RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 BHLHE22Q8NFJ8 381 aaPredicted RBP5.37□□□□□ -1.55
VAPA-203ENST00000577539 PJA1Q8NG27 643 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 OR10T2Q8NGX3 314 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 JPH3Q8WXH2 748 aaPredicted RBP5.37□□□□□ -1.55
VAPA-203ENST00000577539 GATA6Q92908 595 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 SLC6A18Q96N87 628 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 NR1H4Q96RI1 486 aaPredicted RBP5.37□□□□□ -1.55
VAPA-203ENST00000577539 WNT10AQ9GZT5 417 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 ENTPD7Q9NQZ7 604 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 CCDC167Q9P0B6 97 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 BCAP29Q9UHQ4 241 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 CRYL1Q9Y2S2 319 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 TCAF1Q9Y4C2 921 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 DOCK3Q8IZD9 2030 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 PDE4DIPQ5VU43 2346 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 SHROOM3Q8TF72 1996 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 HAS3O00219 553 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 GRID2O43424 1007 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 PGM3O95394 542 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 ITGB1P05556 798 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 NID1P14543 1247 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 ETS2P15036 469 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 VCLP18206 1134 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 CCNCP24863 283 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 CRABP2P29373 138 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 ARL1P40616 181 aaPredicted RBP5.36□□□□□ -1.55
VAPA-203ENST00000577539 RGS2P41220 211 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 TSPAN7P41732 249 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 PGFP49763 221 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 MTTPP55157 894 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 YWHAHQ04917 246 aaPredicted RBP5.36□□□□□ -1.55
VAPA-203ENST00000577539 ALFQ53S48 1182 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 ZNF789Q5FWF6 425 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 RARS2Q5T160 578 aaKnown RBP5.36□□□□□ -1.55
VAPA-203ENST00000577539 OR52E8Q6IFG1 317 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 PGM2L1Q6PCE3 622 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 RNF111Q6ZNA4 994 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 LIMS2Q7Z4I7 341 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 CLEC14AQ86T13 490 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 C12orf40Q86WS4 652 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 PQLC1Q8N2U9 271 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 TXNDC5Q8NBS9 432 aaKnown RBP5.36□□□□□ -1.55
VAPA-203ENST00000577539 RP9Q8TA86 221 aaKnown RBP5.36□□□□□ -1.55
VAPA-203ENST00000577539 BLOC1S5Q8TDH9 187 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 STYXQ8WUJ0 223 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 KLHDC7BQ96G42 594 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 CNBD2Q96M20 576 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 FCRL5Q96RD9 977 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 CENPKQ9BS16 269 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 MTG1Q9BT17 334 aaPredicted RBP5.36□□□□□ -1.55
VAPA-203ENST00000577539 EMILIN2Q9BXX0 1053 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 MRPL1Q9BYD6 325 aaKnown RBP5.36□□□□□ -1.55
VAPA-203ENST00000577539 IL1RL2Q9HB29 575 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 TRPC7Q9HCX4 862 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 ABCC13Q9NSE7 274 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 GIT1Q9Y2X7 761 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 ZNF281Q9Y2X9 895 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 OR51F1A6NGY5 319 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 KCNU1A8MYU2 1149 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 HHLA1C9JL84 531 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 SLCO1B7G3V0H7 640 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 RGS13O14921 159 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 MATN3O15232 486 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 MAFKO60675 156 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 STAMBPO95630 424 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 AKR1A1P14550 325 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 UQCRBP14927 111 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 ATP6V1B1P15313 513 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 ALOX15P16050 662 aaPredicted RBP5.36□□□□□ -1.55
VAPA-203ENST00000577539 HDCP19113 662 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 ME2P23368 584 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 GLDCP23378 1020 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 ATP5F1P24539 256 aaPredicted RBP5.36□□□□□ -1.55
VAPA-203ENST00000577539 RPL9P32969 192 aaKnown RBP5.36□□□□□ -1.55
VAPA-203ENST00000577539 MAGEA12P43365 314 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 OR1G1P47890 313 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 ZNF135P52742 658 aaPredicted RBP5.36□□□□□ -1.55
VAPA-203ENST00000577539 CDH13P55290 713 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 ERVK-21P61565 698 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 PTK2BQ14289 1009 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 PDK3Q15120 406 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 UPP1Q16831 310 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 KIF19Q2TAC6 998 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 ZC3H12BQ5HYM0 836 aaKnown RBP5.36□□□□□ -1.55
VAPA-203ENST00000577539 RAB41Q5JT25 222 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 MARC1Q5VT66 337 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 AGAP9Q5VTM2 703 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 FAM219BQ5XKK7 198 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 PM20D1Q6GTS8 502 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 IYDQ6PHW0 289 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 SETD3Q86TU7 594 aaPredicted RBP5.36□□□□□ -1.55
VAPA-203ENST00000577539 ARHGAP12Q8IWW6 846 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 NKAPQ8N5F7 415 aaKnown RBP5.36□□□□□ -1.55
VAPA-203ENST00000577539 LZTR1Q8N653 840 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 PAF1Q8N7H5 531 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 CEP70Q8NHQ1 597 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 GABPB2Q8TAK5 448 aaPredicted RBP5.36□□□□□ -1.55
VAPA-203ENST00000577539 RDH11Q8TC12 318 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 PPWD1Q96BP3 646 aaKnown RBP5.36□□□□□ -1.55
VAPA-203ENST00000577539 ACBD6Q9BR61 282 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms