RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 ULK4Q96C45 1275 aa14.24□□□□□ -0.13
CSTF3-202ENST00000431742 TRIM56Q9BRZ2 755 aaKnown RBP14.24□□□□□ -0.13
CSTF3-202ENST00000431742 RMI1Q9H9A7 625 aa14.24□□□□□ -0.13
CSTF3-202ENST00000431742 CYP4F12Q9HCS2 524 aa14.24□□□□□ -0.13
CSTF3-202ENST00000431742 ARFGAP3Q9NP61 516 aa14.24□□□□□ -0.13
CSTF3-202ENST00000431742 SAMD15Q9P1V8 674 aa14.24□□□□□ -0.13
CSTF3-202ENST00000431742 ATXN10Q9UBB4 475 aa14.24□□□□□ -0.13
CSTF3-202ENST00000431742 APOBEC3BQ9UH17 382 aaKnown RBP14.24□□□□□ -0.13
CSTF3-202ENST00000431742 DMGDHQ9UI17 866 aaKnown RBP14.24□□□□□ -0.13
CSTF3-202ENST00000431742 SUFUQ9UMX1 484 aa14.24□□□□□ -0.13
CSTF3-202ENST00000431742 PCYT1BQ9Y5K3 369 aaPredicted RBP14.24□□□□□ -0.13
CSTF3-202ENST00000431742 SLC30A1Q9Y6M5 507 aa14.24□□□□□ -0.13
CSTF3-202ENST00000431742 SPTBN4Q9H254 2564 aa14.24□□□□□ -0.13
CSTF3-202ENST00000431742 ZCWPW2A0A1B0GU75 182 aa14.23□□□□□ -0.13
CSTF3-202ENST00000431742 ESYT3A0FGR9 886 aa14.23□□□□□ -0.13
CSTF3-202ENST00000431742 CHUKO15111 745 aa14.23□□□□□ -0.13
CSTF3-202ENST00000431742 VEGFDO43915 354 aa14.23□□□□□ -0.13
CSTF3-202ENST00000431742 NUAK1O60285 661 aa14.23□□□□□ -0.13
CSTF3-202ENST00000431742 SDC3O75056 442 aa14.23□□□□□ -0.13
CSTF3-202ENST00000431742 MTX2O75431 263 aa14.23□□□□□ -0.13
CSTF3-202ENST00000431742 USP1O94782 785 aa14.23□□□□□ -0.13
CSTF3-202ENST00000431742 GOT2P00505 430 aaKnown RBP14.23□□□□□ -0.13
CSTF3-202ENST00000431742 PRSS56P0CW18 603 aa14.23□□□□□ -0.13
CSTF3-202ENST00000431742 GIMD1P0DJR0 217 aa14.23□□□□□ -0.13
CSTF3-202ENST00000431742 ZNF8P17098 575 aaPredicted RBP14.23□□□□□ -0.13
CSTF3-202ENST00000431742 DGKAP23743 735 aa14.23□□□□□ -0.13
CSTF3-202ENST00000431742 ARCN1P48444 511 aaKnown RBP14.23□□□□□ -0.13
CSTF3-202ENST00000431742 CDKN1CP49918 316 aaPredicted RBP14.23□□□□□ -0.13
CSTF3-202ENST00000431742 ARL4CP56559 192 aa14.23□□□□□ -0.13
CSTF3-202ENST00000431742 CAV1Q03135 178 aa14.23□□□□□ -0.13
CSTF3-202ENST00000431742 BNIP3Q12983 259 aa14.23□□□□□ -0.13
CSTF3-202ENST00000431742 ANKRD20A4Q4UJ75 823 aa14.23□□□□□ -0.13
CSTF3-202ENST00000431742 ZRANB3Q5FWF4 1079 aa14.23□□□□□ -0.13
CSTF3-202ENST00000431742 DNTTIP2Q5QJE6 756 aaKnown RBP14.23□□□□□ -0.13
CSTF3-202ENST00000431742 ZNF648Q5T619 568 aaPredicted RBP14.23□□□□□ -0.13
CSTF3-202ENST00000431742 CASC4Q6P4E1 433 aa14.23□□□□□ -0.13
CSTF3-202ENST00000431742 CES3Q6UWW8 571 aa14.23□□□□□ -0.13
CSTF3-202ENST00000431742 IGDCC3Q8IVU1 814 aa14.23□□□□□ -0.13
CSTF3-202ENST00000431742 OR4L1Q8NH43 312 aa14.23□□□□□ -0.13
CSTF3-202ENST00000431742 LRRC39Q96DD0 335 aa14.23□□□□□ -0.13
CSTF3-202ENST00000431742 CCDC97Q96F63 343 aaPredicted RBP14.23□□□□□ -0.13
CSTF3-202ENST00000431742 STAMBPL1Q96FJ0 436 aa14.23□□□□□ -0.13
CSTF3-202ENST00000431742 FCRL3Q96P31 734 aaPredicted RBP14.23□□□□□ -0.13
CSTF3-202ENST00000431742 EBNA1BP2Q99848 306 aaKnown RBP14.23□□□□□ -0.13
CSTF3-202ENST00000431742 NAT9Q9BTE0 207 aa14.23□□□□□ -0.13
CSTF3-202ENST00000431742 SLC13A1Q9BZW2 595 aa14.23□□□□□ -0.13
CSTF3-202ENST00000431742 PHACTR1Q9C0D0 580 aa14.23□□□□□ -0.13
CSTF3-202ENST00000431742 OR2AG1Q9H205 316 aa14.23□□□□□ -0.13
CSTF3-202ENST00000431742 FAM96AQ9H5X1 160 aa14.23□□□□□ -0.13
CSTF3-202ENST00000431742 CARS2Q9HA77 564 aaKnown RBP14.23□□□□□ -0.13
CSTF3-202ENST00000431742 PLAC1Q9HBJ0 212 aa14.23□□□□□ -0.13
CSTF3-202ENST00000431742 ZDHHC18Q9NUE0 388 aa14.23□□□□□ -0.13
CSTF3-202ENST00000431742 UCKL1Q9NWZ5 548 aa14.23□□□□□ -0.13
CSTF3-202ENST00000431742 TRNAU1APQ9NX07 287 aaKnown RBP14.23□□□□□ -0.13
CSTF3-202ENST00000431742 CRLS1Q9UJA2 301 aa14.23□□□□□ -0.13
CSTF3-202ENST00000431742 TEX264Q9Y6I9 313 aa14.23□□□□□ -0.13
CSTF3-202ENST00000431742 CSNK1G3Q9Y6M4 447 aa14.23□□□□□ -0.13
CSTF3-202ENST00000431742 GOLGA4Q13439 2230 aaKnown RBP14.23□□□□□ -0.13
CSTF3-202ENST00000431742 PCNX2A6NKB5 2137 aa14.23□□□□□ -0.13
CSTF3-202ENST00000431742 AQP9O43315 295 aa14.22□□□□□ -0.13
CSTF3-202ENST00000431742 ASMTLO95671 621 aa14.22□□□□□ -0.13
CSTF3-202ENST00000431742 TNFP01375 233 aa14.22□□□□□ -0.13
CSTF3-202ENST00000431742 PGAM1P18669 254 aa14.22□□□□□ -0.13
CSTF3-202ENST00000431742 ACRV1P26436 265 aa14.22□□□□□ -0.13
CSTF3-202ENST00000431742 GNPDA1P46926 289 aa14.22□□□□□ -0.13
CSTF3-202ENST00000431742 PRAMEP78395 509 aa14.22□□□□□ -0.13
CSTF3-202ENST00000431742 B4GALNT1Q00973 533 aa14.22□□□□□ -0.13
CSTF3-202ENST00000431742 GUCY2DQ02846 1103 aa14.22□□□□□ -0.13
CSTF3-202ENST00000431742 TMEM115Q12893 351 aaPredicted RBP14.22□□□□□ -0.13
CSTF3-202ENST00000431742 SEMA3AQ14563 771 aa14.22□□□□□ -0.13
CSTF3-202ENST00000431742 DBN1Q16643 649 aa14.22□□□□□ -0.13
CSTF3-202ENST00000431742 BBS9Q3SYG4 887 aa14.22□□□□□ -0.13
CSTF3-202ENST00000431742 PYCR3Q53H96 274 aa14.22□□□□□ -0.13
CSTF3-202ENST00000431742 RD3Q7Z3Z2 195 aa14.22□□□□□ -0.13
CSTF3-202ENST00000431742 SERPINA9Q86WD7 417 aa14.22□□□□□ -0.13
CSTF3-202ENST00000431742 GATAD2AQ86YP4 633 aa14.22□□□□□ -0.13
CSTF3-202ENST00000431742 FSTL5Q8N475 847 aaPredicted RBP14.22□□□□□ -0.13
CSTF3-202ENST00000431742 OR6P1Q8NGX9 317 aa14.22□□□□□ -0.13
CSTF3-202ENST00000431742 FBXO25Q8TCJ0 367 aa14.22□□□□□ -0.13
CSTF3-202ENST00000431742 ZNF669Q96BR6 464 aaPredicted RBP14.22□□□□□ -0.13
CSTF3-202ENST00000431742 OR2M4Q96R27 311 aa14.22□□□□□ -0.13
CSTF3-202ENST00000431742 ZCCHC2Q9C0B9 1178 aaKnown RBP14.22□□□□□ -0.13
CSTF3-202ENST00000431742 CLPBQ9H078 707 aa14.22□□□□□ -0.13
CSTF3-202ENST00000431742 ZDHHC3Q9NYG2 299 aa14.22□□□□□ -0.13
CSTF3-202ENST00000431742 MARCH4Q9P2E8 410 aaPredicted RBP14.22□□□□□ -0.13
CSTF3-202ENST00000431742 SPASTQ9UBP0 616 aa14.22□□□□□ -0.13
CSTF3-202ENST00000431742 ST14Q9Y5Y6 855 aa14.22□□□□□ -0.13
CSTF3-202ENST00000431742 MAD1L1Q9Y6D9 718 aa14.22□□□□□ -0.13
CSTF3-202ENST00000431742 RPS6KL1Q9Y6S9 549 aa14.22□□□□□ -0.13
CSTF3-202ENST00000431742 SLC30A4O14863 429 aa14.21□□□□□ -0.13
CSTF3-202ENST00000431742 TM4SF5O14894 197 aa14.21□□□□□ -0.13
CSTF3-202ENST00000431742 FLRT2O43155 660 aa14.21□□□□□ -0.13
CSTF3-202ENST00000431742 SGTAO43765 313 aa14.21□□□□□ -0.13
CSTF3-202ENST00000431742 VAPBO95292 243 aa14.21□□□□□ -0.13
CSTF3-202ENST00000431742 CELA2BP08218 269 aaPredicted RBP14.21□□□□□ -0.13
CSTF3-202ENST00000431742 PAMP19021 973 aa14.21□□□□□ -0.13
CSTF3-202ENST00000431742 ELK3P41970 407 aa14.21□□□□□ -0.13
CSTF3-202ENST00000431742 PLTPP55058 493 aa14.21□□□□□ -0.13
CSTF3-202ENST00000431742 ITIH4Q14624 930 aa14.21□□□□□ -0.13
CSTF3-202ENST00000431742 CRYMQ14894 314 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms