RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Unc13bQ9Z1N9 1602 aa14.86□□□□□ -0.03
Ufd1-201ENSMUST00000005394 Ankrd44B2RXR6 993 aa14.85□□□□□ -0.03
Ufd1-201ENSMUST00000005394 Utp14aQ640M1 767 aaKnown RBP14.85□□□□□ -0.03
Ufd1-201ENSMUST00000005394 CenpjQ569L8 1344 aa14.85□□□□□ -0.03
Ufd1-201ENSMUST00000005394 Rnf123Q5XPI3 1314 aa14.85□□□□□ -0.03
Ufd1-201ENSMUST00000005394 NinlQ6ZQ12 1394 aa14.85□□□□□ -0.03
Ufd1-201ENSMUST00000005394 Col14a1Q80X19 1797 aa14.85□□□□□ -0.03
Ufd1-201ENSMUST00000005394 Kdm4aQ8BW72 1064 aa14.85□□□□□ -0.03
Ufd1-201ENSMUST00000005394 Pnma3Q8JZW8 466 aa14.85□□□□□ -0.03
Ufd1-201ENSMUST00000005394 Nwd1A6H603 1563 aa14.85□□□□□ -0.03
Ufd1-201ENSMUST00000005394 Elp1Q7TT37 1333 aaKnown RBP14.85□□□□□ -0.03
Ufd1-201ENSMUST00000005394 Mcm2P97310 904 aa14.84□□□□□ -0.03
Ufd1-201ENSMUST00000005394 Pik3c2aQ61194 1686 aa14.84□□□□□ -0.03
Ufd1-201ENSMUST00000005394 Rasa1E9PYG6 1038 aa14.84□□□□□ -0.03
Ufd1-201ENSMUST00000005394 Cnga1P29974 684 aa14.84□□□□□ -0.03
Ufd1-201ENSMUST00000005394 Erich6bQ9D4S6 220 aa14.84□□□□□ -0.03
Ufd1-201ENSMUST00000005394 Nek4Q9Z1J2 792 aa14.84□□□□□ -0.03
Ufd1-201ENSMUST00000005394 Lrrc7Q80TE7 1490 aa14.83□□□□□ -0.03
Ufd1-201ENSMUST00000005394 Q3UPC7 1272 aa14.83□□□□□ -0.04
Ufd1-201ENSMUST00000005394 Nyap1Q6PFX7 833 aa14.83□□□□□ -0.04
Ufd1-201ENSMUST00000005394 Rps6ka5Q8C050 863 aa14.83□□□□□ -0.04
Ufd1-201ENSMUST00000005394 Slc5a4bQ91ZP4 660 aa14.83□□□□□ -0.04
Ufd1-201ENSMUST00000005394 CarsQ9ER72 831 aaKnown RBP14.83□□□□□ -0.04
Ufd1-201ENSMUST00000005394 TimelessQ9R1X4 1197 aa14.83□□□□□ -0.04
Ufd1-201ENSMUST00000005394 NcapgE9PWG6 1004 aa14.82□□□□□ -0.04
Ufd1-201ENSMUST00000005394 Cavin2Q63918 418 aaKnown RBP14.82□□□□□ -0.04
Ufd1-201ENSMUST00000005394 Gcc1Q9D4H2 778 aa14.82□□□□□ -0.04
Ufd1-201ENSMUST00000005394 Cps1Q8C196 1500 aa14.82□□□□□ -0.04
Ufd1-201ENSMUST00000005394 Qtrt2B8ZXI1 415 aa14.82□□□□□ -0.04
Ufd1-201ENSMUST00000005394 PtmaP26350 111 aa14.82□□□□□ -0.04
Ufd1-201ENSMUST00000005394 Ppip5k2Q6ZQB6 1129 aa14.82□□□□□ -0.04
Ufd1-201ENSMUST00000005394 Cdk12Q14AX6 1484 aaKnown RBP14.81□□□□□ -0.04
Ufd1-201ENSMUST00000005394 Trim27Q62158 513 aa14.81□□□□□ -0.04
Ufd1-201ENSMUST00000005394 Tbc1d31Q6NXY1 996 aa14.81□□□□□ -0.04
Ufd1-201ENSMUST00000005394 Plekhm2Q80TQ5 1018 aa14.81□□□□□ -0.04
Ufd1-201ENSMUST00000005394 Swt1Q9DBQ9 907 aa14.81□□□□□ -0.04
Ufd1-201ENSMUST00000005394 Nsd3Q6P2L6 1439 aa14.8□□□□□ -0.04
Ufd1-201ENSMUST00000005394 Gm45140A0A0N4SUM8 220 aa14.8□□□□□ -0.04
Ufd1-201ENSMUST00000005394 Gzf1Q4VBD9 706 aa14.8□□□□□ -0.04
Ufd1-201ENSMUST00000005394 NalcnQ8BXR5 1738 aa14.8□□□□□ -0.04
Ufd1-201ENSMUST00000005394 Gm10563F6WIE4 79 aa14.8□□□□□ -0.04
Ufd1-201ENSMUST00000005394 Stag3O70576 1240 aa14.8□□□□□ -0.04
Ufd1-201ENSMUST00000005394 Mindy4Q3UQI9 744 aa14.8□□□□□ -0.04
Ufd1-201ENSMUST00000005394 HnrnpuQ8VEK3 800 aaKnown RBP14.8□□□□□ -0.04
Ufd1-201ENSMUST00000005394 Dmrtc1Q9D9R7 182 aa14.8□□□□□ -0.04
Ufd1-201ENSMUST00000005394 Fbln2P37889 1221 aa14.79□□□□□ -0.04
Ufd1-201ENSMUST00000005394 Gm9992B2RWK3 458 aa14.78□□□□□ -0.04
Ufd1-201ENSMUST00000005394 Wdr78E9PYY5 807 aa14.78□□□□□ -0.04
Ufd1-201ENSMUST00000005394 Vamp4O70480 141 aa14.78□□□□□ -0.04
Ufd1-201ENSMUST00000005394 Nucb1Q02819 459 aaKnown RBP14.78□□□□□ -0.04
Ufd1-201ENSMUST00000005394 Q3UJC8 639 aa14.78□□□□□ -0.04
Ufd1-201ENSMUST00000005394 Unc93aQ710D3 458 aa14.78□□□□□ -0.04
Ufd1-201ENSMUST00000005394 IqubQ8CDK3 788 aa14.78□□□□□ -0.04
Ufd1-201ENSMUST00000005394 Aldh1l2Q8K009 923 aa14.78□□□□□ -0.04
Ufd1-201ENSMUST00000005394 Q4VA45 678 aa14.78□□□□□ -0.04
Ufd1-201ENSMUST00000005394 Tbc1d30Q69ZT9 766 aa14.78□□□□□ -0.04
Ufd1-201ENSMUST00000005394 Mrps27Q8BK72 415 aaKnown RBP14.78□□□□□ -0.04
Ufd1-201ENSMUST00000005394 Ppp6r3Q922D4 844 aa14.78□□□□□ -0.04
Ufd1-201ENSMUST00000005394 Cyp27a1Q9DBG1 533 aa14.78□□□□□ -0.04
Ufd1-201ENSMUST00000005394 Rcan3Q9JKK0 239 aa14.78□□□□□ -0.04
Ufd1-201ENSMUST00000005394 C3P01027 1663 aa14.77□□□□□ -0.04
Ufd1-201ENSMUST00000005394 Zdhhc9P59268 364 aa14.77□□□□□ -0.04
Ufd1-201ENSMUST00000005394 Eif4g2Q62448 906 aaKnown RBP14.77□□□□□ -0.04
Ufd1-201ENSMUST00000005394 Anp32cQ64G17 123 aa14.77□□□□□ -0.04
Ufd1-201ENSMUST00000005394 Znf330Q922H9 316 aa14.77□□□□□ -0.04
Ufd1-201ENSMUST00000005394 Zscan25B2RX31 543 aa14.76□□□□□ -0.05
Ufd1-201ENSMUST00000005394 Aplp1Q03157 653 aa14.76□□□□□ -0.05
Ufd1-201ENSMUST00000005394 GorabQ8BRM2 368 aa14.76□□□□□ -0.05
Ufd1-201ENSMUST00000005394 Kif20bQ80WE4 1774 aaKnown RBP14.76□□□□□ -0.05
Ufd1-201ENSMUST00000005394 Kif3aP28741 701 aa14.76□□□□□ -0.05
Ufd1-201ENSMUST00000005394 Zfp91Q62511 572 aa14.76□□□□□ -0.05
Ufd1-201ENSMUST00000005394 Ccdc173A0JLY1 547 aa14.75□□□□□ -0.05
Ufd1-201ENSMUST00000005394 Pik3c2bE9QAN8 1632 aa14.75□□□□□ -0.05
Ufd1-201ENSMUST00000005394 Cep170bQ80U49 1574 aa14.75□□□□□ -0.05
Ufd1-201ENSMUST00000005394 Rreb1Q3UH06 1700 aaKnown RBP14.74□□□□□ -0.05
Ufd1-201ENSMUST00000005394 Pdia3P27773 505 aaKnown RBP14.74□□□□□ -0.05
Ufd1-201ENSMUST00000005394 Prdm10Q3UTQ7 1184 aa14.74□□□□□ -0.05
Ufd1-201ENSMUST00000005394 MarsQ68FL6 902 aaKnown RBP14.74□□□□□ -0.05
Ufd1-201ENSMUST00000005394 Ccdc94Q9D6J3 314 aa14.74□□□□□ -0.05
Ufd1-201ENSMUST00000005394 Trim28Q62318 834 aa14.73□□□□□ -0.05
Ufd1-201ENSMUST00000005394 Gripap1Q8VD04 806 aa14.73□□□□□ -0.05
Ufd1-201ENSMUST00000005394 Sos1Q62245 1319 aa14.73□□□□□ -0.05
Ufd1-201ENSMUST00000005394 Kif4P33174 1231 aa14.73□□□□□ -0.05
Ufd1-201ENSMUST00000005394 Pank2Q3U4S0 443 aa14.73□□□□□ -0.05
Ufd1-201ENSMUST00000005394 Cdc37l1Q9CZP7 335 aa14.73□□□□□ -0.05
Ufd1-201ENSMUST00000005394 Gnai1B2RSH2 354 aa14.72□□□□□ -0.05
Ufd1-201ENSMUST00000005394 Tnnt2P50752 301 aa14.72□□□□□ -0.05
Ufd1-201ENSMUST00000005394 Tm6sf1P58749 370 aa14.72□□□□□ -0.05
Ufd1-201ENSMUST00000005394 GnpatP98192 678 aa14.72□□□□□ -0.05
Ufd1-201ENSMUST00000005394 Ddx17Q501J6 650 aaKnown RBP14.72□□□□□ -0.05
Ufd1-201ENSMUST00000005394 Cypt2Q6P924 180 aa14.72□□□□□ -0.05
Ufd1-201ENSMUST00000005394 Gnai3Q9DC51 354 aa14.72□□□□□ -0.05
Ufd1-201ENSMUST00000005394 Kif24Q6NWW5 1356 aa14.71□□□□□ -0.05
Ufd1-201ENSMUST00000005394 Nutm1Q8BHP2 1126 aa14.71□□□□□ -0.05
Ufd1-201ENSMUST00000005394 Fam43aQ8BUP8 424 aa14.71□□□□□ -0.05
Ufd1-201ENSMUST00000005394 Grpel1Q99LP6 217 aa14.71□□□□□ -0.05
Ufd1-201ENSMUST00000005394 Gm45015A0A140LII9 184 aa14.71□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Gm18336A0A140LIU8 765 aa14.71□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Ythdc1E9Q5K9 736 aaKnown RBP14.71□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Sema6bO54951 886 aa14.71□□□□□ -0.06
Retrieved 100 of 22,080 RNA–protein pairs in 31.7 ms