1O88346 262 aa32.4■■■□□ 2.78
Tpm1-216ENSMUST00000113707 SkilQ60665 675 aa32.4■■■□□ 2.78
Tpm1-216ENSMUST00000113707 Zfp142G5E869 1843 aa32.39■■■□□ 2.78
Tpm1-216ENSMUST00000113707 Slx1bQ8BX32 270 aa32.39■■■□□ 2.78
Tpm1-216ENSMUST00000113707 Pnpla7A2AJ88 1352 aa32.38■■■□□ 2.77
Tpm1-216ENSMUST00000113707 Chmp7Q8R1T1 451 aa32.37■■■□□ 2.77
Tpm1-216ENSMUST00000113707 Marf1Q8BJ34 1730 aaKnown RBP32.37■■■□□ 2.77
Tpm1-216ENSMUST00000113707 HnrnpuQ8VEK3 800 aaKnown RBP32.37■■■□□ 2.77
Tpm1-216ENSMUST00000113707 Zpr1Q62384 459 aa32.35■■■□□ 2.77
Tpm1-216ENSMUST00000113707 Fgd1P52734 960 aa32.34■■■□□ 2.77
Tpm1-216ENSMUST00000113707 Arhgef1Q61210 920 aaKnown RBP32.34■■■□□ 2.77
Tpm1-216ENSMUST00000113707 Cc2d1aQ8K1A6 943 aa32.33■■■□□ 2.77
Tpm1-216ENSMUST00000113707 Tm6sf1P58749 370 aa32.33■■■□□ 2.77
Tpm1-216ENSMUST00000113707 Acsbg1Q99PU5 721 aa32.33■■■□□ 2.77
Tpm1-216ENSMUST00000113707 Fam50bQ9WTJ8 334 aa32.33■■■□□ 2.77
Tpm1-216ENSMUST00000113707 BcorQ8CGN4 1759 aa32.32■■■□□ 2.76
Tpm1-216ENSMUST00000113707 Irx6Q9ER75 438 aa32.32■■■□□ 2.76
Tpm1-216ENSMUST00000113707 CoilQ5SU73 570 aa32.31■■■□□ 2.76
Tpm1-216ENSMUST00000113707 Gimap5Q8BWF2 308 aa32.31■■■□□ 2.76
Tpm1-216ENSMUST00000113707 Disp3A3KFU9 1347 aa32.31■■■□□ 2.76
Tpm1-216ENSMUST00000113707 Trim27Q62158 513 aa32.3■■■□□ 2.76
Tpm1-216ENSMUST00000113707 Ssfa2Q922B9 1252 aa32.3■■■□□ 2.76
Tpm1-216ENSMUST00000113707 Trim30dE9PWL0 497 aa32.29■■■□□ 2.76
Tpm1-216ENSMUST00000113707 Map7O88735 730 aa32.29■■■□□ 2.76
Tpm1-216ENSMUST00000113707 PsapQ61207 557 aaKnown RBP32.29■■■□□ 2.76
Tpm1-216ENSMUST00000113707 Ccdc155Q80VJ8 648 aa32.29■■■□□ 2.76
Tpm1-216ENSMUST00000113707 Prkar2bP31324 416 aa32.29■■■□□ 2.76
Retrieved 100 of 22,080 RNA–protein pairs in 94 ms