RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Srgap3Q812A2 1099 aa10.35□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 CltcQ68FD5 1675 aaKnown RBP10.35□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Cep170bQ80U49 1574 aa10.35□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Vsig10D3YX43 558 aa10.35□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Dnttip2Q8R2M2 758 aaKnown RBP10.35□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Arhgef28P97433 1693 aa10.35□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 AU015836B2RUM3 263 aa10.35□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Hmox1P14901 289 aa10.35□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 AU019823E9PUQ3 292 aa10.34□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Spryd3E9Q9B3 442 aa10.34□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 VgfQ0VGU4 617 aa10.34□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 AnlnQ8K298 1121 aaKnown RBP10.34□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Nlgn1Q99K10 843 aa10.34□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Isy1Q69ZQ2 285 aaKnown RBP10.34□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Mphosph10Q810V0 681 aaKnown RBP10.34□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Plekhd1B2RPU2 505 aa10.34□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 MecomP14404 1042 aa10.34□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Eya1P97767 591 aa10.34□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Btbd11Q6GQW0 1109 aa10.34□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Casc1Q6TDU8 730 aa10.34□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Ercc6l2Q9JIM3 1537 aa10.34□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Brpf1B2RRD7 1212 aa10.33□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 TefQ9JLC6 301 aa10.33□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Hoxc9P09633 260 aa10.33□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Ppip5k2Q6ZQB6 1129 aa10.33□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Evi5lH3BKQ3 813 aa10.33□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Klhdc4Q921I2 584 aa10.33□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 CemipQ8BI06 1361 aa10.33□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Gm21698A0A087WQP8 267 aa10.33□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Gm21671G3UY31 267 aa10.33□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Smc4Q8CG47 1286 aa10.33□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Qser1A2BIE1 1698 aa10.33□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Nol11Q8BJW5 723 aaKnown RBP10.33□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Nol10Q5RJG1 687 aaKnown RBP10.32□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Mum1Q6DID5 682 aa10.32□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 4930572O03RikQ8C5Y0 211 aa10.32□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 CenppQ9CZ92 286 aa10.32□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Gm10093D3YYI8 482 aa10.32□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Hdac1O09106 482 aaKnown RBP10.32□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Cwc27Q3TKY6 469 aa10.32□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Tbc1d9Q3UYK3 1264 aa10.32□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Fam13aQ8BGI4 693 aa10.32□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Idi1P58044 227 aa10.32□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Ddx11Q6AXC6 880 aa10.32□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Zkscan1Q8BGS3 561 aaKnown RBP10.32□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Noc3lQ8VI84 807 aaKnown RBP10.32□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Cdk12Q14AX6 1484 aaKnown RBP10.31□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Fkbp4P30416 458 aa10.31□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Cct4P80315 539 aaKnown RBP10.31□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Ppp1r42Q8R1Z4 357 aa10.31□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Ptpdc1Q6NZK8 747 aa10.31□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Zranb3Q6NZP1 1069 aa10.31□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Tm6sf1P58749 370 aa10.31□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Chpf2Q3UU43 768 aa10.31□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Cchcr1Q8K2I2 770 aa10.31□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 ZgpatQ8VDM1 511 aa10.31□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Echdc1Q9D9V3 322 aa10.31□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Terf2O35144 541 aa10.3□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Farp2Q91VS8 1065 aa10.3□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Igsf1Q7TQA1 1317 aa10.3□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Zpr1Q62384 459 aa10.3□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Ints3Q7TPD0 1041 aaKnown RBP10.3□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Chl1P70232 1209 aa10.3□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Kdm6aO70546 1401 aa10.29□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Pes1Q9EQ61 584 aaKnown RBP10.29□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 PhaxQ9JJT9 385 aaKnown RBP10.29□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Ano8Q6PB70 1060 aa10.29□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 MarsQ68FL6 902 aaKnown RBP10.29□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Tfip11Q9ERA6 838 aaKnown RBP10.29□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Usp32F8VPZ3 1604 aa10.29□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Rnf20Q5DTM8 973 aa10.29□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Ncoa4Q5U4H9 625 aa10.28□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Rims2Q9EQZ7 1530 aa10.28□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Sh3bp5Q9Z131 463 aa10.28□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Atp8b2P98199 1209 aa10.28□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Eif3bQ8JZQ9 803 aaKnown RBP10.28□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Myom1Q62234 1667 aaKnown RBP10.28□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 PnnO35691 725 aaKnown RBP10.27□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Tmem132eQ6IEE6 982 aa10.27□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Rhot2Q8JZN7 620 aa10.27□□□□□ -0.76
Sf3b1-201ENSMUST00000027127 Cnnm1Q0GA42 951 aa10.27□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Fam83gQ5SWY7 812 aa10.27□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Smarca5Q91ZW3 1051 aaKnown RBP10.27□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Ppp1r3fQ9JIG4 799 aa10.27□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Stk36Q69ZM6 1316 aa10.27□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 FancaQ9JL70 1439 aa10.27□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Exoc6bA6H5Z3 810 aa10.27□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 R3hcc1Q8BSI6 488 aa10.27□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Bcl2l13P59017 434 aa10.27□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Cps1Q8C196 1500 aa10.26□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Prim1P20664 417 aa10.26□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Gnl3lQ6PGG6 577 aaKnown RBP10.26□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 FanclQ9CR14 375 aa10.26□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Phactr2B1AVP0 632 aa10.26□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 NexnQ7TPW1 607 aa10.26□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Dip2bQ3UH60 1574 aa10.26□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Ncapd2Q8K2Z4 1392 aa10.26□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Elp1Q7TT37 1333 aaKnown RBP10.26□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Dzip1Q8BMD2 852 aa10.26□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Rassf8Q8CJ96 419 aa10.26□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 180.1 ms