RNA–Protein interactions for RNA: ENSMUST00000109444.2

Col4a3bp-202, Transcript of Collagen type IV alpha-3-binding protein, mousemouse

TSL 1 (best) BASIC

Gene Col4a3bp, Length 5,285 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bp-202ENSMUST00000109444 BcanQ61361 883 aa20.99■□□□□ 0.95
Col4a3bp-202ENSMUST00000109444 Ift57Q8BXG3 429 aa20.99■□□□□ 0.95
Col4a3bp-202ENSMUST00000109444 Erlin2Q8BFZ9 340 aa20.99■□□□□ 0.95
Col4a3bp-202ENSMUST00000109444 Uspl1Q3ULM6 1089 aa20.98■□□□□ 0.95
Col4a3bp-202ENSMUST00000109444 Ggnbp2Q5SV77 696 aa20.98■□□□□ 0.95
Col4a3bp-202ENSMUST00000109444 4931400O07RikQ9D4M5 137 aa20.98■□□□□ 0.95
Col4a3bp-202ENSMUST00000109444 Wdr63B2RY71 923 aa20.98■□□□□ 0.95
Col4a3bp-202ENSMUST00000109444 Map9Q3TRR0 646 aa20.98■□□□□ 0.95
Col4a3bp-202ENSMUST00000109444 Ankrd44B2RXR6 993 aa20.98■□□□□ 0.95
Col4a3bp-202ENSMUST00000109444 Prkar2bP31324 416 aa20.98■□□□□ 0.95
Col4a3bp-202ENSMUST00000109444 Tbc1d9Q3UYK3 1264 aa20.98■□□□□ 0.95
Col4a3bp-202ENSMUST00000109444 Arhgef12Q8R4H2 1543 aaKnown RBP20.97■□□□□ 0.95
Col4a3bp-202ENSMUST00000109444 Ppip5k1A2ARP1 1436 aa20.97■□□□□ 0.95
Col4a3bp-202ENSMUST00000109444 Abcf1Q6P542 837 aaKnown RBP20.97■□□□□ 0.95
Col4a3bp-202ENSMUST00000109444 Atf3Q60765 181 aa20.97■□□□□ 0.95
Col4a3bp-202ENSMUST00000109444 Pik3r4Q8VD65 1358 aa20.97■□□□□ 0.95
Col4a3bp-202ENSMUST00000109444 BicraF8VPZ9 1578 aa20.97■□□□□ 0.95
Col4a3bp-202ENSMUST00000109444 Igbp1bQ9QZ29 343 aa20.97■□□□□ 0.95
Col4a3bp-202ENSMUST00000109444 Trim55G3X8Y1 545 aa20.96■□□□□ 0.95
Col4a3bp-202ENSMUST00000109444 Zranb3Q6NZP1 1069 aa20.96■□□□□ 0.95
Col4a3bp-202ENSMUST00000109444 Brf1Q8CFK2 676 aa20.96■□□□□ 0.95
Col4a3bp-202ENSMUST00000109444 Ccdc83Q9D4V3 305 aa20.96■□□□□ 0.95
Col4a3bp-202ENSMUST00000109444 Q3UPC7 1272 aa20.96■□□□□ 0.95
Col4a3bp-202ENSMUST00000109444 Plekhd1B2RPU2 505 aa20.96■□□□□ 0.95
Col4a3bp-202ENSMUST00000109444 Sycp1Q62209 993 aa20.96■□□□□ 0.95
Col4a3bp-202ENSMUST00000109444 Pms1Q8K119 917 aa20.96■□□□□ 0.95
Col4a3bp-202ENSMUST00000109444 Smg7Q5RJH6 1138 aaKnown RBP20.95■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 Fsd2Q8BZ52 692 aa20.95■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 Atxn3Q9CVD2 355 aa20.95■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 ItpripQ3TNL8 555 aa20.95■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 Lamb3Q61087 1168 aa20.95■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 Adck5Q80V03 582 aa20.95■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 Eif4g1Q6NZJ6 1600 aaKnown RBP20.95■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 Grin2aP35436 1464 aa20.95■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 Abcd1P48410 736 aa20.95■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 Ppp1r42Q8R1Z4 357 aa20.94■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 DmtnQ9WV69 405 aa20.94■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 Washc4Q3UMB9 1173 aa20.94■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 Flad1Q8R123 492 aa20.94■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 Sirt1Q923E4 737 aa20.94■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 ZwintQ9CQU5 252 aa20.94■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 Exoc6bA6H5Z3 810 aa20.94■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 LarsQ8BMJ2 1178 aa20.94■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 Zscan20B2KFW1 1030 aa20.93■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 Lrrfip1Q3UZ39 729 aaKnown RBP20.93■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 Ankrd1Q9CR42 319 aa20.93■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 Rapgef6Q5NCJ1 1609 aa20.93■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 Ube2hP62257 183 aa20.93■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 Zkscan7E9PVW1 718 aa20.92■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 Rasa1E9PYG6 1038 aa20.92■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 LlphQ9D945 130 aaKnown RBP20.92■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 Eva1cP58659 440 aa20.92■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 Pof1bQ8K4L4 587 aa20.92■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 Gm10093D3YYI8 482 aa20.92■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 Hdac1O09106 482 aaKnown RBP20.92■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 Gnl2Q99LH1 728 aaKnown RBP20.92■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 Znf771Q8BJ90 317 aa20.92■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 Eif5P59325 429 aaKnown RBP20.91■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 Btbd11Q6GQW0 1109 aa20.91■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 Riok1Q922Q2 567 aa20.91■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 3425401B19RikD3Z1D3 1412 aa20.91■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 Nucb2P81117 420 aa20.91■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 Ccdc39Q9D5Y1 937 aa20.91■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 Mybbp1aQ7TPV4 1344 aaKnown RBP20.91■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 Paxbp1P58501 919 aa20.91■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 Fam13aQ8BGI4 693 aa20.91■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 Cpa2Q504N0 417 aa20.91■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 4930572O03RikQ8C5Y0 211 aa20.91■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 TnikP83510 1323 aa20.9■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 Arglu1Q3UL36 271 aaKnown RBP20.9■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 AI481877A2ALV5 1481 aa20.9■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 LifrP42703 1092 aa20.9■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 Pafah1b1P63005 410 aaKnown RBP20.9■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 AidaQ8C4Q6 305 aa20.9■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 TbcaP48428 108 aaKnown RBP20.9■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 Cep131Q62036 1060 aa20.89■□□□□ 0.94
Col4a3bp-202ENSMUST00000109444 Trim34bJ3QNR8 485 aa20.89■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 Bms1Q6PGF5 1284 aaKnown RBP20.89■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 Larp1Q6ZQ58 1072 aaKnown RBP20.89■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 Stx6Q9JKK1 255 aa20.89■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 Mrps27Q8BK72 415 aaKnown RBP20.89■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 Ccdc178Q8CDV0 866 aa20.89■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 Smarca5Q91ZW3 1051 aaKnown RBP20.89■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 Gpatch8A2A6A1 1505 aa20.88■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 Limch1Q3UH68 1057 aa20.88■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 Ccdc191J3QQ27 883 aa20.88■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 Gm7361D3Z6R1 267 aa20.87■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 Abl1P00520 1123 aa20.87■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 Hoxb7P09024 217 aa20.87■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 Trim11Q99PQ2 467 aa20.87■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 Adcy5P84309 1262 aa20.87■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 Fez2Q6TYB5 348 aa20.87■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 Brms1Q99N20 246 aa20.87■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 Duxf3A0A0N4SV92 674 aa20.87■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 Stx1aO35526 288 aa20.87■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 Gm45140A0A0N4SUM8 220 aa20.86■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 Slc26a8Q8R0C3 999 aa20.86■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 Spty2d1Q68FG3 682 aa20.86■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 Lrrc45Q8CIM1 670 aa20.86■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 Kcnh5Q920E3 988 aa20.86■□□□□ 0.93
Retrieved 100 of 22,080 RNA–protein pairs in 100 ms