RNA–Protein interactions for RNA: ENSMUST00000088716.11

Smarcc1-201, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-201ENSMUST00000088716 Sugp2Q8CH09 1067 aa25.42■■□□□ 1.66
Smarcc1-201ENSMUST00000088716 Tfip11Q9ERA6 838 aaKnown RBP25.42■■□□□ 1.66
Smarcc1-201ENSMUST00000088716 PtprkP35822 1457 aa25.42■■□□□ 1.66
Smarcc1-201ENSMUST00000088716 Mug1P28665 1476 aa25.41■■□□□ 1.66
Smarcc1-201ENSMUST00000088716 Igf1rQ60751 1373 aa25.39■■□□□ 1.66
Smarcc1-201ENSMUST00000088716 Golim4Q8BXA1 655 aa25.39■■□□□ 1.66
Smarcc1-201ENSMUST00000088716 CenpqQ9CPQ5 267 aa25.39■■□□□ 1.66
Smarcc1-201ENSMUST00000088716 Magi1Q6RHR9 1471 aa25.39■■□□□ 1.66
Smarcc1-201ENSMUST00000088716 Bicdl1A0JNT9 577 aa25.38■■□□□ 1.65
Smarcc1-201ENSMUST00000088716 Slc26a8Q8R0C3 999 aa25.38■■□□□ 1.65
Smarcc1-201ENSMUST00000088716 Galntl5Q9D4M9 431 aa25.38■■□□□ 1.65
Smarcc1-201ENSMUST00000088716 Cfap45Q9D9U9 551 aa25.38■■□□□ 1.65
Smarcc1-201ENSMUST00000088716 Mum1Q6DID5 682 aa25.38■■□□□ 1.65
Smarcc1-201ENSMUST00000088716 Ccdc39Q9D5Y1 937 aa25.38■■□□□ 1.65
Smarcc1-201ENSMUST00000088716 Lamb3Q61087 1168 aa25.38■■□□□ 1.65
Smarcc1-201ENSMUST00000088716 Adck5Q80V03 582 aa25.38■■□□□ 1.65
Smarcc1-201ENSMUST00000088716 Iqca1Q9CUL5 857 aa25.38■■□□□ 1.65
Smarcc1-201ENSMUST00000088716 Naip2Q9QUK4 1447 aa25.38■■□□□ 1.65
Smarcc1-201ENSMUST00000088716 Samm50Q8BGH2 469 aa25.38■■□□□ 1.65
Smarcc1-201ENSMUST00000088716 CenphQ9QYM8 241 aa25.38■■□□□ 1.65
Smarcc1-201ENSMUST00000088716 EappQ5BU09 281 aa25.37■■□□□ 1.65
Smarcc1-201ENSMUST00000088716 ScaperF8VQ70 1398 aaKnown RBP25.37■■□□□ 1.65
Smarcc1-201ENSMUST00000088716 MycnP03966 462 aaKnown RBP25.36■■□□□ 1.65
Smarcc1-201ENSMUST00000088716 Frmpd1A2AKB4 1549 aa25.36■■□□□ 1.65
Smarcc1-201ENSMUST00000088716 Fbln2P37889 1221 aa25.36■■□□□ 1.65
Smarcc1-201ENSMUST00000088716 Tspyl2Q7TQI8 677 aa25.35■■□□□ 1.65
Smarcc1-201ENSMUST00000088716 Themis2Q91YX0 663 aa25.35■■□□□ 1.65
Smarcc1-201ENSMUST00000088716 Kdm4aQ8BW72 1064 aa25.35■■□□□ 1.65
Smarcc1-201ENSMUST00000088716 Elp1Q7TT37 1333 aaKnown RBP25.35■■□□□ 1.65
Smarcc1-201ENSMUST00000088716 Ccdc102aQ3TMW1 549 aa25.34■■□□□ 1.65
Smarcc1-201ENSMUST00000088716 Wwc1Q5SXA9 1104 aa25.34■■□□□ 1.65
Smarcc1-201ENSMUST00000088716 Phf14Q9D4H9 881 aa25.34■■□□□ 1.65
Smarcc1-201ENSMUST00000088716 ItpripQ3TNL8 555 aa25.34■■□□□ 1.65
Smarcc1-201ENSMUST00000088716 Smarca5Q91ZW3 1051 aaKnown RBP25.34■■□□□ 1.65
Smarcc1-201ENSMUST00000088716 Strn4P58404 760 aa25.34■■□□□ 1.65
Smarcc1-201ENSMUST00000088716 Rbm10Q99KG3 930 aaKnown RBP25.33■■□□□ 1.65
Smarcc1-201ENSMUST00000088716 Lrrfip1Q3UZ39 729 aaKnown RBP25.33■■□□□ 1.65
Smarcc1-201ENSMUST00000088716 Nup133Q8R0G9 1155 aa25.33■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 CastP51125 788 aa25.32■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 Wdhd1P59328 1117 aa25.32■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 Fam184aE9PW83 1143 aa25.32■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 NinlQ6ZQ12 1394 aa25.32■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 Ppm1eQ80TL0 749 aa25.31■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 Ppp1r42Q8R1Z4 357 aa25.31■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 Crocc2F6XLV1 1638 aa25.31■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 GpkowQ56A08 488 aa25.31■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 Slu7Q8BHJ9 585 aa25.31■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 Ccdc178Q8CDV0 866 aa25.31■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 Tnni2P13412 182 aa25.31■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 Vps37dQ810I0 261 aa25.31■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 Neo1P97798 1493 aa25.31■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 AqrQ8CFQ3 1481 aaKnown RBP25.31■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 TxlnbQ8VBT1 685 aa25.31■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 Gigyf1Q99MR1 1044 aaKnown RBP25.31■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 Gm10563F6WIE4 79 aa25.3■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 Cpa2Q504N0 417 aa25.3■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 Ripk4Q9ERK0 786 aa25.3■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 Pof1bQ8K4L4 587 aa25.3■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 Gnl2Q99LH1 728 aaKnown RBP25.3■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 Nol7Q9D7Z3 254 aaKnown RBP25.3■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 Abcc5Q9R1X5 1436 aa25.3■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 Gjb2Q00977 226 aa25.3■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 Ssr1Q9CY50 286 aaKnown RBP25.29■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 Ccdc172Q810N9 267 aa25.29■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 Sall3Q62255 1320 aa25.29■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 Caskin1Q6P9K8 1431 aa25.29■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 Plekhm2Q80TQ5 1018 aa25.29■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 Pcf11G3X9Z4 1553 aa25.29■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 Gm1043A0A140LJC2 1431 aa25.28■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 Prkar2bP31324 416 aa25.28■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 Slc5a1Q8C3K6 665 aa25.28■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 Secisbp2lQ6A098 1086 aaKnown RBP25.28■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 Atxn3Q9CVD2 355 aa25.28■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 AcrbpQ3V140 540 aa25.27■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 Syce3B5KM66 88 aa25.27■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 Cep55Q8BT07 462 aa25.27■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 Def6Q8C2K1 630 aa25.27■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 Rrp9Q91WM3 475 aaKnown RBP25.27■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 Bag3Q9JLV1 577 aaKnown RBP25.27■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 Znf287Q9EQB9 759 aa25.27■■□□□ 1.64
Smarcc1-201ENSMUST00000088716 SfswapQ3USH5 945 aaKnown RBP25.26■■□□□ 1.63
Smarcc1-201ENSMUST00000088716 ZwintQ9CQU5 252 aa25.26■■□□□ 1.63
Smarcc1-201ENSMUST00000088716 Lrrfip2Q91WK0 415 aa25.26■■□□□ 1.63
Smarcc1-201ENSMUST00000088716 Nap1l5Q9JJF0 156 aa25.26■■□□□ 1.63
Smarcc1-201ENSMUST00000088716 Ccar2Q8VDP4 922 aaKnown RBP25.26■■□□□ 1.63
Smarcc1-201ENSMUST00000088716 Camsap1A2AHC3 1581 aa25.26■■□□□ 1.63
Smarcc1-201ENSMUST00000088716 Polr3aB2RXC6 1390 aa25.26■■□□□ 1.63
Smarcc1-201ENSMUST00000088716 Wdr33Q8K4P0 1330 aaKnown RBP25.26■■□□□ 1.63
Smarcc1-201ENSMUST00000088716 Hs1bp3Q3TC93 395 aa25.26■■□□□ 1.63
Smarcc1-201ENSMUST00000088716 Cyb5rlB1AS42 316 aa25.25■■□□□ 1.63
Smarcc1-201ENSMUST00000088716 Ccne1Q61457 408 aa25.25■■□□□ 1.63
Smarcc1-201ENSMUST00000088716 Dnaaf4Q8R368 420 aa25.25■■□□□ 1.63
Smarcc1-201ENSMUST00000088716 Mipol1Q9D9F8 279 aa25.24■■□□□ 1.63
Smarcc1-201ENSMUST00000088716 SynmQ70IV5 1561 aa25.24■■□□□ 1.63
Smarcc1-201ENSMUST00000088716 Pafah1b1P63005 410 aaKnown RBP25.24■■□□□ 1.63
Smarcc1-201ENSMUST00000088716 Frmd3Q8BHD4 595 aa25.24■■□□□ 1.63
Smarcc1-201ENSMUST00000088716 Kcnn1Q9EQR3 537 aa25.24■■□□□ 1.63
Smarcc1-201ENSMUST00000088716 NapbP28663 298 aa25.24■■□□□ 1.63
Smarcc1-201ENSMUST00000088716 L3mbtl2P59178 703 aa25.24■■□□□ 1.63
Smarcc1-201ENSMUST00000088716 Ddx58Q6Q899 926 aa25.24■■□□□ 1.63
Retrieved 100 of 22,080 RNA–protein pairs in 63.4 ms