RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Parp14Q2EMV9 1817 aa23.07■■□□□ 1.28
Trim47-202ENSMUST00000106441 Rabep1O35551 862 aa23.07■■□□□ 1.28
Trim47-202ENSMUST00000106441 Tbc1d32Q3URV1 1296 aa23.07■■□□□ 1.28
Trim47-202ENSMUST00000106441 Txnrd1Q9JMH6 613 aa23.07■■□□□ 1.28
Trim47-202ENSMUST00000106441 Eif4a2P10630 407 aa23.07■■□□□ 1.28
Trim47-202ENSMUST00000106441 KarsQ99MN1 595 aaKnown RBP23.07■■□□□ 1.28
Trim47-202ENSMUST00000106441 Card10P58660 1021 aa23.06■■□□□ 1.28
Trim47-202ENSMUST00000106441 4933402E13RikQ9D4D2 429 aa23.06■■□□□ 1.28
Trim47-202ENSMUST00000106441 Kcnn1Q9EQR3 537 aa23.06■■□□□ 1.28
Trim47-202ENSMUST00000106441 Phlpp2Q8BXA7 1320 aa23.05■■□□□ 1.28
Trim47-202ENSMUST00000106441 Dusp27Q148W8 1138 aa23.05■■□□□ 1.28
Trim47-202ENSMUST00000106441 Fbxo41Q6NS60 873 aa23.05■■□□□ 1.28
Trim47-202ENSMUST00000106441 Arhgef1Q61210 920 aaKnown RBP23.04■■□□□ 1.28
Trim47-202ENSMUST00000106441 Ddx54Q8K4L0 874 aaKnown RBP23.04■■□□□ 1.28
Trim47-202ENSMUST00000106441 Ptpn23Q6PB44 1692 aa23.04■■□□□ 1.28
Trim47-202ENSMUST00000106441 AU015836B2RUM3 263 aa23.04■■□□□ 1.28
Trim47-202ENSMUST00000106441 Ccne1Q61457 408 aa23.04■■□□□ 1.28
Trim47-202ENSMUST00000106441 Pknox2Q8BG99 474 aa23.04■■□□□ 1.28
Trim47-202ENSMUST00000106441 Nol11Q8BJW5 723 aaKnown RBP23.04■■□□□ 1.28
Trim47-202ENSMUST00000106441 Uhrf1bp1B2KF50 1429 aa23.03■■□□□ 1.28
Trim47-202ENSMUST00000106441 Ggt6Q6PDE7 497 aa23.03■■□□□ 1.28
Trim47-202ENSMUST00000106441 Amotl2Q8K371 772 aa23.03■■□□□ 1.28
Trim47-202ENSMUST00000106441 Lrrc59Q922Q8 307 aaKnown RBP23.03■■□□□ 1.28
Trim47-202ENSMUST00000106441 PalmQ9Z0P4 383 aa23.03■■□□□ 1.28
Trim47-202ENSMUST00000106441 Armcx1Q9CX83 456 aa23.02■■□□□ 1.28
Trim47-202ENSMUST00000106441 Gtf2a1Q99PM3 378 aa23■■□□□ 1.27
Trim47-202ENSMUST00000106441 Trim26Q99PN3 545 aa23■■□□□ 1.27
Trim47-202ENSMUST00000106441 Ttc21aQ8C0S4 1314 aa23■■□□□ 1.27
Trim47-202ENSMUST00000106441 Cavin4A2AMM0 362 aa23■■□□□ 1.27
Trim47-202ENSMUST00000106441 Map7O88735 730 aa23■■□□□ 1.27
Trim47-202ENSMUST00000106441 Gm6268A2A3U9 297 aa22.99■■□□□ 1.27
Trim47-202ENSMUST00000106441 CastP51125 788 aa22.99■■□□□ 1.27
Trim47-202ENSMUST00000106441 Ccdc171E9Q1U1 1324 aa22.99■■□□□ 1.27
Trim47-202ENSMUST00000106441 Spef2Q8C9J3 1734 aa22.99■■□□□ 1.27
Trim47-202ENSMUST00000106441 Slit2Q9R1B9 1521 aa22.98■■□□□ 1.27
Trim47-202ENSMUST00000106441 Zfp777B9EKF4 885 aa22.98■■□□□ 1.27
Trim47-202ENSMUST00000106441 MpripP97434 1024 aa22.98■■□□□ 1.27
Trim47-202ENSMUST00000106441 Tnpo1Q8BFY9 898 aaKnown RBP22.97■■□□□ 1.27
Trim47-202ENSMUST00000106441 Nyap1Q6PFX7 833 aa22.97■■□□□ 1.27
Trim47-202ENSMUST00000106441 Ankrd50F7BE84 1390 aa22.96■■□□□ 1.27
Trim47-202ENSMUST00000106441 Kdm6aO70546 1401 aa22.96■■□□□ 1.27
Trim47-202ENSMUST00000106441 Eya1P97767 591 aa22.95■■□□□ 1.26
Trim47-202ENSMUST00000106441 Nhsl1Q8CAF4 1587 aa22.94■■□□□ 1.26
Trim47-202ENSMUST00000106441 OptnQ8K3K8 584 aa22.94■■□□□ 1.26
Trim47-202ENSMUST00000106441 CrklP47941 303 aa22.93■■□□□ 1.26
Trim47-202ENSMUST00000106441 Fchsd2Q3USJ8 740 aa22.93■■□□□ 1.26
Trim47-202ENSMUST00000106441 Slx1bQ8BX32 270 aa22.93■■□□□ 1.26
Trim47-202ENSMUST00000106441 Phf14Q9D4H9 881 aa22.92■■□□□ 1.26
Trim47-202ENSMUST00000106441 Pard3Q99NH2 1333 aa22.91■■□□□ 1.26
Trim47-202ENSMUST00000106441 Cluap1Q8R3P7 413 aa22.91■■□□□ 1.26
Trim47-202ENSMUST00000106441 Cntnap1O54991 1385 aa22.91■■□□□ 1.26
Trim47-202ENSMUST00000106441 Sema6bO54951 886 aa22.9■■□□□ 1.26
Trim47-202ENSMUST00000106441 Kif20aP97329 887 aa22.9■■□□□ 1.26
Trim47-202ENSMUST00000106441 TkfcQ8VC30 578 aa22.9■■□□□ 1.26
Trim47-202ENSMUST00000106441 Ppp1r3fQ9JIG4 799 aa22.9■■□□□ 1.26
Trim47-202ENSMUST00000106441 FocadA2AKG8 1798 aa22.9■■□□□ 1.26
Trim47-202ENSMUST00000106441 Rbm25B2RY56 838 aaKnown RBP22.9■■□□□ 1.26
Trim47-202ENSMUST00000106441 Slit1Q80TR4 1531 aa22.89■■□□□ 1.26
Trim47-202ENSMUST00000106441 RgmbQ7TQ33 436 aa22.89■■□□□ 1.26
Trim47-202ENSMUST00000106441 Plin1Q8CGN5 517 aa22.89■■□□□ 1.26
Trim47-202ENSMUST00000106441 Mcm10Q0VBD2 885 aa22.89■■□□□ 1.25
Trim47-202ENSMUST00000106441 Ccdc60Q8C4J0 545 aa22.89■■□□□ 1.25
Trim47-202ENSMUST00000106441 G3bp1P97855 465 aaKnown RBP22.87■■□□□ 1.25
Trim47-202ENSMUST00000106441 Maco1Q7TQE6 664 aaKnown RBP22.87■■□□□ 1.25
Trim47-202ENSMUST00000106441 Swt1Q9DBQ9 907 aa22.87■■□□□ 1.25
Trim47-202ENSMUST00000106441 Col15a1O35206 1367 aa22.87■■□□□ 1.25
Trim47-202ENSMUST00000106441 AU019823E9PUQ3 292 aa22.87■■□□□ 1.25
Trim47-202ENSMUST00000106441 Pnmal2G3X9N3 661 aa22.87■■□□□ 1.25
Trim47-202ENSMUST00000106441 ArxO35085 564 aa22.87■■□□□ 1.25
Trim47-202ENSMUST00000106441 SkilQ60665 675 aa22.87■■□□□ 1.25
Trim47-202ENSMUST00000106441 Mfap1aC0HKD8 439 aaKnown RBP22.86■■□□□ 1.25
Trim47-202ENSMUST00000106441 Mfap1bC0HKD9 439 aaKnown RBP22.86■■□□□ 1.25
Trim47-202ENSMUST00000106441 Emilin2Q8K482 1074 aa22.86■■□□□ 1.25
Trim47-202ENSMUST00000106441 Rrp9Q91WM3 475 aaKnown RBP22.86■■□□□ 1.25
Trim47-202ENSMUST00000106441 Antxr1Q9CZ52 562 aa22.86■■□□□ 1.25
Trim47-202ENSMUST00000106441 Stk31Q99MW1 1018 aa22.86■■□□□ 1.25
Trim47-202ENSMUST00000106441 Lrp6O88572 1613 aa22.85■■□□□ 1.25
Trim47-202ENSMUST00000106441 Gm10471E9Q1C7 252 aa22.85■■□□□ 1.25
Trim47-202ENSMUST00000106441 KnstrnQ9D9Z1 312 aaKnown RBP22.85■■□□□ 1.25
Trim47-202ENSMUST00000106441 Plekhd1B2RPU2 505 aa22.84■■□□□ 1.25
Trim47-202ENSMUST00000106441 Kif18aQ91WD7 886 aa22.84■■□□□ 1.25
Trim47-202ENSMUST00000106441 Chmp4bQ9D8B3 224 aaKnown RBP22.84■■□□□ 1.25
Trim47-202ENSMUST00000106441 Simc1E9Q6E9 1354 aa22.84■■□□□ 1.25
Trim47-202ENSMUST00000106441 MypopQ8R4U1 393 aa22.83■■□□□ 1.25
Trim47-202ENSMUST00000106441 Zeb2Q9R0G7 1215 aa22.83■■□□□ 1.25
Trim47-202ENSMUST00000106441 Q4VA45 678 aa22.83■■□□□ 1.24
Trim47-202ENSMUST00000106441 Wwc1Q5SXA9 1104 aa22.83■■□□□ 1.24
Trim47-202ENSMUST00000106441 Zranb3Q6NZP1 1069 aa22.83■■□□□ 1.24
Trim47-202ENSMUST00000106441 Gsdma3Q5Y4Y6 464 aa22.81■■□□□ 1.24
Trim47-202ENSMUST00000106441 Ppp1r37Q8BKR5 712 aa22.8■■□□□ 1.24
Trim47-202ENSMUST00000106441 Brd1E9PZ26 1189 aaKnown RBP22.8■■□□□ 1.24
Trim47-202ENSMUST00000106441 Zpr1Q62384 459 aa22.8■■□□□ 1.24
Trim47-202ENSMUST00000106441 Kif2cQ922S8 721 aa22.8■■□□□ 1.24
Trim47-202ENSMUST00000106441 Cabp2Q9JLK4 216 aa22.8■■□□□ 1.24
Trim47-202ENSMUST00000106441 Terf2O35144 541 aa22.79■■□□□ 1.24
Trim47-202ENSMUST00000106441 Rab11fip3Q8CHD8 1047 aa22.79■■□□□ 1.24
Trim47-202ENSMUST00000106441 HypkQ9CR41 129 aa22.79■■□□□ 1.24
Trim47-202ENSMUST00000106441 Dnttip2Q8R2M2 758 aaKnown RBP22.79■■□□□ 1.24
Trim47-202ENSMUST00000106441 Shank2Q80Z38 1476 aa22.78■■□□□ 1.24
Trim47-202ENSMUST00000106441 Arfgef2A2A5R2 1792 aa22.78■■□□□ 1.24
Retrieved 100 of 22,080 RNA–protein pairs in 59.1 ms