RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 SPINT3P49223 89 aa12.86□□□□□ -0.35
COL5A1-206ENST00000465877 SRP54P61011 504 aaKnown RBP12.86□□□□□ -0.35
COL5A1-206ENST00000465877 RPS6KA1Q15418 735 aa12.86□□□□□ -0.35
COL5A1-206ENST00000465877 TCEA2Q15560 299 aa12.86□□□□□ -0.35
COL5A1-206ENST00000465877 DEFB133Q30KQ1 61 aa12.86□□□□□ -0.35
COL5A1-206ENST00000465877 CCDC157Q569K6 752 aa12.86□□□□□ -0.35
COL5A1-206ENST00000465877 ANKRD20A2Q5SQ80 823 aa12.86□□□□□ -0.35
COL5A1-206ENST00000465877 FAXCQ5TGI0 409 aa12.86□□□□□ -0.35
COL5A1-206ENST00000465877 ANKRD20A1Q5TYW2 823 aa12.86□□□□□ -0.35
COL5A1-206ENST00000465877 ANKRD20A3Q5VUR7 823 aa12.86□□□□□ -0.35
COL5A1-206ENST00000465877 ZCCHC8Q6NZY4 707 aaKnown RBP12.86□□□□□ -0.35
COL5A1-206ENST00000465877 ADAMTSL4Q6UY14 1074 aa12.86□□□□□ -0.35
COL5A1-206ENST00000465877 NRSN1Q8IZ57 195 aa12.86□□□□□ -0.35
COL5A1-206ENST00000465877 SLC35B2Q8TB61 432 aa12.86□□□□□ -0.35
COL5A1-206ENST00000465877 CCDC110Q8TBZ0 833 aa12.86□□□□□ -0.35
COL5A1-206ENST00000465877 CCHCR1Q8TD31 782 aa12.86□□□□□ -0.35
COL5A1-206ENST00000465877 OR1E3Q8WZA6 343 aa12.86□□□□□ -0.35
COL5A1-206ENST00000465877 ANP32BQ92688 251 aaKnown RBP12.86□□□□□ -0.35
COL5A1-206ENST00000465877 SCAMP4Q969E2 229 aa12.86□□□□□ -0.35
COL5A1-206ENST00000465877 PDLIM2Q96JY6 352 aa12.86□□□□□ -0.35
COL5A1-206ENST00000465877 DUSP23Q9BVJ7 150 aa12.86□□□□□ -0.35
COL5A1-206ENST00000465877 FRMD8Q9BZ67 464 aaPredicted RBP12.86□□□□□ -0.35
COL5A1-206ENST00000465877 ZFYVE1Q9HBF4 777 aa12.86□□□□□ -0.35
COL5A1-206ENST00000465877 MAGEE1Q9HCI5 957 aa12.86□□□□□ -0.35
COL5A1-206ENST00000465877 MRPL40Q9NQ50 206 aaKnown RBP12.86□□□□□ -0.35
COL5A1-206ENST00000465877 NFKBIL1Q9UBC1 381 aaPredicted RBP12.86□□□□□ -0.35
COL5A1-206ENST00000465877 SHOC2Q9UQ13 582 aa12.86□□□□□ -0.35
COL5A1-206ENST00000465877 CSNK1G3Q9Y6M4 447 aa12.86□□□□□ -0.35
COL5A1-206ENST00000465877 DGKBQ9Y6T7 804 aa12.86□□□□□ -0.35
COL5A1-206ENST00000465877 LOC285095A0A1B0GVY8 99 aa12.85□□□□□ -0.35
COL5A1-206ENST00000465877 PRSS38A1L453 326 aa12.85□□□□□ -0.35
COL5A1-206ENST00000465877 LMO7DNF2Z398 122 aa12.85□□□□□ -0.35
COL5A1-206ENST00000465877 PDE2AO00408 941 aaPredicted RBP12.85□□□□□ -0.35
COL5A1-206ENST00000465877 TNFRSF10CO14798 259 aa12.85□□□□□ -0.35
COL5A1-206ENST00000465877 GCATO75600 419 aa12.85□□□□□ -0.35
COL5A1-206ENST00000465877 RFPL3O75679 317 aa12.85□□□□□ -0.35
COL5A1-206ENST00000465877 FGF1P05230 155 aa12.85□□□□□ -0.35
COL5A1-206ENST00000465877 HLA-DPA1P20036 260 aa12.85□□□□□ -0.35
COL5A1-206ENST00000465877 SPINK2P20155 84 aa12.85□□□□□ -0.35
COL5A1-206ENST00000465877 GEMP55040 296 aa12.85□□□□□ -0.35
COL5A1-206ENST00000465877 GDF10P55107 478 aa12.85□□□□□ -0.35
COL5A1-206ENST00000465877 DCDC1P59894 354 aa12.85□□□□□ -0.35
COL5A1-206ENST00000465877 DAB2P98082 770 aa12.85□□□□□ -0.35
COL5A1-206ENST00000465877 C1orf61Q13536 156 aa12.85□□□□□ -0.35
COL5A1-206ENST00000465877 ELOCQ15369 112 aa12.85□□□□□ -0.35
COL5A1-206ENST00000465877 SIRPB2Q5JXA9 342 aa12.85□□□□□ -0.35
COL5A1-206ENST00000465877 HENMT1Q5T8I9 393 aaKnown RBP12.85□□□□□ -0.35
COL5A1-206ENST00000465877 CCDC70Q6NSX1 233 aa12.85□□□□□ -0.35
COL5A1-206ENST00000465877 RD3Q7Z3Z2 195 aa12.85□□□□□ -0.35
COL5A1-206ENST00000465877 SLC13A5Q86YT5 568 aaPredicted RBP12.85□□□□□ -0.35
COL5A1-206ENST00000465877 FSTL5Q8N475 847 aaPredicted RBP12.85□□□□□ -0.35
COL5A1-206ENST00000465877 SLC25A41Q8N5S1 370 aa12.85□□□□□ -0.35
COL5A1-206ENST00000465877 ATG4AQ8WYN0 398 aa12.85□□□□□ -0.35
COL5A1-206ENST00000465877 EID2BQ96D98 161 aa12.85□□□□□ -0.35
COL5A1-206ENST00000465877 APOLD1Q96LR9 279 aa12.85□□□□□ -0.35
COL5A1-206ENST00000465877 AGAP2Q99490 1192 aa12.85□□□□□ -0.35
COL5A1-206ENST00000465877 RIOK2Q9BVS4 552 aaKnown RBP12.85□□□□□ -0.35
COL5A1-206ENST00000465877 SCNM1Q9BWG6 230 aa12.85□□□□□ -0.35
COL5A1-206ENST00000465877 CLPBQ9H078 707 aa12.85□□□□□ -0.35
COL5A1-206ENST00000465877 USP29Q9HBJ7 922 aa12.85□□□□□ -0.35
COL5A1-206ENST00000465877 CYP4F12Q9HCS2 524 aa12.85□□□□□ -0.35
COL5A1-206ENST00000465877 KLK13Q9UKR3 277 aa12.85□□□□□ -0.35
COL5A1-206ENST00000465877 PCDHGA1Q9Y5H4 931 aa12.85□□□□□ -0.35
COL5A1-206ENST00000465877 SPO11Q9Y5K1 396 aa12.85□□□□□ -0.35
COL5A1-206ENST00000465877 ACACBO00763 2458 aa12.84□□□□□ -0.35
COL5A1-206ENST00000465877 LY6G6EA0A0G2JKS1 128 aa12.84□□□□□ -0.35
COL5A1-206ENST00000465877 RGSL1A5PLK6 1076 aa12.84□□□□□ -0.35
COL5A1-206ENST00000465877 FADS2P1A8MWK0 482 aa12.84□□□□□ -0.35
COL5A1-206ENST00000465877 ANXA9O76027 345 aa12.84□□□□□ -0.35
COL5A1-206ENST00000465877 CTSEP14091 401 aa12.84□□□□□ -0.35
COL5A1-206ENST00000465877 CKMT2P17540 419 aa12.84□□□□□ -0.35
COL5A1-206ENST00000465877 ACP1P24666 158 aa12.84□□□□□ -0.35
COL5A1-206ENST00000465877 SLC1A5Q15758 541 aa12.84□□□□□ -0.35
COL5A1-206ENST00000465877 C6orf132Q5T0Z8 1188 aa12.84□□□□□ -0.35
COL5A1-206ENST00000465877 DOK6Q6PKX4 331 aa12.84□□□□□ -0.35
COL5A1-206ENST00000465877 ARHGEF18Q6ZSZ5 1173 aa12.84□□□□□ -0.35
COL5A1-206ENST00000465877 TRIM74Q86UV6 250 aa12.84□□□□□ -0.35
COL5A1-206ENST00000465877 NLRP8Q86W28 1048 aa12.84□□□□□ -0.35
COL5A1-206ENST00000465877 CHCHD4Q8N4Q1 142 aa12.84□□□□□ -0.35
COL5A1-206ENST00000465877 FAM71DQ8N9W8 422 aa12.84□□□□□ -0.35
COL5A1-206ENST00000465877 FAM181AQ8N9Y4 354 aa12.84□□□□□ -0.35
COL5A1-206ENST00000465877 PPP1R2P1Q96PQ5 205 aa12.84□□□□□ -0.35
COL5A1-206ENST00000465877 WDR24Q96S15 920 aa12.84□□□□□ -0.35
COL5A1-206ENST00000465877 SRPK1Q96SB4 655 aaKnown RBP12.84□□□□□ -0.35
COL5A1-206ENST00000465877 TMEM121Q9BTD3 319 aa12.84□□□□□ -0.35
COL5A1-206ENST00000465877 FICDQ9BVA6 458 aa12.84□□□□□ -0.35
COL5A1-206ENST00000465877 TLR10Q9BXR5 811 aa12.84□□□□□ -0.35
COL5A1-206ENST00000465877 GPR63Q9BZJ6 419 aa12.84□□□□□ -0.35
COL5A1-206ENST00000465877 CARS2Q9HA77 564 aaKnown RBP12.84□□□□□ -0.35
COL5A1-206ENST00000465877 MOSPD1Q9UJG1 213 aa12.84□□□□□ -0.35
COL5A1-206ENST00000465877 U3KQA8 63 aa12.84□□□□□ -0.35
COL5A1-206ENST00000465877 IGF2RP11717 2491 aa12.84□□□□□ -0.35
COL5A1-206ENST00000465877 MAP1BP46821 2468 aaKnown RBP12.84□□□□□ -0.35
COL5A1-206ENST00000465877 RP1P56715 2156 aa12.83□□□□□ -0.36
COL5A1-206ENST00000465877 C5orf60A6NFR6 353 aa12.83□□□□□ -0.36
COL5A1-206ENST00000465877 TPP1O14773 563 aa12.83□□□□□ -0.36
COL5A1-206ENST00000465877 AURKAO14965 403 aa12.83□□□□□ -0.36
COL5A1-206ENST00000465877 INPP4BO15327 924 aa12.83□□□□□ -0.36
COL5A1-206ENST00000465877 LIASO43766 372 aa12.83□□□□□ -0.36
COL5A1-206ENST00000465877 TNFP01375 233 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms