RNA–Protein interactions for RNA: ENSMUST00000078409.4

Trim61-201, Transcript of MCG22896, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim61, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61-201ENSMUST00000078409 Stag3O70576 1240 aa13.68□□□□□ -0.22
Trim61-201ENSMUST00000078409 Slx1bQ8BX32 270 aa13.68□□□□□ -0.22
Trim61-201ENSMUST00000078409 Ccdc38Q8CDN8 563 aa13.68□□□□□ -0.22
Trim61-201ENSMUST00000078409 Card11Q8CIS0 1159 aa13.68□□□□□ -0.22
Trim61-201ENSMUST00000078409 PsdQ5DTT2 1024 aa13.67□□□□□ -0.22
Trim61-201ENSMUST00000078409 Pak3Q61036 559 aa13.67□□□□□ -0.22
Trim61-201ENSMUST00000078409 Wdr43Q6ZQL4 677 aaKnown RBP13.67□□□□□ -0.22
Trim61-201ENSMUST00000078409 AdnpQ9Z103 1108 aaKnown RBP13.67□□□□□ -0.22
Trim61-201ENSMUST00000078409 Erich4Q3UNU4 136 aa13.67□□□□□ -0.22
Trim61-201ENSMUST00000078409 RalgapbQ8BQZ4 1484 aa13.67□□□□□ -0.22
Trim61-201ENSMUST00000078409 Rrp12Q6P5B0 1295 aaKnown RBP13.66□□□□□ -0.22
Trim61-201ENSMUST00000078409 Nol7Q9D7Z3 254 aaKnown RBP13.66□□□□□ -0.22
Trim61-201ENSMUST00000078409 Cald1E9QA15 768 aaKnown RBP13.65□□□□□ -0.22
Trim61-201ENSMUST00000078409 Lrp5Q91VN0 1614 aa13.65□□□□□ -0.22
Trim61-201ENSMUST00000078409 Uhrf1bp1lA2RSJ4 1457 aa13.65□□□□□ -0.22
Trim61-201ENSMUST00000078409 FanciQ8K368 1330 aa13.65□□□□□ -0.22
Trim61-201ENSMUST00000078409 Gm21698A0A087WQP8 267 aa13.64□□□□□ -0.23
Trim61-201ENSMUST00000078409 Gm21671G3UY31 267 aa13.64□□□□□ -0.23
Trim61-201ENSMUST00000078409 Stra8P70278 393 aa13.64□□□□□ -0.23
Trim61-201ENSMUST00000078409 Rgl3Q3UYI5 709 aa13.64□□□□□ -0.23
Trim61-201ENSMUST00000078409 Cdk19Q8BWD8 501 aa13.64□□□□□ -0.23
Trim61-201ENSMUST00000078409 Akap11E9Q777 1895 aa13.63□□□□□ -0.23
Trim61-201ENSMUST00000078409 Liat1Q810M6 228 aa13.63□□□□□ -0.23
Trim61-201ENSMUST00000078409 Ccdc96Q9CR92 584 aa13.63□□□□□ -0.23
Trim61-201ENSMUST00000078409 Ppef1O35655 650 aa13.63□□□□□ -0.23
Trim61-201ENSMUST00000078409 MycnP03966 462 aaKnown RBP13.63□□□□□ -0.23
Trim61-201ENSMUST00000078409 Irf6P97431 467 aa13.63□□□□□ -0.23
Trim61-201ENSMUST00000078409 Noc3lQ8VI84 807 aaKnown RBP13.63□□□□□ -0.23
Trim61-201ENSMUST00000078409 Gtpbp6Q3U6U5 514 aa13.62□□□□□ -0.23
Trim61-201ENSMUST00000078409 Clcn1Q64347 994 aa13.62□□□□□ -0.23
Trim61-201ENSMUST00000078409 Fbxo2Q80UW2 297 aa13.62□□□□□ -0.23
Trim61-201ENSMUST00000078409 Usp40Q8BWR4 1235 aa13.62□□□□□ -0.23
Trim61-201ENSMUST00000078409 Gimap6Q8K349 305 aa13.62□□□□□ -0.23
Trim61-201ENSMUST00000078409 Znf710Q3U288 666 aa13.62□□□□□ -0.23
Trim61-201ENSMUST00000078409 Vars2Q3U2A8 1060 aa13.62□□□□□ -0.23
Trim61-201ENSMUST00000078409 Ipo8Q7TMY7 1010 aa13.62□□□□□ -0.23
Trim61-201ENSMUST00000078409 Psen1P49769 467 aa13.61□□□□□ -0.23
Trim61-201ENSMUST00000078409 GalcP54818 684 aa13.61□□□□□ -0.23
Trim61-201ENSMUST00000078409 Frmpd2A0A140LI67 1392 aa13.61□□□□□ -0.23
Trim61-201ENSMUST00000078409 TonslQ6NZL6 1363 aa13.61□□□□□ -0.23
Trim61-201ENSMUST00000078409 Zcrb1Q9CZ96 217 aaKnown RBP13.6□□□□□ -0.23
Trim61-201ENSMUST00000078409 GakQ99KY4 1305 aa13.6□□□□□ -0.23
Trim61-201ENSMUST00000078409 Nphp4P59240 1425 aa13.6□□□□□ -0.23
Trim61-201ENSMUST00000078409 Vps33bP59016 617 aa13.6□□□□□ -0.23
Trim61-201ENSMUST00000078409 1700122O11RikJ3QPW6 241 aa13.59□□□□□ -0.23
Trim61-201ENSMUST00000078409 Polr3glQ8R0C0 218 aa13.59□□□□□ -0.23
Trim61-201ENSMUST00000078409 Usp47Q8BY87 1376 aa13.59□□□□□ -0.23
Trim61-201ENSMUST00000078409 Lrit1Q8K099 624 aa13.58□□□□□ -0.24
Trim61-201ENSMUST00000078409 Pdlim2Q8R1G6 349 aa13.58□□□□□ -0.24
Trim61-201ENSMUST00000078409 Snapc4Q8BP86 1333 aa13.57□□□□□ -0.24
Trim61-201ENSMUST00000078409 Card10P58660 1021 aa13.57□□□□□ -0.24
Trim61-201ENSMUST00000078409 Ncoa4Q5U4H9 625 aa13.57□□□□□ -0.24
Trim61-201ENSMUST00000078409 Rapgefl1Q68EF8 662 aa13.57□□□□□ -0.24
Trim61-201ENSMUST00000078409 Idi2Q8BFZ6 227 aa13.57□□□□□ -0.24
Trim61-201ENSMUST00000078409 Map7d2A2AG50 781 aa13.56□□□□□ -0.24
Trim61-201ENSMUST00000078409 Gabpb2P81069 414 aa13.56□□□□□ -0.24
Trim61-201ENSMUST00000078409 Ppp4r2Q0VGB7 417 aa13.56□□□□□ -0.24
Trim61-201ENSMUST00000078409 Kcnq2Q9Z351 759 aa13.56□□□□□ -0.24
Trim61-201ENSMUST00000078409 Yy1Q00899 414 aa13.55□□□□□ -0.24
Trim61-201ENSMUST00000078409 Wwc1Q5SXA9 1104 aa13.55□□□□□ -0.24
Trim61-201ENSMUST00000078409 PogkQ80TC5 607 aa13.55□□□□□ -0.24
Trim61-201ENSMUST00000078409 B4galnt3Q6L8S8 986 aa13.54□□□□□ -0.24
Trim61-201ENSMUST00000078409 Ankrd23Q812A3 306 aa13.54□□□□□ -0.24
Trim61-201ENSMUST00000078409 CenpjQ569L8 1344 aa13.54□□□□□ -0.24
Trim61-201ENSMUST00000078409 Ccdc85cE9Q6B2 420 aa13.54□□□□□ -0.24
Trim61-201ENSMUST00000078409 Ppfibp2O35711 882 aa13.54□□□□□ -0.24
Trim61-201ENSMUST00000078409 Ubxn2bQ0KL01 331 aa13.54□□□□□ -0.24
Trim61-201ENSMUST00000078409 Ccar1Q8CH18 1146 aaKnown RBP13.54□□□□□ -0.24
Trim61-201ENSMUST00000078409 Gsto1O09131 240 aa13.53□□□□□ -0.24
Trim61-201ENSMUST00000078409 Kiaa0753Q6A000 959 aa13.53□□□□□ -0.24
Trim61-201ENSMUST00000078409 Znf335A2A5K6 1337 aa13.53□□□□□ -0.24
Trim61-201ENSMUST00000078409 Erbb3Q61526 1339 aa13.53□□□□□ -0.24
Trim61-201ENSMUST00000078409 Mst1rQ62190 1378 aa13.53□□□□□ -0.24
Trim61-201ENSMUST00000078409 Dnajc2P54103 621 aaKnown RBP13.52□□□□□ -0.24
Trim61-201ENSMUST00000078409 Amotl2Q8K371 772 aa13.52□□□□□ -0.24
Trim61-201ENSMUST00000078409 Zc3h4Q6ZPZ3 1304 aaKnown RBP13.52□□□□□ -0.24
Trim61-201ENSMUST00000078409 Ptpn23Q6PB44 1692 aa13.52□□□□□ -0.24
Trim61-201ENSMUST00000078409 Nsd3Q6P2L6 1439 aa13.52□□□□□ -0.24
Trim61-201ENSMUST00000078409 TnrQ8BYI9 1358 aa13.52□□□□□ -0.25
Trim61-201ENSMUST00000078409 Ddb1Q3U1J4 1140 aaKnown RBP13.51□□□□□ -0.25
Trim61-201ENSMUST00000078409 EspnQ9ET47 871 aa13.51□□□□□ -0.25
Trim61-201ENSMUST00000078409 Map3k19E9Q3S4 1311 aa13.51□□□□□ -0.25
Trim61-201ENSMUST00000078409 Zfp251Q6PCX8 632 aa13.51□□□□□ -0.25
Trim61-201ENSMUST00000078409 Themis2Q91YX0 663 aa13.51□□□□□ -0.25
Trim61-201ENSMUST00000078409 Pim2Q62070 370 aa13.5□□□□□ -0.25
Trim61-201ENSMUST00000078409 Riok3Q9DBU3 519 aaKnown RBP13.5□□□□□ -0.25
Trim61-201ENSMUST00000078409 Arfgef2A2A5R2 1792 aa13.49□□□□□ -0.25
Trim61-201ENSMUST00000078409 Ddx46Q569Z5 1032 aaKnown RBP13.49□□□□□ -0.25
Trim61-201ENSMUST00000078409 Ginm1Q91WR6 327 aa13.49□□□□□ -0.25
Trim61-201ENSMUST00000078409 Kcnh5Q920E3 988 aa13.49□□□□□ -0.25
Trim61-201ENSMUST00000078409 Nckap5lQ6GQX2 1323 aa13.48□□□□□ -0.25
Trim61-201ENSMUST00000078409 AtrnQ9WU60 1428 aa13.48□□□□□ -0.25
Trim61-201ENSMUST00000078409 Arhgap33Q80YF9 1305 aa13.47□□□□□ -0.25
Trim61-201ENSMUST00000078409 RgmbQ7TQ33 436 aa13.47□□□□□ -0.25
Trim61-201ENSMUST00000078409 Plin1Q8CGN5 517 aa13.47□□□□□ -0.25
Trim61-201ENSMUST00000078409 Mrvi1Q9WUX5 899 aaKnown RBP13.47□□□□□ -0.25
Trim61-201ENSMUST00000078409 FancaQ9JL70 1439 aa13.47□□□□□ -0.25
Trim61-201ENSMUST00000078409 Rnf180Q3U827 592 aa13.47□□□□□ -0.25
Trim61-201ENSMUST00000078409 Trpc5Q9QX29 975 aa13.47□□□□□ -0.25
Trim61-201ENSMUST00000078409 Fam184bQ0KK56 942 aa13.46□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 94.4 ms